RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 PPA2Q9H2U2 334 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 B3GAT2Q9NPZ5 323 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 CYSLTR2Q9NS75 346 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 OSGIN1Q9UJX0 560 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 VPREB3Q9UKI3 123 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 MKLN1Q9UL63 735 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 ZDHHC8Q9ULC8 765 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 RCE1Q9Y256 329 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 KCNE3Q9Y6H6 103 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 FAM159BA6NKW6 160 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 AKAP8O43823 692 aaKnown RBP9.59□□□□□ -0.87
HDAC6-233ENST00000489352 STX11O75558 287 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 TOX4O94842 621 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 ZFPL1O95159 310 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 IGHV3-13P01766 116 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 RPS17P08708 135 aaKnown RBP9.59□□□□□ -0.87
HDAC6-233ENST00000489352 GTF2E2P29084 291 aaKnown RBP9.59□□□□□ -0.87
HDAC6-233ENST00000489352 PGM1P36871 562 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 LIPAP38571 399 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 UCP2P55851 309 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 KRTAP10-11P60412 298 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 ERVS71-1P61550 626 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 SLC35A2P78381 396 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 CLCQ05315 142 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 PMS2P3Q13401 168 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 ZMYND11Q15326 602 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 FAM153CQ494X1 144 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 EXOSC6Q5RKV6 272 aaKnown RBP9.59□□□□□ -0.87
HDAC6-233ENST00000489352 MROH9Q5TGP6 573 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 EMBQ6PCB8 327 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 C3orf62Q6ZUJ4 267 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 GPRIN3Q6ZVF9 776 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 NDUFA11Q86Y39 141 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 OR2T6Q8NHC8 308 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 FAM76AQ8TAV0 307 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 C3orf30Q96M34 536 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 ZNF75AQ96N20 296 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 MIOXQ9UGB7 285 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 ZNF225Q9UK10 706 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 SIGLEC9Q9Y336 463 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 DNAH7Q8WXX0 4024 aa9.59□□□□□ -0.87
HDAC6-233ENST00000489352 A0A0U1RQK1 487 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 CENPVL1A0A0U1RR11 272 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 CENPVL3A0A0U1RRI6 287 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 TCRBV9S1A1TA0A576 114 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 CEACAM18A8MTB9 384 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 PGRMC1O00264 195 aaKnown RBP9.58□□□□□ -0.88
HDAC6-233ENST00000489352 AKAP10O43572 662 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 FBXO24O75426 580 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 UGT2B17O75795 530 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 SUPT7LO94864 414 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 UQCRBP14927 111 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 B4GALT1P15291 398 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 EFNA1P20827 205 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-233ENST00000489352 TNFSF4P23510 183 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 HSD17B3P37058 310 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 CCT3P49368 545 aaKnown RBP9.58□□□□□ -0.88
HDAC6-233ENST00000489352 HTR6P50406 440 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 AQP5P55064 265 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 TNFAIP6P98066 277 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-233ENST00000489352 GUCY2DQ02846 1103 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 ZNF718Q3SXZ3 478 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 ZMAT1Q5H9K5 638 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 SLC27A4Q6P1M0 643 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 NLRC3Q7RTR2 1065 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 PTOV1Q86YD1 416 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 LRRC8AQ8IWT6 810 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 KDM8Q8N371 416 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 OR56A1Q8NGH5 318 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 OR1J2Q8NGS2 313 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 OR1J1Q8NGS3 322 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 PBKQ96KB5 322 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 EGLN2Q96KS0 407 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 RHOXF2Q9BQY4 288 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 DCAF16Q9NXF7 216 aa9.58□□□□□ -0.88
HDAC6-233ENST00000489352 CAB39Q9Y376 341 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-233ENST00000489352 IGHV1-69DA0A0B4J2H0 117 aa9.57□□□□□ -0.88
HDAC6-233ENST00000489352 DUXAA6NLW8 204 aa9.57□□□□□ -0.88
HDAC6-233ENST00000489352 DUS4LO95620 317 aaKnown RBP9.57□□□□□ -0.88
HDAC6-233ENST00000489352 AK1P00568 194 aa9.57□□□□□ -0.88
HDAC6-233ENST00000489352 PTHP01270 115 aa9.57□□□□□ -0.88
HDAC6-233ENST00000489352 IGHV1-69P01742 117 aa9.57□□□□□ -0.88
HDAC6-233ENST00000489352 IFNW1P05000 195 aa9.57□□□□□ -0.88
HDAC6-233ENST00000489352 THRBP10828 461 aa9.57□□□□□ -0.88
HDAC6-233ENST00000489352 CCL2P13500 99 aa9.57□□□□□ -0.88
HDAC6-233ENST00000489352 TNFRSF1AP19438 455 aa9.57□□□□□ -0.88
HDAC6-233ENST00000489352 EFNB2P52799 333 aa9.57□□□□□ -0.88
HDAC6-233ENST00000489352 TBC1D28Q2M2D7 210 aa9.57□□□□□ -0.88
HDAC6-233ENST00000489352 CARD17Q5XLA6 110 aa9.57□□□□□ -0.88
HDAC6-233ENST00000489352 C16orf62Q7Z3J2 963 aa9.57□□□□□ -0.88
HDAC6-233ENST00000489352 KLBQ86Z14 1044 aa9.57□□□□□ -0.88
HDAC6-233ENST00000489352 FITM2Q8N6M3 262 aa9.57□□□□□ -0.88
HDAC6-233ENST00000489352 DTX3Q8N9I9 347 aa9.57□□□□□ -0.88
HDAC6-233ENST00000489352 WFDC9Q8NEX5 89 aa9.57□□□□□ -0.88
HDAC6-233ENST00000489352 VPS37AQ8NEZ2 397 aa9.57□□□□□ -0.88
HDAC6-233ENST00000489352 OR8B3Q8NGG8 313 aa9.57□□□□□ -0.88
HDAC6-233ENST00000489352 OR4C13Q8NGP0 309 aa9.57□□□□□ -0.88
HDAC6-233ENST00000489352 NEIL1Q96FI4 390 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-233ENST00000489352 RCC1LQ96I51 464 aaKnown RBP9.57□□□□□ -0.88
HDAC6-233ENST00000489352 OR7D2Q96RA2 312 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms