RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 ARPINQ7Z6K5 226 aa13.8□□□□□ -0.2
GABPA-203ENST00000487266 MEX3DQ86XN8 651 aaKnown RBP13.8□□□□□ -0.2
GABPA-203ENST00000487266 MAPK1IP1LQ8NDC0 245 aa13.8□□□□□ -0.2
GABPA-203ENST00000487266 RBM15BQ8NDT2 890 aaKnown RBP13.8□□□□□ -0.2
GABPA-203ENST00000487266 OR6N1Q8NGY5 312 aa13.8□□□□□ -0.2
GABPA-203ENST00000487266 MAGEE2Q8TD90 523 aaPredicted RBP13.8□□□□□ -0.2
GABPA-203ENST00000487266 ULBP2Q9BZM5 246 aa13.8□□□□□ -0.2
GABPA-203ENST00000487266 SLC19A3Q9BZV2 496 aa13.8□□□□□ -0.2
GABPA-203ENST00000487266 OBP2BQ9NPH6 170 aa13.8□□□□□ -0.2
GABPA-203ENST00000487266 RHCGQ9UBD6 479 aa13.8□□□□□ -0.2
GABPA-203ENST00000487266 ZNF229Q9UJW7 825 aa13.8□□□□□ -0.2
GABPA-203ENST00000487266 A4GNTQ9UNA3 340 aa13.8□□□□□ -0.2
GABPA-203ENST00000487266 ANK3Q12955 4377 aaKnown RBP13.79□□□□□ -0.2
GABPA-203ENST00000487266 ZNF726A6NNF4 738 aa13.79□□□□□ -0.2
GABPA-203ENST00000487266 J3KTA2 159 aa13.79□□□□□ -0.2
GABPA-203ENST00000487266 CXCR6O00574 342 aa13.79□□□□□ -0.2
GABPA-203ENST00000487266 RNF13O43567 381 aa13.79□□□□□ -0.2
GABPA-203ENST00000487266 SNX3O60493 162 aa13.79□□□□□ -0.2
GABPA-203ENST00000487266 LY6G6DO95868 133 aa13.79□□□□□ -0.2
GABPA-203ENST00000487266 IFNA14P01570 189 aa13.79□□□□□ -0.2
GABPA-203ENST00000487266 MT-ND1P03886 318 aa13.79□□□□□ -0.2
GABPA-203ENST00000487266 NCK1P16333 377 aa13.79□□□□□ -0.2
GABPA-203ENST00000487266 CAPZA2P47755 286 aa13.79□□□□□ -0.2
GABPA-203ENST00000487266 CSNK1A1P48729 337 aa13.79□□□□□ -0.2
GABPA-203ENST00000487266 SELENOWP63302 87 aa13.79□□□□□ -0.2
GABPA-203ENST00000487266 NPRL3Q12980 569 aa13.79□□□□□ -0.2
GABPA-203ENST00000487266 CLEC9AQ6UXN8 241 aa13.79□□□□□ -0.2
GABPA-203ENST00000487266 NANOGNBQ7Z5D8 188 aa13.79□□□□□ -0.2
GABPA-203ENST00000487266 MDP1Q86V88 176 aa13.79□□□□□ -0.2
GABPA-203ENST00000487266 FBXL14Q8N1E6 418 aa13.79□□□□□ -0.2
GABPA-203ENST00000487266 DEPDC4Q8N2C3 294 aa13.79□□□□□ -0.2
GABPA-203ENST00000487266 TMEM239Q8WW34 195 aa13.79□□□□□ -0.2
GABPA-203ENST00000487266 TRMT61AQ96FX7 289 aaKnown RBP13.79□□□□□ -0.2
GABPA-203ENST00000487266 BDH2Q9BUT1 245 aa13.79□□□□□ -0.2
GABPA-203ENST00000487266 CBLN4Q9NTU7 201 aa13.79□□□□□ -0.2
GABPA-203ENST00000487266 CRNNQ9UBG3 495 aaPredicted RBP13.79□□□□□ -0.2
GABPA-203ENST00000487266 CSPG4Q6UVK1 2322 aa13.78□□□□□ -0.2
GABPA-203ENST00000487266 TLN2Q9Y4G6 2542 aa13.78□□□□□ -0.2
GABPA-203ENST00000487266 BLOC1S5-TXNDC5H3BN57 136 aa13.78□□□□□ -0.2
GABPA-203ENST00000487266 OR7A10O76100 309 aa13.78□□□□□ -0.2
GABPA-203ENST00000487266 ZNF682O95780 498 aa13.78□□□□□ -0.2
GABPA-203ENST00000487266 SERPINA1P01009 418 aa13.78□□□□□ -0.2
GABPA-203ENST00000487266 IGLV1-44P01699 117 aa13.78□□□□□ -0.2
GABPA-203ENST00000487266 HLA-HP01893 362 aa13.78□□□□□ -0.2
GABPA-203ENST00000487266 F13BP05160 661 aa13.78□□□□□ -0.2
GABPA-203ENST00000487266 GNGT1P63211 74 aa13.78□□□□□ -0.2
GABPA-203ENST00000487266 NAAAQ02083 359 aa13.78□□□□□ -0.2
GABPA-203ENST00000487266 RPL18Q07020 188 aaKnown RBP13.78□□□□□ -0.2
GABPA-203ENST00000487266 VHLLQ6RSH7 139 aa13.78□□□□□ -0.2
GABPA-203ENST00000487266 ANKK1Q8NFD2 765 aa13.78□□□□□ -0.2
GABPA-203ENST00000487266 PRRC1Q96M27 445 aa13.78□□□□□ -0.2
GABPA-203ENST00000487266 EFCAB1Q9HAE3 211 aa13.78□□□□□ -0.2
GABPA-203ENST00000487266 MAN2C1Q9NTJ4 1040 aa13.78□□□□□ -0.2
GABPA-203ENST00000487266 ZNF224Q9NZL3 707 aa13.78□□□□□ -0.2
GABPA-203ENST00000487266 FN1P02751 2386 aaKnown RBP13.78□□□□□ -0.2
GABPA-203ENST00000487266 RNF223E7ERA6 249 aa13.77□□□□□ -0.21
GABPA-203ENST00000487266 IGKV3-15P01624 115 aa13.77□□□□□ -0.21
GABPA-203ENST00000487266 HOXB4P17483 251 aaPredicted RBP13.77□□□□□ -0.21
GABPA-203ENST00000487266 AQP2P41181 271 aa13.77□□□□□ -0.21
GABPA-203ENST00000487266 RBM34P42696 430 aaKnown RBP13.77□□□□□ -0.21
GABPA-203ENST00000487266 PSME3P61289 254 aa13.77□□□□□ -0.21
GABPA-203ENST00000487266 RUNX1T1Q06455 604 aa13.77□□□□□ -0.21
GABPA-203ENST00000487266 ZP4Q12836 540 aa13.77□□□□□ -0.21
GABPA-203ENST00000487266 ZNF544Q6NX49 715 aa13.77□□□□□ -0.21
GABPA-203ENST00000487266 HACD2Q6Y1H2 254 aa13.77□□□□□ -0.21
GABPA-203ENST00000487266 ZNF813Q6ZN06 617 aa13.77□□□□□ -0.21
GABPA-203ENST00000487266 RNF148Q8N7C7 305 aa13.77□□□□□ -0.21
GABPA-203ENST00000487266 MOSPD2Q8NHP6 518 aa13.77□□□□□ -0.21
GABPA-203ENST00000487266 TMEM54Q969K7 222 aa13.77□□□□□ -0.21
GABPA-203ENST00000487266 FBXO17Q96EF6 278 aa13.77□□□□□ -0.21
GABPA-203ENST00000487266 SGTBQ96EQ0 304 aa13.77□□□□□ -0.21
GABPA-203ENST00000487266 HSH2DQ96JZ2 352 aa13.77□□□□□ -0.21
GABPA-203ENST00000487266 LRR1Q96L50 414 aa13.77□□□□□ -0.21
GABPA-203ENST00000487266 HS6ST2Q96MM7 605 aa13.77□□□□□ -0.21
GABPA-203ENST00000487266 HOPXQ9BPY8 73 aaPredicted RBP13.77□□□□□ -0.21
GABPA-203ENST00000487266 KCNS3Q9BQ31 491 aa13.77□□□□□ -0.21
GABPA-203ENST00000487266 KATNB1Q9BVA0 655 aa13.77□□□□□ -0.21
GABPA-203ENST00000487266 GRIP2Q9C0E4 1043 aa13.77□□□□□ -0.21
GABPA-203ENST00000487266 B3GAT2Q9NPZ5 323 aa13.77□□□□□ -0.21
GABPA-203ENST00000487266 ABCD2Q9UBJ2 740 aa13.77□□□□□ -0.21
GABPA-203ENST00000487266 GMNCA6NCL1 334 aa13.76□□□□□ -0.21
GABPA-203ENST00000487266 FFAR1O14842 300 aa13.76□□□□□ -0.21
GABPA-203ENST00000487266 GSTA4O15217 222 aa13.76□□□□□ -0.21
GABPA-203ENST00000487266 SSX4O60224 188 aa13.76□□□□□ -0.21
GABPA-203ENST00000487266 LY6HO94772 140 aa13.76□□□□□ -0.21
GABPA-203ENST00000487266 CRYAAP02489 173 aa13.76□□□□□ -0.21
GABPA-203ENST00000487266 HIST1H2ABP04908 130 aa13.76□□□□□ -0.21
GABPA-203ENST00000487266 HEXAP06865 529 aa13.76□□□□□ -0.21
GABPA-203ENST00000487266 PATE4P0C8F1 98 aa13.76□□□□□ -0.21
GABPA-203ENST00000487266 PGA4P0DJD7 388 aa13.76□□□□□ -0.21
GABPA-203ENST00000487266 PGA3P0DJD8 388 aa13.76□□□□□ -0.21
GABPA-203ENST00000487266 CD79AP11912 226 aa13.76□□□□□ -0.21
GABPA-203ENST00000487266 CBR1P16152 277 aa13.76□□□□□ -0.21
GABPA-203ENST00000487266 MYBPC1Q00872 1141 aa13.76□□□□□ -0.21
GABPA-203ENST00000487266 HGFACQ04756 655 aa13.76□□□□□ -0.21
GABPA-203ENST00000487266 PIGFQ07326 219 aa13.76□□□□□ -0.21
GABPA-203ENST00000487266 C1QTNF12Q5T7M4 302 aa13.76□□□□□ -0.21
GABPA-203ENST00000487266 CBLL1Q75N03 491 aa13.76□□□□□ -0.21
GABPA-203ENST00000487266 HIST3H2AQ7L7L0 130 aa13.76□□□□□ -0.21
GABPA-203ENST00000487266 CPLX4Q7Z7G2 160 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms