RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 OVOL3O00110 214 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 CXCR6O00574 342 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 NME4O00746 187 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 CECR9P0C854 216 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 THRBP10828 461 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 HOXB1P14653 301 aaPredicted RBP11.24□□□□□ -0.61
CHMP3-208ENST00000486404 B4GALT1P15291 398 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 IDH3GP51553 393 aaPredicted RBP11.24□□□□□ -0.61
CHMP3-208ENST00000486404 NUDT6P53370 316 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 SEC24CP53992 1094 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 UGT2B15P54855 530 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 CHRNB3Q05901 458 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 PIN1Q13526 163 aaPredicted RBP11.24□□□□□ -0.61
CHMP3-208ENST00000486404 MELKQ14680 651 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 ZNF813Q6ZN06 617 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 SLC35D2Q76EJ3 337 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 HDDC2Q7Z4H3 204 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 TREML1Q86YW5 311 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 CCDC36Q8IYA8 594 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 PFN4Q8NHR9 129 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 TMEM239Q8WW34 195 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 GEMIN6Q8WXD5 167 aaKnown RBP11.24□□□□□ -0.61
CHMP3-208ENST00000486404 FAM162AQ96A26 154 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 SGTBQ96EQ0 304 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 TXNDC15Q96J42 360 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 LRR1Q96L50 414 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 GRIP2Q9C0E4 1043 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 NELFAQ9H3P2 528 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 RIMS3Q9UJD0 308 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 MED31Q9Y3C7 131 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 BLOC1S5-TXNDC5H3BN57 136 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 ENTPD5O75356 428 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 GMNNO75496 209 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 OR7A10O76100 309 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 RAB36O95755 333 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 CD8AP01732 235 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 IGHV4-39P01824 125 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 MT-ND1P03886 318 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 HEXAP06865 529 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 CD79AP11912 226 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 LSP1P33241 339 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 ARR3P36575 388 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 ACVR1BP36896 505 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 GSK3BP49841 420 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 DAP3P51398 398 aaKnown RBP11.23□□□□□ -0.61
CHMP3-208ENST00000486404 CLRN1P58418 232 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 SNRPD2P62316 118 aaKnown RBP11.23□□□□□ -0.61
CHMP3-208ENST00000486404 GNGT1P63211 74 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 SELENOWP63302 87 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 ST3GAL3Q11203 375 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 C3orf36Q3SXR2 165 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 IFI44LQ53G44 452 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 PHYHD1Q5SRE7 291 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 HACD2Q6Y1H2 254 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 FKBP9P1Q75LS8 142 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 SLC46A3Q7Z3Q1 461 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 NKAIN4Q8IVV8 208 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 SLC15A3Q8IY34 581 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 LRRC17Q8N6Y2 441 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 ZNF566Q969W8 418 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 SMR3AQ99954 134 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 PRSS27Q9BQR3 290 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 SPAG4Q9NPE6 437 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 CR1P17927 2039 aa11.23□□□□□ -0.61
CHMP3-208ENST00000486404 SNX3O60493 162 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 BCL10O95999 233 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 SERPINA1P01009 418 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 IGHG1P01857 330 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 ASAH2BP0C7U1 165 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 CBR1P16152 277 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 PRDX6P30041 224 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 APOBEC3AP31941 199 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-208ENST00000486404 PSME3P61289 254 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 NAAAQ02083 359 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 RPL18Q07020 188 aaKnown RBP11.22□□□□□ -0.61
CHMP3-208ENST00000486404 ZP4Q12836 540 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 GSG1Q2KHT4 349 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 VHLLQ6RSH7 139 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 Q71RC1 249 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-208ENST00000486404 VTCN1Q7Z7D3 282 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 MDP1Q86V88 176 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 CYP4Z1Q86W10 505 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 CIARTQ8N365 385 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-208ENST00000486404 OR4F15Q8NGB8 312 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 OR6X1Q8NH79 312 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 FBXO17Q96EF6 278 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 ZNF837Q96EG3 531 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-208ENST00000486404 HSH2DQ96JZ2 352 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 FOXB1Q99853 325 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 FNDC11Q9BVV2 318 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 MEPEQ9NQ76 525 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-208ENST00000486404 TAS2R5Q9NYW4 299 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 GLTPQ9NZD2 209 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 ADA2Q9NZK5 511 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 GMPR2Q9P2T1 348 aaKnown RBP11.22□□□□□ -0.61
CHMP3-208ENST00000486404 STX18Q9P2W9 335 aaKnown RBP11.22□□□□□ -0.61
CHMP3-208ENST00000486404 CRNNQ9UBG3 495 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-208ENST00000486404 GDF2Q9UK05 429 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-208ENST00000486404 PMF1-BGLAPU3KQ54 211 aa11.22□□□□□ -0.61
CHMP3-208ENST00000486404 NSD1Q96L73 2696 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms