RNA–Protein interactions for RNA: ENST00000485934.1

HDHD3-203, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

TSL 2

Gene HDHD3, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-203ENST00000485934 NDUFB2O95178 105 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 CST1P01037 141 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 F13BP05160 661 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 MAKP20794 623 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 CCKARP32238 428 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 RPL4P36578 427 aaKnown RBP13.55□□□□□ -0.24
HDHD3-203ENST00000485934 GPR4P46093 362 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 OMPP47874 163 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 CSNK1A1P48729 337 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 RAP1BP61224 184 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 RAP1AP62834 184 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 ROR2Q01974 943 aaKnown RBP13.55□□□□□ -0.24
HDHD3-203ENST00000485934 PPA1Q15181 289 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 GABRA6Q16445 453 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 BEX5Q5H9J7 111 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 ANKRD16Q6P6B7 361 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 KLHL17Q6TDP4 642 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 NHLRC1Q6VVB1 395 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 TMEM200AQ86VY9 491 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 ADGRG5Q8IZF4 528 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 GNPDA2Q8TDQ7 276 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 ZC3HAV1LQ96H79 300 aaKnown RBP13.55□□□□□ -0.24
HDHD3-203ENST00000485934 FAM46AQ96IP4 442 aaKnown RBP13.55□□□□□ -0.24
HDHD3-203ENST00000485934 TXNDC15Q96J42 360 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 TNFRSF13CQ96RJ3 184 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 FUZQ9BT04 418 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 EMC6Q9BV81 110 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 ULBP2Q9BZM5 246 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 TXNIPQ9H3M7 391 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 ESRP2Q9H6T0 727 aaKnown RBP13.55□□□□□ -0.24
HDHD3-203ENST00000485934 CRLF2Q9HC73 371 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 RASSF1Q9NS23 344 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 GRHPRQ9UBQ7 328 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 AMDHD2Q9Y303 409 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 SAMHD1Q9Y3Z3 626 aaKnown RBP13.55□□□□□ -0.24
HDHD3-203ENST00000485934 LYVE1Q9Y5Y7 322 aa13.55□□□□□ -0.24
HDHD3-203ENST00000485934 CACNA1CQ13936 2221 aa13.54□□□□□ -0.24
HDHD3-203ENST00000485934 FAM221AA4D161 298 aa13.54□□□□□ -0.24
HDHD3-203ENST00000485934 UNC119BA6NIH7 251 aa13.54□□□□□ -0.24
HDHD3-203ENST00000485934 M0R3G1 203 aa13.54□□□□□ -0.24
HDHD3-203ENST00000485934 AHCYL1O43865 530 aa13.54□□□□□ -0.24
HDHD3-203ENST00000485934 UPK3AO75631 287 aa13.54□□□□□ -0.24
HDHD3-203ENST00000485934 ITGA5P08648 1049 aa13.54□□□□□ -0.24
HDHD3-203ENST00000485934 FPR3P25089 353 aa13.54□□□□□ -0.24
HDHD3-203ENST00000485934 EDNRAP25101 427 aa13.54□□□□□ -0.24
HDHD3-203ENST00000485934 CLRN1P58418 232 aa13.54□□□□□ -0.24
HDHD3-203ENST00000485934 CTXN1P60606 82 aa13.54□□□□□ -0.24
HDHD3-203ENST00000485934 UBE2NP61088 152 aaKnown RBP13.54□□□□□ -0.24
HDHD3-203ENST00000485934 CAMK2DQ13557 499 aa13.54□□□□□ -0.24
HDHD3-203ENST00000485934 ACKR1Q16570 336 aa13.54□□□□□ -0.24
HDHD3-203ENST00000485934 CARD17Q5XLA6 110 aa13.54□□□□□ -0.24
HDHD3-203ENST00000485934 RPL13AP3Q6NVV1 102 aa13.54□□□□□ -0.24
HDHD3-203ENST00000485934 C1orf94Q6P1W5 598 aa13.54□□□□□ -0.24
HDHD3-203ENST00000485934 ASRGL1Q7L266 308 aa13.54□□□□□ -0.24
HDHD3-203ENST00000485934 YTHDF3Q7Z739 585 aaKnown RBP13.54□□□□□ -0.24
HDHD3-203ENST00000485934 PAPD5Q8NDF8 572 aaKnown RBP13.54□□□□□ -0.24
HDHD3-203ENST00000485934 MAGEE2Q8TD90 523 aaPredicted RBP13.54□□□□□ -0.24
HDHD3-203ENST00000485934 RBP7Q96R05 134 aa13.54□□□□□ -0.24
HDHD3-203ENST00000485934 POLDIP3Q9BY77 421 aaKnown RBP13.54□□□□□ -0.24
HDHD3-203ENST00000485934 CLEC4MQ9H2X3 399 aaPredicted RBP13.54□□□□□ -0.24
HDHD3-203ENST00000485934 GPR35Q9HC97 309 aa13.54□□□□□ -0.24
HDHD3-203ENST00000485934 CCM2LQ9NUG4 571 aaPredicted RBP13.54□□□□□ -0.24
HDHD3-203ENST00000485934 GLTPQ9NZD2 209 aa13.54□□□□□ -0.24
HDHD3-203ENST00000485934 POFUT2Q9Y2G5 429 aa13.54□□□□□ -0.24
HDHD3-203ENST00000485934 TRAV27A0A087WT01 109 aa13.53□□□□□ -0.24
HDHD3-203ENST00000485934 ZNF99A8MXY4 864 aaPredicted RBP13.53□□□□□ -0.24
HDHD3-203ENST00000485934 XKRYO14609 159 aa13.53□□□□□ -0.24
HDHD3-203ENST00000485934 PTP4A3O75365 173 aa13.53□□□□□ -0.24
HDHD3-203ENST00000485934 CD14P08571 375 aa13.53□□□□□ -0.24
HDHD3-203ENST00000485934 ACADSP16219 412 aa13.53□□□□□ -0.24
HDHD3-203ENST00000485934 CDH2P19022 906 aaPredicted RBP13.53□□□□□ -0.24
HDHD3-203ENST00000485934 GSTM3P21266 225 aa13.53□□□□□ -0.24
HDHD3-203ENST00000485934 GUCA1AP43080 201 aaPredicted RBP13.53□□□□□ -0.24
HDHD3-203ENST00000485934 LIMS1P48059 325 aa13.53□□□□□ -0.24
HDHD3-203ENST00000485934 RPS6KA3P51812 740 aa13.53□□□□□ -0.24
HDHD3-203ENST00000485934 RPL27P61353 136 aaKnown RBP13.53□□□□□ -0.24
HDHD3-203ENST00000485934 LSM11P83369 360 aaKnown RBP eCLIP13.53□□□□□ -0.24
HDHD3-203ENST00000485934 TSPAN31Q12999 210 aa13.53□□□□□ -0.24
HDHD3-203ENST00000485934 SEC23BQ15437 767 aa13.53□□□□□ -0.24
HDHD3-203ENST00000485934 TAB1Q15750 504 aa13.53□□□□□ -0.24
HDHD3-203ENST00000485934 MICAQ29983 383 aa13.53□□□□□ -0.24
HDHD3-203ENST00000485934 GPR139Q6DWJ6 353 aa13.53□□□□□ -0.24
HDHD3-203ENST00000485934 SMARCD3Q6STE5 483 aa13.53□□□□□ -0.24
HDHD3-203ENST00000485934 DPY19L2P2Q6ZN68 376 aa13.53□□□□□ -0.24
HDHD3-203ENST00000485934 ZER1Q7Z7L7 766 aa13.53□□□□□ -0.24
HDHD3-203ENST00000485934 WFDC8Q8IUA0 241 aa13.53□□□□□ -0.24
HDHD3-203ENST00000485934 OR13C2Q8NGS9 318 aa13.53□□□□□ -0.24
HDHD3-203ENST00000485934 MOSPD2Q8NHP6 518 aa13.53□□□□□ -0.24
HDHD3-203ENST00000485934 RADILQ96JH8 1075 aa13.53□□□□□ -0.24
HDHD3-203ENST00000485934 ALKBH3Q96Q83 286 aaPredicted RBP13.53□□□□□ -0.24
HDHD3-203ENST00000485934 RAB3IPQ96QF0 476 aaPredicted RBP13.53□□□□□ -0.24
HDHD3-203ENST00000485934 SMURF2Q9HAU4 748 aa13.53□□□□□ -0.24
HDHD3-203ENST00000485934 DNAJB9Q9UBS3 223 aa13.53□□□□□ -0.24
HDHD3-203ENST00000485934 SIGLEC7Q9Y286 467 aa13.53□□□□□ -0.24
HDHD3-203ENST00000485934 CDC42EP2O14613 210 aa13.52□□□□□ -0.25
HDHD3-203ENST00000485934 FKBP6O75344 327 aa13.52□□□□□ -0.25
HDHD3-203ENST00000485934 DEAF1O75398 565 aaPredicted RBP13.52□□□□□ -0.25
HDHD3-203ENST00000485934 E2F6O75461 281 aa13.52□□□□□ -0.25
HDHD3-203ENST00000485934 FARS2O95363 451 aaKnown RBP13.52□□□□□ -0.25
HDHD3-203ENST00000485934 IGHMP01871 453 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms