RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 IFNGR2P38484 337 aa10.42□□□□□ -0.74
HPS4-214ENST00000485842 OMPP47874 163 aa10.42□□□□□ -0.74
HPS4-214ENST00000485842 LIMS1P48059 325 aa10.42□□□□□ -0.74
HPS4-214ENST00000485842 DAP3P51398 398 aaKnown RBP10.42□□□□□ -0.74
HPS4-214ENST00000485842 CTXN1P60606 82 aa10.42□□□□□ -0.74
HPS4-214ENST00000485842 RPS4XP62701 263 aaKnown RBP10.42□□□□□ -0.74
HPS4-214ENST00000485842 TAB1Q15750 504 aa10.42□□□□□ -0.74
HPS4-214ENST00000485842 ACKR1Q16570 336 aa10.42□□□□□ -0.74
HPS4-214ENST00000485842 CEACAM16Q2WEN9 425 aa10.42□□□□□ -0.74
HPS4-214ENST00000485842 ZBED5Q49AG3 693 aa10.42□□□□□ -0.74
HPS4-214ENST00000485842 PHYHD1Q5SRE7 291 aa10.42□□□□□ -0.74
HPS4-214ENST00000485842 ZER1Q7Z7L7 766 aa10.42□□□□□ -0.74
HPS4-214ENST00000485842 C20orf196Q8IYI0 205 aa10.42□□□□□ -0.74
HPS4-214ENST00000485842 OR9Q2Q8NGE9 314 aa10.42□□□□□ -0.74
HPS4-214ENST00000485842 OR4C15Q8NGM1 316 aa10.42□□□□□ -0.74
HPS4-214ENST00000485842 OR6X1Q8NH79 312 aa10.42□□□□□ -0.74
HPS4-214ENST00000485842 ASB10Q8WXI3 467 aa10.42□□□□□ -0.74
HPS4-214ENST00000485842 UTP4Q969X6 686 aaKnown RBP10.42□□□□□ -0.74
HPS4-214ENST00000485842 C14orf79Q96F83 325 aa10.42□□□□□ -0.74
HPS4-214ENST00000485842 ADAD1Q96M93 576 aaKnown RBP10.42□□□□□ -0.74
HPS4-214ENST00000485842 POLDIP3Q9BY77 421 aaKnown RBP10.42□□□□□ -0.74
HPS4-214ENST00000485842 ULBP2Q9BZM5 246 aa10.42□□□□□ -0.74
HPS4-214ENST00000485842 NDEL1Q9GZM8 345 aa10.42□□□□□ -0.74
HPS4-214ENST00000485842 OR10A4Q9H209 315 aa10.42□□□□□ -0.74
HPS4-214ENST00000485842 CRLF2Q9HC73 371 aa10.42□□□□□ -0.74
HPS4-214ENST00000485842 GPR35Q9HC97 309 aa10.42□□□□□ -0.74
HPS4-214ENST00000485842 B3GAT2Q9NPZ5 323 aa10.42□□□□□ -0.74
HPS4-214ENST00000485842 SETXQ7Z333 2677 aaKnown RBP10.41□□□□□ -0.74
HPS4-214ENST00000485842 UNC79Q9P2D8 2635 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 ALPK2Q86TB3 2170 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 CCNB2O95067 398 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 IGHG1P01857 330 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 HOXB6P17509 224 aaKnown RBP10.41□□□□□ -0.74
HPS4-214ENST00000485842 CLRN1P58418 232 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 PRPS1P60891 318 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 ARF1P84077 181 aaKnown RBP10.41□□□□□ -0.74
HPS4-214ENST00000485842 TGFBR3Q03167 851 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 FHL1Q13642 323 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 CCNIQ14094 377 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 GABRA6Q16445 453 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 ANKDD1AQ495B1 522 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 HIKESHIQ53FT3 197 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 OR7E24Q6IFN5 339 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 PGBD2Q6P3X8 592 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 HDDC2Q7Z4H3 204 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 NOXO1Q8NFA2 376 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 OR52N5Q8NH56 324 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 FANK1Q8TC84 345 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 ZNF566Q969W8 418 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 GPA33Q99795 319 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 KATNB1Q9BVA0 655 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 TXNIPQ9H3M7 391 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 YY1AP1Q9H869 796 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 IL20RAQ9UHF4 553 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 SIGLEC7Q9Y286 467 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 CENPEQ02224 2701 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 CACNA1DQ01668 2161 aa10.41□□□□□ -0.74
HPS4-214ENST00000485842 CRYBG3Q68DQ2 2970 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 OR5H1A6NKK0 313 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 KLF4O43474 513 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 E2F6O75461 281 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 TIPRLO75663 272 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 NDUFB2O95178 105 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 PGA4P0DJD7 388 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 PGA3P0DJD8 388 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 CRYGSP22914 178 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 FPR3P25089 353 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 ACVR1BP36896 505 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 HMGA2P52926 109 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 IST1P53990 364 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 SH3BGRP55822 239 aaPredicted RBP10.4□□□□□ -0.74
HPS4-214ENST00000485842 RPL27P61353 136 aaKnown RBP10.4□□□□□ -0.74
HPS4-214ENST00000485842 ERVK-25P63136 954 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 MYBPC1Q00872 1141 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 RUNX1T1Q06455 604 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 DAZAP2Q15038 168 aaPredicted RBP10.4□□□□□ -0.74
HPS4-214ENST00000485842 PPA1Q15181 289 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 TAF11Q15544 211 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 TIMM23BQ5SRD1 257 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 ARMC4Q5T2S8 1044 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 KLHL24Q6TFL4 600 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 LINC00471Q8N535 108 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 LRRC75AQ8NAA5 344 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 SYT14Q8NB59 555 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 AQP11Q8NBQ7 271 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 C1orf162Q8NEQ5 155 aaPredicted RBP10.4□□□□□ -0.74
HPS4-214ENST00000485842 OR1K1Q8NGR3 316 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 GNPDA2Q8TDQ7 276 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 HSD17B8Q92506 261 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 TMEM54Q969K7 222 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 SLCO4A1Q96BD0 722 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 MUCL1Q96DR8 90 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 ZNF837Q96EG3 531 aaPredicted RBP10.4□□□□□ -0.74
HPS4-214ENST00000485842 PIK3IP1Q96FE7 263 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 SLC25A44Q96H78 314 aaPredicted RBP10.4□□□□□ -0.74
HPS4-214ENST00000485842 TSPAN32Q96QS1 320 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 SLC17A5Q9NRA2 495 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 CCM2LQ9NUG4 571 aaPredicted RBP10.4□□□□□ -0.74
HPS4-214ENST00000485842 GLTPQ9NZD2 209 aa10.4□□□□□ -0.74
HPS4-214ENST00000485842 ZNF346Q9UL40 294 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms