RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 AHCYP23526 432 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 EDNRAP25101 427 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 CTSSP25774 331 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 EPHA2P29317 976 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 CHRNB4P30926 498 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 SDHAP31040 664 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 GRK5P34947 590 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 OPRM1P35372 400 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 PCYT1AP49585 367 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 SELENOPP49908 381 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 ZNF133P52736 654 aaPredicted RBP5.69□□□□□ -1.5
NCL-209ENST00000484328 RAD23AP54725 363 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 CLDN17P56750 224 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 RPL27P61353 136 aaKnown RBP5.69□□□□□ -1.5
NCL-209ENST00000484328 CDK5Q00535 292 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 PMPCAQ10713 525 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 C1DQ13901 141 aaKnown RBP5.69□□□□□ -1.5
NCL-209ENST00000484328 MELKQ14680 651 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 STK11Q15831 433 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 PGGHGQ32M88 737 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 FBXL19-AS1Q494R0 122 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 TMEM201Q5SNT2 666 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 LPCAT4Q643R3 524 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 GPR139Q6DWJ6 353 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 SLC27A4Q6P1M0 643 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 VWA1Q6PCB0 445 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 TFAP2EQ6VUC0 442 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 ZBTB49Q6ZSB9 765 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 SLC35D2Q76EJ3 337 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 NUFIP2Q7Z417 695 aaKnown RBP5.69□□□□□ -1.5
NCL-209ENST00000484328 HDDC2Q7Z4H3 204 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 GALNT5Q7Z7M9 940 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 MRGPRGQ86SM5 289 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 ADCK1Q86TW2 530 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 IGFN1Q86VF2 1251 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 FJX1Q86VR8 437 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 LIX1LQ8IVB5 337 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 MCEMP1Q8IX19 187 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 ARIH2OSQ8N7S6 290 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 OR2T33Q8NG76 320 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 OR52L1Q8NGH7 329 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 PRR7Q8TB68 274 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 TEX47Q8TBZ9 253 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 MAGEE2Q8TD90 523 aaPredicted RBP5.69□□□□□ -1.5
NCL-209ENST00000484328 RND1Q92730 232 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 STARD4Q96DR4 205 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 SLC25A44Q96H78 314 aaPredicted RBP5.69□□□□□ -1.5
NCL-209ENST00000484328 TXNDC15Q96J42 360 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 SAMD8Q96LT4 415 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 ZNF570Q96NI8 536 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 MBOAT4Q96T53 435 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 KCNK17Q96T54 332 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 PITX2Q99697 317 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 POLDIP3Q9BY77 421 aaKnown RBP5.69□□□□□ -1.5
NCL-209ENST00000484328 LINC00470Q9BZP3 86 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 GRIP2Q9C0E4 1043 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 SLCO5A1Q9H2Y9 848 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 PIGMQ9H3S5 423 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 PLSCR4Q9NRQ2 329 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 TBC1D23Q9NUY8 699 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 MED29Q9NX70 200 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 SMPD3Q9NY59 655 aaPredicted RBP5.69□□□□□ -1.5
NCL-209ENST00000484328 IL20RAQ9UHF4 553 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 ERRFI1Q9UJM3 462 aaPredicted RBP5.69□□□□□ -1.5
NCL-209ENST00000484328 BAIAP2Q9UQB8 552 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 NOSIPQ9Y314 301 aaKnown RBP5.69□□□□□ -1.5
NCL-209ENST00000484328 EMC9Q9Y3B6 208 aa5.69□□□□□ -1.5
NCL-209ENST00000484328 HELZ2Q9BYK8 2649 aaKnown RBP5.69□□□□□ -1.5
NCL-209ENST00000484328 GCN1Q92616 2671 aaKnown RBP5.68□□□□□ -1.5
NCL-209ENST00000484328 LRRK2Q5S007 2527 aa5.68□□□□□ -1.5
NCL-209ENST00000484328 TEX13CA0A0J9YWL9 993 aa5.68□□□□□ -1.5
NCL-209ENST00000484328 SLC35F4A4IF30 521 aa5.68□□□□□ -1.5
NCL-209ENST00000484328 A6NIZ1 184 aa5.68□□□□□ -1.5
NCL-209ENST00000484328 OR6C65A6NJZ3 312 aa5.68□□□□□ -1.5
NCL-209ENST00000484328 H3BN98 237 aa5.68□□□□□ -1.5
NCL-209ENST00000484328 RPL36A-HNRNPH2H7BZ11 118 aa5.68□□□□□ -1.5
NCL-209ENST00000484328 DVL2O14641 736 aa5.68□□□□□ -1.5
NCL-209ENST00000484328 MSTNO14793 375 aa5.68□□□□□ -1.5
NCL-209ENST00000484328 AHCYL1O43865 530 aa5.68□□□□□ -1.5
NCL-209ENST00000484328 SLC43A1O75387 559 aa5.68□□□□□ -1.5
NCL-209ENST00000484328 MRPL33O75394 65 aaKnown RBP5.68□□□□□ -1.5
NCL-209ENST00000484328 BCL10O95999 233 aa5.68□□□□□ -1.5
NCL-209ENST00000484328 ACADSP16219 412 aa5.68□□□□□ -1.5
NCL-209ENST00000484328 CDH2P19022 906 aaPredicted RBP5.68□□□□□ -1.5
NCL-209ENST00000484328 RPL4P36578 427 aaKnown RBP5.68□□□□□ -1.5
NCL-209ENST00000484328 RPS6KA3P51812 740 aa5.68□□□□□ -1.5
NCL-209ENST00000484328 CRISP1P54107 249 aa5.68□□□□□ -1.5
NCL-209ENST00000484328 BIDP55957 195 aa5.68□□□□□ -1.5
NCL-209ENST00000484328 PER3P56645 1201 aa5.68□□□□□ -1.5
NCL-209ENST00000484328 CTXN1P60606 82 aa5.68□□□□□ -1.5
NCL-209ENST00000484328 RAP1BP61224 184 aa5.68□□□□□ -1.5
NCL-209ENST00000484328 RAP1AP62834 184 aa5.68□□□□□ -1.5
NCL-209ENST00000484328 ERVK-25P63136 954 aa5.68□□□□□ -1.5
NCL-209ENST00000484328 SIRPAP78324 504 aa5.68□□□□□ -1.5
NCL-209ENST00000484328 EFNB1P98172 346 aa5.68□□□□□ -1.5
NCL-209ENST00000484328 RUNX1T1Q06455 604 aa5.68□□□□□ -1.5
NCL-209ENST00000484328 SRSF1Q07955 248 aaKnown RBP eCLIP5.68□□□□□ -1.52e-32■■■□□ 16.5
NCL-209ENST00000484328 TOP3AQ13472 1001 aaPredicted RBP5.68□□□□□ -1.5
NCL-209ENST00000484328 KRR1Q13601 381 aaKnown RBP5.68□□□□□ -1.5
NCL-209ENST00000484328 PTGES3Q15185 160 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms