RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 EPHX4Q8IUS5 362 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 UBE2J2Q8N2K1 259 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 C10orf53Q8N6V4 93 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 RBM15BQ8NDT2 890 aaKnown RBP8.77□□□□□ -1.01
CPSF4-213ENST00000484112 PIK3C3Q8NEB9 887 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 HIST1H2ACQ93077 130 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 PYURFQ96I23 114 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 LRR1Q96L50 414 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 NSMCE2Q96MF7 247 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 MUS81Q96NY9 551 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 ZNF385AQ96PM9 386 aaKnown RBP8.77□□□□□ -1.01
CPSF4-213ENST00000484112 TRAF4Q9BUZ4 470 aaPredicted RBP8.77□□□□□ -1.01
CPSF4-213ENST00000484112 FNDC11Q9BVV2 318 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 BEX2Q9BXY8 128 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 BARX1Q9HBU1 254 aaPredicted RBP8.77□□□□□ -1.01
CPSF4-213ENST00000484112 OBP2BQ9NPH6 170 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 ACTR3BQ9P1U1 418 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 B3GAT1Q9P2W7 334 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 STX18Q9P2W9 335 aaKnown RBP8.77□□□□□ -1.01
CPSF4-213ENST00000484112 EGFL7Q9UHF1 273 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 PRSS50Q9UI38 385 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 FAM32AQ9Y421 112 aaKnown RBP8.77□□□□□ -1.01
CPSF4-213ENST00000484112 ENPP4Q9Y6X5 453 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 ABCA1O95477 2261 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 ATRQ13535 2644 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 A0A1W2PRQ8 180 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 NPIPB13A6NJU9 1138 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 CENPBD1B2RD01 187 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 NPIPB4C9JG80 1138 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 ZNF587BE7ETH6 402 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 MS4A18H0YCH9 400 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 RPL36A-HNRNPH2H7BZ11 118 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 PLPP3O14495 311 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 TRAF3IP2O43734 574 aaPredicted RBP8.76□□□□□ -1.01
CPSF4-213ENST00000484112 SLC43A1O75387 559 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 ZNF432O94892 652 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 CD8AP01732 235 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 TSPAN19P0C672 248 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 T-ENOLP0DO92 83 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 HOXB1P14653 301 aaPredicted RBP8.76□□□□□ -1.01
CPSF4-213ENST00000484112 NCK1P16333 377 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 IGHV1-2P23083 117 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 NTF4P34130 210 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 NUDT6P53370 316 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 SMIM11AP58511 58 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 SRSF2Q01130 221 aaKnown RBP8.76□□□□□ -1.01
CPSF4-213ENST00000484112 DGCR6Q14129 220 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 MS4A18Q3C1V0 323 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 KRTAP24-1Q3LI83 254 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 DNAL1Q4LDG9 190 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 DNM1P46Q6ZS02 220 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 TSPYL5Q86VY4 417 aaPredicted RBP8.76□□□□□ -1.01
CPSF4-213ENST00000484112 CDK20Q8IZL9 346 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 RNF148Q8N7C7 305 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 ZNF433Q8N7K0 673 aaPredicted RBP8.76□□□□□ -1.01
CPSF4-213ENST00000484112 ACOT11Q8WXI4 607 aaPredicted RBP8.76□□□□□ -1.01
CPSF4-213ENST00000484112 HTRA1Q92743 480 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 MCUR1Q96AQ8 359 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 ZNF775Q96BV0 537 aaPredicted RBP8.76□□□□□ -1.01
CPSF4-213ENST00000484112 MUCL1Q96DR8 90 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 SGTBQ96EQ0 304 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 DNAJA3Q96EY1 480 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 MOGAT1Q96PD6 335 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 KRCC1Q9NPI7 259 aaPredicted RBP8.76□□□□□ -1.01
CPSF4-213ENST00000484112 MEPEQ9NQ76 525 aaPredicted RBP8.76□□□□□ -1.01
CPSF4-213ENST00000484112 FAIMQ9NVQ4 179 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 CDC42EP3Q9UKI2 254 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 PRR14LQ5THK1 2151 aa8.76□□□□□ -1.01
CPSF4-213ENST00000484112 CIB4A0PJX0 185 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 OR5H1A6NKK0 313 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 ARPC2O15144 300 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 ATP5HO75947 161 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 LYZL6O75951 148 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 KRT33AO76009 404 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 OR7A10O76100 309 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 PRSS23O95084 383 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 STAMBPO95630 424 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 CH25HO95992 272 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 SEMG1P04279 462 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 ADORA3P0DMS8 318 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 FUT1P19526 365 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 TCN1P20061 433 aaPredicted RBP8.75□□□□□ -1.01
CPSF4-213ENST00000484112 TNFRSF1BP20333 461 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 SLC9A3P48764 834 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 RASSF2P50749 326 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 CDH11P55287 796 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 CLDN17P56750 224 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 POU3F1Q03052 451 aaPredicted RBP8.75□□□□□ -1.01
CPSF4-213ENST00000484112 PRKCDQ05655 676 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 TRIM25Q14258 630 aaKnown RBP8.75□□□□□ -1.01
CPSF4-213ENST00000484112 TAF11Q15544 211 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 TMEM249Q2WGJ8 235 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 TSPO2Q5TGU0 170 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 LCN8Q6JVE9 175 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 NIPAL3Q6P499 406 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 CLEC2AQ6UVW9 174 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 NHLRC1Q6VVB1 395 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 RRM2BQ7LG56 351 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 NANOGNBQ7Z5D8 188 aa8.75□□□□□ -1.01
CPSF4-213ENST00000484112 NKAIN4Q8IVV8 208 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms