RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 MYBPHQ13203 477 aa23.6■■□□□ 1.37
SHOX2-204ENST00000483851 ZNF239Q16600 458 aaKnown RBP23.6■■□□□ 1.37
SHOX2-204ENST00000483851 LINC01590Q5TEZ4 76 aa23.6■■□□□ 1.37
SHOX2-204ENST00000483851 LIPKQ5VXJ0 399 aa23.6■■□□□ 1.37
SHOX2-204ENST00000483851 PLEKHG7Q6ZR37 379 aa23.6■■□□□ 1.37
SHOX2-204ENST00000483851 CCDC190Q86UF4 302 aa23.6■■□□□ 1.37
SHOX2-204ENST00000483851 EGFL6Q8IUX8 553 aa23.6■■□□□ 1.37
SHOX2-204ENST00000483851 CLEC1AQ8NC01 280 aa23.6■■□□□ 1.37
SHOX2-204ENST00000483851 ZPLD1Q8TCW7 415 aa23.6■■□□□ 1.37
SHOX2-204ENST00000483851 ZMYND19Q96E35 227 aaPredicted RBP23.6■■□□□ 1.37
SHOX2-204ENST00000483851 MRPL48Q96GC5 212 aaKnown RBP23.6■■□□□ 1.37
SHOX2-204ENST00000483851 MRPS18CQ9Y3D5 142 aaKnown RBP23.6■■□□□ 1.37
SHOX2-204ENST00000483851 A0A1W2PNV4 684 aa23.59■■□□□ 1.37
SHOX2-204ENST00000483851 ISPDA4D126 451 aa23.59■■□□□ 1.37
SHOX2-204ENST00000483851 A6NIZ1 184 aa23.59■■□□□ 1.37
SHOX2-204ENST00000483851 SHISA8B8ZZ34 492 aa23.59■■□□□ 1.37
SHOX2-204ENST00000483851 MS4A18H0YCH9 400 aa23.59■■□□□ 1.37
SHOX2-204ENST00000483851 S100A5P33763 92 aa23.59■■□□□ 1.37
SHOX2-204ENST00000483851 NOVA1P51513 510 aaKnown RBP23.59■■□□□ 1.37
SHOX2-204ENST00000483851 RAP1BP61224 184 aa23.59■■□□□ 1.37
SHOX2-204ENST00000483851 RAP1AP62834 184 aa23.59■■□□□ 1.37
SHOX2-204ENST00000483851 HSF2Q03933 536 aa23.59■■□□□ 1.37
SHOX2-204ENST00000483851 TLE3Q04726 772 aa23.59■■□□□ 1.37
SHOX2-204ENST00000483851 MS4A18Q3C1V0 323 aa23.59■■□□□ 1.37
SHOX2-204ENST00000483851 PXKQ7Z7A4 578 aa23.59■■□□□ 1.37
SHOX2-204ENST00000483851 ATP6V1C2Q8NEY4 427 aa23.59■■□□□ 1.37
SHOX2-204ENST00000483851 SPRYD4Q8WW59 207 aaPredicted RBP23.59■■□□□ 1.37
SHOX2-204ENST00000483851 GNRHR2Q96P88 292 aa23.59■■□□□ 1.37
SHOX2-204ENST00000483851 ALG12Q9BV10 488 aa23.59■■□□□ 1.37
SHOX2-204ENST00000483851 BARHL1Q9BZE3 327 aa23.59■■□□□ 1.37
SHOX2-204ENST00000483851 BABAM2Q9NXR7 383 aa23.59■■□□□ 1.37
SHOX2-204ENST00000483851 DKKL1Q9UK85 242 aa23.59■■□□□ 1.37
SHOX2-204ENST00000483851 SF3B6Q9Y3B4 125 aaKnown RBP23.59■■□□□ 1.37
SHOX2-204ENST00000483851 SEC14L5O43304 696 aa23.58■■□□□ 1.37
SHOX2-204ENST00000483851 SRD5A2P31213 254 aa23.58■■□□□ 1.37
SHOX2-204ENST00000483851 ACVR1BP36896 505 aa23.58■■□□□ 1.37
SHOX2-204ENST00000483851 DAP3P51398 398 aaKnown RBP23.58■■□□□ 1.37
SHOX2-204ENST00000483851 ZNF181Q2M3W8 571 aa23.58■■□□□ 1.37
SHOX2-204ENST00000483851 ZNF227Q86WZ6 799 aa23.58■■□□□ 1.37
SHOX2-204ENST00000483851 LYSMD2Q8IV50 215 aa23.58■■□□□ 1.37
SHOX2-204ENST00000483851 WDFY3Q8IZQ1 3526 aa23.58■■□□□ 1.37
SHOX2-204ENST00000483851 PARP16Q8N5Y8 322 aa23.58■■□□□ 1.37
SHOX2-204ENST00000483851 VSX1Q9NZR4 365 aaPredicted RBP23.58■■□□□ 1.37
SHOX2-204ENST00000483851 FKBP7Q9Y680 259 aa23.58■■□□□ 1.37
SHOX2-204ENST00000483851 ARHGEF9O43307 516 aa23.58■■□□□ 1.36
SHOX2-204ENST00000483851 ZIC3O60481 467 aa23.58■■□□□ 1.36
SHOX2-204ENST00000483851 SERPINI2O75830 405 aa23.58■■□□□ 1.36
SHOX2-204ENST00000483851 MT-ND5P03915 603 aa23.58■■□□□ 1.36
SHOX2-204ENST00000483851 CNR1P21554 472 aa23.58■■□□□ 1.36
SHOX2-204ENST00000483851 ITGA3P26006 1051 aa23.58■■□□□ 1.36
SHOX2-204ENST00000483851 BLVRAP53004 296 aa23.58■■□□□ 1.36
SHOX2-204ENST00000483851 OC90Q02509 493 aaPredicted RBP23.58■■□□□ 1.36
SHOX2-204ENST00000483851 EEF1A1P5Q5VTE0 462 aa23.58■■□□□ 1.36
SHOX2-204ENST00000483851 DNAJA3Q96EY1 480 aa23.58■■□□□ 1.36
SHOX2-204ENST00000483851 TIMP4Q99727 224 aa23.58■■□□□ 1.36
SHOX2-204ENST00000483851 EXOSC4Q9NPD3 245 aaKnown RBP23.58■■□□□ 1.36
SHOX2-204ENST00000483851 MUC6Q6W4X9 2439 aa23.57■■□□□ 1.36
SHOX2-204ENST00000483851 PRSS37A4D1T9 235 aa23.57■■□□□ 1.36
SHOX2-204ENST00000483851 MRPL3P09001 348 aaKnown RBP23.57■■□□□ 1.36
SHOX2-204ENST00000483851 ACTA2P62736 377 aa23.57■■□□□ 1.36
SHOX2-204ENST00000483851 ACTG2P63267 376 aa23.57■■□□□ 1.36
SHOX2-204ENST00000483851 ZNF85Q03923 595 aa23.57■■□□□ 1.36
SHOX2-204ENST00000483851 SYS1Q8N2H4 156 aa23.57■■□□□ 1.36
SHOX2-204ENST00000483851 THAP4Q8WY91 577 aa23.57■■□□□ 1.36
SHOX2-204ENST00000483851 MNTQ99583 582 aa23.57■■□□□ 1.36
SHOX2-204ENST00000483851 COQ7Q99807 217 aa23.57■■□□□ 1.36
SHOX2-204ENST00000483851 PIGQQ9BRB3 760 aa23.57■■□□□ 1.36
SHOX2-204ENST00000483851 UTP23Q9BRU9 249 aaKnown RBP23.57■■□□□ 1.36
SHOX2-204ENST00000483851 TRIM36Q9NQ86 728 aa23.57■■□□□ 1.36
SHOX2-204ENST00000483851 ANKRD10Q9NXR5 420 aa23.57■■□□□ 1.36
SHOX2-204ENST00000483851 LRFN1Q9P244 771 aa23.57■■□□□ 1.36
SHOX2-204ENST00000483851 SSR3Q9UNL2 185 aa23.57■■□□□ 1.36
SHOX2-204ENST00000483851 RPH3AQ9Y2J0 694 aaPredicted RBP23.57■■□□□ 1.36
SHOX2-204ENST00000483851 GABRA5P31644 462 aa23.56■■□□□ 1.36
SHOX2-204ENST00000483851 CD79BP40259 229 aa23.56■■□□□ 1.36
SHOX2-204ENST00000483851 RRADP55042 308 aa23.56■■□□□ 1.36
SHOX2-204ENST00000483851 SOX8P57073 446 aa23.56■■□□□ 1.36
SHOX2-204ENST00000483851 TAS2R43P59537 309 aa23.56■■□□□ 1.36
SHOX2-204ENST00000483851 MARCH9Q86YJ5 346 aa23.56■■□□□ 1.36
SHOX2-204ENST00000483851 SLC35F2Q8IXU6 374 aa23.56■■□□□ 1.36
SHOX2-204ENST00000483851 OR6K6Q8NGW6 343 aa23.56■■□□□ 1.36
SHOX2-204ENST00000483851 MIB2Q96AX9 1013 aa23.56■■□□□ 1.36
SHOX2-204ENST00000483851 JSRP1Q96MG2 331 aaPredicted RBP23.56■■□□□ 1.36
SHOX2-204ENST00000483851 NUAK2Q9H093 628 aa23.56■■□□□ 1.36
SHOX2-204ENST00000483851 A0A1W2PQL4 384 aaPredicted RBP23.56■■□□□ 1.36
SHOX2-204ENST00000483851 PMS2P2O95744 297 aa23.56■■□□□ 1.36
SHOX2-204ENST00000483851 HNRNPCP07910 306 aaKnown RBP eCLIP23.56■■□□□ 1.36
SHOX2-204ENST00000483851 CD53P19397 219 aa23.56■■□□□ 1.36
SHOX2-204ENST00000483851 CD96P40200 585 aa23.56■■□□□ 1.36
SHOX2-204ENST00000483851 DNASE1L1P49184 302 aa23.56■■□□□ 1.36
SHOX2-204ENST00000483851 SLC35A1P78382 337 aa23.56■■□□□ 1.36
SHOX2-204ENST00000483851 OR51L1Q8NGJ5 315 aa23.56■■□□□ 1.36
SHOX2-204ENST00000483851 ZNRF4Q8WWF5 429 aa23.56■■□□□ 1.36
SHOX2-204ENST00000483851 C5orf34Q96MH7 638 aa23.56■■□□□ 1.36
SHOX2-204ENST00000483851 OR5B2Q96R09 309 aa23.56■■□□□ 1.36
SHOX2-204ENST00000483851 TXNL4BQ9NX01 149 aaKnown RBP23.56■■□□□ 1.36
SHOX2-204ENST00000483851 LOC102725191A0A1B0GVB3 256 aa23.55■■□□□ 1.36
SHOX2-204ENST00000483851 CTDSP2O14595 271 aa23.55■■□□□ 1.36
SHOX2-204ENST00000483851 TFP02787 698 aa23.55■■□□□ 1.36
SHOX2-204ENST00000483851 GALP22466 123 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms