RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 HCCSP53701 268 aa12.6□□□□□ -0.39
CLK3-204ENST00000483723 RAP1BP61224 184 aa12.6□□□□□ -0.39
CLK3-204ENST00000483723 RAP1AP62834 184 aa12.6□□□□□ -0.39
CLK3-204ENST00000483723 TGIF1Q15583 401 aa12.6□□□□□ -0.39
CLK3-204ENST00000483723 CDONQ4KMG0 1287 aa12.6□□□□□ -0.39
CLK3-204ENST00000483723 ABHD17BQ5VST6 288 aa12.6□□□□□ -0.39
CLK3-204ENST00000483723 TMPPEQ6ZT21 453 aa12.6□□□□□ -0.39
CLK3-204ENST00000483723 VASH1Q7L8A9 365 aaPredicted RBP12.6□□□□□ -0.39
CLK3-204ENST00000483723 SLC16A9Q7RTY1 509 aa12.6□□□□□ -0.39
CLK3-204ENST00000483723 PM20D2Q8IYS1 436 aa12.6□□□□□ -0.39
CLK3-204ENST00000483723 KDM8Q8N371 416 aa12.6□□□□□ -0.39
CLK3-204ENST00000483723 ZNF511Q8NB15 262 aa12.6□□□□□ -0.39
CLK3-204ENST00000483723 SMAP2Q8WU79 429 aaPredicted RBP12.6□□□□□ -0.39
CLK3-204ENST00000483723 ASB10Q8WXI3 467 aa12.6□□□□□ -0.39
CLK3-204ENST00000483723 KIAA1143Q96AT1 154 aaPredicted RBP12.6□□□□□ -0.39
CLK3-204ENST00000483723 MIB2Q96AX9 1013 aa12.6□□□□□ -0.39
CLK3-204ENST00000483723 TSPAN10Q9H1Z9 355 aaPredicted RBP12.6□□□□□ -0.39
CLK3-204ENST00000483723 SYT4Q9H2B2 425 aa12.6□□□□□ -0.39
CLK3-204ENST00000483723 DEPPQ9NTK1 212 aa12.6□□□□□ -0.39
CLK3-204ENST00000483723 B3GAT1Q9P2W7 334 aa12.6□□□□□ -0.39
CLK3-204ENST00000483723 RPH3AQ9Y2J0 694 aaPredicted RBP12.6□□□□□ -0.39
CLK3-204ENST00000483723 SIRT4Q9Y6E7 314 aaPredicted RBP12.6□□□□□ -0.39
CLK3-204ENST00000483723 A0A0G2JMM0 328 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 A0A1W2PPB8 328 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 A0A1W2PRS3 328 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 SLC22A23A1A5C7 686 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 OR2M5A3KFT3 312 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 LRRC3CA6NJW4 275 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 KIR3DP1A8MWS1 328 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 ZNF670-ZNF695F2Z2N8 137 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 H7C1C5 153 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 SEC14L5O43304 696 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 SERPINI2O75830 405 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 NEURL1O76050 574 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 AKR7A3O95154 331 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 PMS2P2O95744 297 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 LIPCP11150 499 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 SERPINB10P48595 397 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 OR12D2P58182 307 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 B3GALT5-AS1P59052 145 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 LCN6P62502 163 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 RPS25P62851 125 aaKnown RBP12.59□□□□□ -0.39
CLK3-204ENST00000483723 HSF1Q00613 529 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 C19orf57Q0VDD7 668 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 DYNC1I2Q13409 638 aaKnown RBP12.59□□□□□ -0.39
CLK3-204ENST00000483723 TMEM176BQ3YBM2 270 aaPredicted RBP12.59□□□□□ -0.39
CLK3-204ENST00000483723 ZNF684Q5T5D7 378 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 FAM205BPQ63HN1 556 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 TUBA3EQ6PEY2 450 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 OR6K6Q8NGW6 343 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 THAP4Q8WY91 577 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 RELTQ969Z4 430 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 C5orf34Q96MH7 638 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 OR5B2Q96R09 309 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 MNTQ99583 582 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 COQ7Q99807 217 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 NUAK2Q9H093 628 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 TXNL4BQ9NX01 149 aaKnown RBP12.59□□□□□ -0.39
CLK3-204ENST00000483723 CCDC59Q9P031 241 aaKnown RBP12.59□□□□□ -0.39
CLK3-204ENST00000483723 LRFN1Q9P244 771 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 KLHL13Q9P2N7 655 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 COPS3Q9UNS2 423 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 ZFHX2Q9C0A1 2572 aaPredicted RBP12.59□□□□□ -0.39
CLK3-204ENST00000483723 AHCTF1Q8WYP5 2266 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 IGLV1-36A0A0B4J1U3 117 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 A0A1W2PNR3 127 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 METTL15A6NJ78 407 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 FAM171A2A8MVW0 826 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 SLC30A4O14863 429 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 OGG1O15527 345 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 PLPP2O43688 288 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 CELP19835 753 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 NAA10P41227 235 aaPredicted RBP12.59□□□□□ -0.39
CLK3-204ENST00000483723 DAP3P51398 398 aaKnown RBP12.59□□□□□ -0.39
CLK3-204ENST00000483723 NOVA1P51513 510 aaKnown RBP12.59□□□□□ -0.39
CLK3-204ENST00000483723 BLVRAP53004 296 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 OR2B6P58173 313 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 TAS2R43P59537 309 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 ACTA2P62736 377 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 RAC1P63000 192 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 ACTG2P63267 376 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 SLC35A1P78382 337 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 H3F3AP84243 136 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 RUNX1T1Q06455 604 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 FOXO1Q12778 655 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 LYPD4Q6UWN0 246 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 SLC35D2Q76EJ3 337 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 RFLNBQ8N5W9 214 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 ZFP41Q8N8Y5 198 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 C4orf36Q96KX1 117 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 JSRP1Q96MG2 331 aaPredicted RBP12.59□□□□□ -0.39
CLK3-204ENST00000483723 KCNK17Q96T54 332 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 CDADC1Q9BWV3 514 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 TRIM36Q9NQ86 728 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 DLL3Q9NYJ7 618 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 ABI3Q9P2A4 366 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 DKKL1Q9UK85 242 aa12.59□□□□□ -0.39
CLK3-204ENST00000483723 NCKAP5O14513 1909 aa12.58□□□□□ -0.4
CLK3-204ENST00000483723 E9PI62 339 aa12.58□□□□□ -0.4
CLK3-204ENST00000483723 J3QLW9 94 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms