RNA–Protein interactions for RNA: ENST00000483687.5

PCCB-216, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-216ENST00000483687 ZNF385AQ96PM9 386 aaKnown RBP16.91■□□□□ 0.3
PCCB-216ENST00000483687 FN3KQ9H479 309 aa16.91■□□□□ 0.3
PCCB-216ENST00000483687 A6NIZ1 184 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 PRR23D1E9PI22 279 aaPredicted RBP16.9■□□□□ 0.3
PCCB-216ENST00000483687 H7C1C5 153 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 WBP4O75554 376 aaKnown RBP16.9■□□□□ 0.3
PCCB-216ENST00000483687 TGM6O95932 706 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 PRR23D2P0DMB1 279 aaPredicted RBP16.9■□□□□ 0.3
PCCB-216ENST00000483687 FCGR2AP12318 317 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 CDKN2AP42771 156 aaKnown RBP16.9■□□□□ 0.3
PCCB-216ENST00000483687 RAP1BP61224 184 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 LCN6P62502 163 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 RAP1AP62834 184 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 NFATC3Q12968 1075 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 ITGADQ13349 1161 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 RNPS1Q15287 305 aaKnown RBP16.9■□□□□ 0.3
PCCB-216ENST00000483687 FAM205BPQ63HN1 556 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 PLBD1Q6P4A8 553 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 HDDC2Q7Z4H3 204 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 P4HA3Q7Z4N8 544 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 BCDIN3DQ7Z5W3 292 aaKnown RBP16.9■□□□□ 0.3
PCCB-216ENST00000483687 ADCK1Q86TW2 530 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 CD163Q86VB7 1156 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 CPOQ8IVL8 374 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 MCEMP1Q8IX19 187 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 NPEPL1Q8NDH3 523 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 ZNF775Q96BV0 537 aaPredicted RBP16.9■□□□□ 0.3
PCCB-216ENST00000483687 HINT3Q9NQE9 182 aaKnown RBP16.9■□□□□ 0.3
PCCB-216ENST00000483687 CLN6Q9NWW5 311 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 DNAJC27Q9NZQ0 273 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 CLCF1Q9UBD9 225 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 FLVCR1Q9Y5Y0 555 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 MED12LQ86YW9 2145 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 SLC35F4A4IF30 521 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 ZNF726A6NNF4 738 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 FMO3P31513 532 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 RUNX1T1Q06455 604 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 SF3B4Q15427 424 aaKnown RBP eCLIP16.9■□□□□ 0.31e-6■■■■□ 24.6
PCCB-216ENST00000483687 GTF2IRD2BQ6EKJ0 949 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 GTF2IRD2Q86UP8 949 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 ZNF786Q8N393 782 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 ADAD1Q96M93 576 aaKnown RBP16.9■□□□□ 0.3
PCCB-216ENST00000483687 Q96MT0 163 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 MED20Q9H944 212 aa16.9■□□□□ 0.3
PCCB-216ENST00000483687 PRSS37A4D1T9 235 aa16.89■□□□□ 0.29
PCCB-216ENST00000483687 OR6C68A6NDL8 312 aa16.89■□□□□ 0.29
PCCB-216ENST00000483687 FIGNL2A6NMB9 653 aa16.89■□□□□ 0.29
PCCB-216ENST00000483687 KDM4EB2RXH2 506 aaPredicted RBP16.89■□□□□ 0.29
PCCB-216ENST00000483687 ENTPD6O75354 484 aa16.89■□□□□ 0.29
PCCB-216ENST00000483687 RENP00797 406 aa16.89■□□□□ 0.29
PCCB-216ENST00000483687 EDN3P14138 238 aa16.89■□□□□ 0.29
PCCB-216ENST00000483687 GABRA1P14867 456 aa16.89■□□□□ 0.29
PCCB-216ENST00000483687 CAMK2DQ13557 499 aa16.89■□□□□ 0.29
PCCB-216ENST00000483687 SMN1Q16637 294 aaKnown RBP16.89■□□□□ 0.29
PCCB-216ENST00000483687 ACSF3Q4G176 576 aaPredicted RBP16.89■□□□□ 0.29
PCCB-216ENST00000483687 SLC25A30Q5SVS4 291 aa16.89■□□□□ 0.29
PCCB-216ENST00000483687 C6orf141Q5SZD1 244 aa16.89■□□□□ 0.29
PCCB-216ENST00000483687 MEDAGQ5VYS4 303 aa16.89■□□□□ 0.29
PCCB-216ENST00000483687 WDFY1Q8IWB7 410 aa16.89■□□□□ 0.29
PCCB-216ENST00000483687 ZIC4Q8N9L1 334 aa16.89■□□□□ 0.29
PCCB-216ENST00000483687 OR6X1Q8NH79 312 aa16.89■□□□□ 0.29
PCCB-216ENST00000483687 FAM57AQ8TBR7 257 aa16.89■□□□□ 0.29
PCCB-216ENST00000483687 CPT1CQ8TCG5 803 aa16.89■□□□□ 0.29
PCCB-216ENST00000483687 HDAC2Q92769 488 aaKnown RBP16.89■□□□□ 0.29
PCCB-216ENST00000483687 SLC25A44Q96H78 314 aaPredicted RBP16.89■□□□□ 0.29
PCCB-216ENST00000483687 SYT4Q9H2B2 425 aa16.89■□□□□ 0.29
PCCB-216ENST00000483687 RPRD1BQ9NQG5 326 aaKnown RBP16.89■□□□□ 0.29
PCCB-216ENST00000483687 EMC3Q9P0I2 261 aa16.89■□□□□ 0.29
PCCB-216ENST00000483687 H2AFY2Q9P0M6 372 aaPredicted RBP16.89■□□□□ 0.29
PCCB-216ENST00000483687 ING1Q9UK53 422 aaPredicted RBP16.89■□□□□ 0.29
PCCB-216ENST00000483687 RP1L1Q8IWN7 2480 aaPredicted RBP16.88■□□□□ 0.29
PCCB-216ENST00000483687 EPG5Q9HCE0 2579 aa16.88■□□□□ 0.29
PCCB-216ENST00000483687 IGKV3D-15A0A087WSY6 115 aa16.88■□□□□ 0.29
PCCB-216ENST00000483687 GPR171O14626 319 aa16.88■□□□□ 0.29
PCCB-216ENST00000483687 AKAP8O43823 692 aaKnown RBP16.88■□□□□ 0.29
PCCB-216ENST00000483687 WDR1O75083 606 aa16.88■□□□□ 0.29
PCCB-216ENST00000483687 IGHG1P01857 330 aa16.88■□□□□ 0.29
PCCB-216ENST00000483687 TEKQ02763 1124 aa16.88■□□□□ 0.29
PCCB-216ENST00000483687 OCLNQ16625 522 aa16.88■□□□□ 0.29
PCCB-216ENST00000483687 TMEM201Q5SNT2 666 aa16.88■□□□□ 0.29
PCCB-216ENST00000483687 NXNL2Q5VZ03 156 aa16.88■□□□□ 0.29
PCCB-216ENST00000483687 LAIR2Q6ISS4 152 aa16.88■□□□□ 0.29
PCCB-216ENST00000483687 UGT2A3Q6UWM9 527 aa16.88■□□□□ 0.29
PCCB-216ENST00000483687 SYT14Q8NB59 555 aa16.88■□□□□ 0.29
PCCB-216ENST00000483687 BBS1Q8NFJ9 593 aa16.88■□□□□ 0.29
PCCB-216ENST00000483687 OR9Q1Q8NGQ5 310 aa16.88■□□□□ 0.29
PCCB-216ENST00000483687 PTP4A1Q93096 173 aa16.88■□□□□ 0.29
PCCB-216ENST00000483687 ZNF566Q969W8 418 aa16.88■□□□□ 0.29
PCCB-216ENST00000483687 ZNF582Q96NG8 517 aaPredicted RBP16.88■□□□□ 0.29
PCCB-216ENST00000483687 DDOQ99489 341 aa16.88■□□□□ 0.29
PCCB-216ENST00000483687 HCAR1Q9BXC0 346 aa16.88■□□□□ 0.29
PCCB-216ENST00000483687 CLEC4AQ9UMR7 237 aa16.88■□□□□ 0.29
PCCB-216ENST00000483687 DOCK7Q96N67 2140 aa16.88■□□□□ 0.29
PCCB-216ENST00000483687 TRMUO75648 421 aaKnown RBP16.87■□□□□ 0.29
PCCB-216ENST00000483687 DBPQ10586 325 aaPredicted RBP16.87■□□□□ 0.29
PCCB-216ENST00000483687 CARD17Q5XLA6 110 aa16.87■□□□□ 0.29
PCCB-216ENST00000483687 NIPAL3Q6P499 406 aa16.87■□□□□ 0.29
PCCB-216ENST00000483687 RPTNQ6XPR3 784 aa16.87■□□□□ 0.29
PCCB-216ENST00000483687 TUSC5Q8IXB3 177 aa16.87■□□□□ 0.29
PCCB-216ENST00000483687 BPIFB6Q8NFQ5 453 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms