RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 TSPAN7P41732 249 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 AGFG1P52594 562 aaKnown RBP7.4□□□□□ -1.22
SORT1-205ENST00000483508 SLC25A1P53007 311 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 OR10A3P58181 314 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 SIRPAP78324 504 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 HHEXQ03014 270 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 STX4Q12846 297 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 MADCAM1Q13477 382 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 HSPB2Q16082 182 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 PRTGQ2VWP7 1150 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 BTBD16Q32M84 506 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 SLC25A35Q3KQZ1 300 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 TP53I3Q53FA7 332 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 FAM69AQ5T7M9 428 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 KIRREL2Q6UWL6 708 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 ASB18Q6ZVZ8 466 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 NUP54Q7Z3B4 507 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 KCTD20Q7Z5Y7 419 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 ZAR1Q86SH2 424 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 LUZP2Q86TE4 346 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 GLCCI1Q86VQ1 547 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 C17orf82Q86X59 251 aaPredicted RBP7.4□□□□□ -1.22
SORT1-205ENST00000483508 CYB561A3Q8NBI2 242 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 C7orf57Q8NEG2 295 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 C17orf47Q8NEP4 570 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 SLC37A2Q8TED4 501 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 C15orf40Q8WUR7 153 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 SNX33Q8WV41 574 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 LIPHQ8WWY8 451 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 DEDD2Q8WXF8 326 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 RIT1Q92963 219 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 YIPF5Q969M3 257 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 PELI1Q96FA3 418 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 PEX11GQ96HA9 241 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 PTCHD1Q96NR3 888 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 DGAT2Q96PD7 388 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 MNTQ99583 582 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 SLX1AQ9BQ83 275 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 ZPBPQ9BS86 351 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 BEX2Q9BXY8 128 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.4□□□□□ -1.22
SORT1-205ENST00000483508 NMNAT2Q9BZQ4 307 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 PPIL3Q9H2H8 161 aaKnown RBP7.4□□□□□ -1.22
SORT1-205ENST00000483508 PLEKHA1Q9HB21 404 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 GALNT9Q9HCQ5 603 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 ZNF71Q9NQZ8 489 aaPredicted RBP7.4□□□□□ -1.22
SORT1-205ENST00000483508 PRTFDC1Q9NRG1 225 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 PLSCR3Q9NRY6 295 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 PRODH2Q9UF12 536 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 TUBD1Q9UJT1 453 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 MOKQ9UQ07 419 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 IER3IP1Q9Y5U9 82 aa7.4□□□□□ -1.22
SORT1-205ENST00000483508 GCN1Q92616 2671 aaKnown RBP7.39□□□□□ -1.23
SORT1-205ENST00000483508 TRBV2A0A0J9YWF9 115 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 A0A1W2PRG6 482 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 SERINC4A6NH21 518 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 MCIDASD6RGH6 385 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 PRAF2O60831 178 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 CPNE3O75131 537 aaKnown RBP7.39□□□□□ -1.23
SORT1-205ENST00000483508 SNAPC5O75971 98 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 ZNF432O94892 652 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 GLCEO94923 617 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 NSA2O95478 260 aaKnown RBP7.39□□□□□ -1.23
SORT1-205ENST00000483508 ECDO95905 644 aaPredicted RBP7.39□□□□□ -1.23
SORT1-205ENST00000483508 CSTAP01040 98 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 IGKV1D-16P01601 117 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 TCRBP04435 133 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 TACSTD2P09758 323 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 CLUP10909 449 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 ANXA3P12429 323 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 ZNF24P17028 368 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 SPI1P17947 270 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 ATF1P18846 271 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 TCN2P20062 427 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 MAPK3P27361 379 aaPredicted RBP7.39□□□□□ -1.23
SORT1-205ENST00000483508 LCN1P31025 176 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 RPL4P36578 427 aaKnown RBP7.39□□□□□ -1.23
SORT1-205ENST00000483508 MNDAP41218 407 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 HSD17B7P56937 341 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 SCAND1P57086 179 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 AP3S2P59780 193 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 RPS4XP62701 263 aaKnown RBP7.39□□□□□ -1.23
SORT1-205ENST00000483508 MRPS10P82664 201 aaKnown RBP7.39□□□□□ -1.23
SORT1-205ENST00000483508 MC2RQ01718 297 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 FUT7Q11130 342 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 SQSTM1Q13501 440 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 SERTAD2Q14140 314 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 FAM53BQ14153 422 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 DEFB109BQ30KR1 87 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 SLC36A2Q495M3 483 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 EMC4Q5J8M3 183 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 C6orf183Q5T699 404 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 FAM27D1Q5T7N8 215 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 FCRLBQ6BAA4 426 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 WBP2NLQ6ICG8 309 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 IL20RBQ6UXL0 311 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 DGAT2L6Q6ZPD8 337 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 BTN2A1Q7KYR7 527 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 SSX6Q7RTT6 188 aa7.39□□□□□ -1.23
SORT1-205ENST00000483508 FGD2Q7Z6J4 655 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms