RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	LOXL1	Q08397	574 aa	Predicted RBP	1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	ERCC8	Q13216	396 aa		1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	SRSF5	Q13243	272 aa	Known RBP	1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	PLD1	Q13393	1074 aa		1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	CCDC92	Q53HC0	331 aa	Predicted RBP	1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	SLC10A5	Q5PT55	438 aa		1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	BEND3	Q5T5X7	828 aa		1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	H2AFV	Q71UI9	128 aa		1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	STPG2	Q8N412	459 aa		1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	MREG	Q8N565	214 aa		1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	FNDC5	Q8NAU1	212 aa		1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	OR52H1	Q8NGJ2	320 aa		1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	OR1F12	Q8NHA8	337 aa		1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	PELI1	Q96FA3	418 aa		1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	C7orf34	Q96L11	122 aa		1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	DOK1	Q99704	481 aa		1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	RAB34	Q9BZG1	259 aa		1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	DBNDD1	Q9H9R9	158 aa		1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	UGT1A7	Q9HAW7	530 aa		1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	UGT1A10	Q9HAW8	530 aa		1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	UGT1A8	Q9HAW9	530 aa		1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	HMG20A	Q9NP66	347 aa		1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	GIN1	Q9NXP7	522 aa		1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	ZNF230	Q9UIE0	474 aa	Predicted RBP	1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	PIN4	Q9Y237	131 aa	Known RBP	1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	FANCI	Q9NVI1	1328 aa		1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	FBN3	Q75N90	2809 aa		1.29	□□□□□ -2.2
CCNL1-223	ENST00000481173	ANKRD12	Q6UB98	2062 aa		1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	IGLV3-22	A0A075B6J6	115 aa		1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	IGKV1D-13	A0A0B4J2D9	117 aa		1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173		F8WDY8	70 aa		1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	AP2A1	O95782	977 aa		1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	IGKV1-13	P0DP09	117 aa		1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	FOLR1	P15328	257 aa		1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	HMGB2	P26583	209 aa	Known RBP	1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	HTR2A	P28223	471 aa		1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	CCND2	P30279	289 aa		1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	RDX	P35241	583 aa	Known RBP	1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	SLC11A1	P49279	550 aa		1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	TNFRSF17	Q02223	184 aa		1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	DUSP7	Q16829	419 aa		1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	BHLHA15	Q7RTS1	189 aa	Predicted RBP	1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	HDDC3	Q8N4P3	179 aa		1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	MIR7-3HG	Q8N6C7	128 aa		1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	ARL10	Q8N8L6	244 aa		1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	UFD1	Q92890	307 aa		1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	EFHD2	Q96C19	240 aa	Predicted RBP	1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	KCNK16	Q96T55	309 aa		1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	TIMM29	Q9BSF4	260 aa		1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	TUBGCP2	Q9BSJ2	902 aa		1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	LINC00597	Q9H2U6	94 aa		1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	ELOVL3	Q9HB03	270 aa		1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	ZNF391	Q9UJN7	358 aa		1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	PACSIN2	Q9UNF0	486 aa	Predicted RBP	1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	MFHAS1	Q9Y4C4	1052 aa		1.28	□□□□□ -2.2
CCNL1-223	ENST00000481173	LTBP4	Q8N2S1	1624 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	IGKV2-24	A0A0C4DH68	120 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173		A0A1B0GVI7	797 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	KRT87P	A6NCN2	255 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	C16orf90	A8MZG2	172 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	ATP5L	O75964	103 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	SLC25A14	O95258	325 aa	Predicted RBP	1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	GAPDH	P04406	335 aa	Known RBP	1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	OR56A5	P0C7T3	313 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	CALCB	P10092	127 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	ARF4	P18085	180 aa	Predicted RBP	1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	NAMPT	P43490	491 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	C1orf61	Q13536	156 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	POU2AF1	Q16633	256 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	DMRTC1	Q5HYR2	192 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	GALNT17	Q6IS24	598 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	ZNF493	Q6ZR52	646 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	ZSCAN30	Q86W11	494 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	PIANP	Q8IYJ0	282 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	CENPL	Q8N0S6	344 aa	Predicted RBP	1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	GATS	Q8NAP1	163 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	OR10T2	Q8NGX3	314 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	SDR42E1	Q8WUS8	393 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	OSTF1	Q92882	214 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	SGK3	Q96BR1	496 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	ZNF382	Q96SR6	550 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	TEKT3	Q9BXF9	490 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	LY9	Q9HBG7	655 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	HOOK1	Q9UJC3	728 aa	Known RBP	1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	ODF2L	Q9ULJ1	636 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	MEMO1	Q9Y316	297 aa		1.27	□□□□□ -2.21
CCNL1-223	ENST00000481173	PTPRT	O14522	1441 aa		1.26	□□□□□ -2.21
CCNL1-223	ENST00000481173	MSH6	P52701	1360 aa		1.26	□□□□□ -2.21
CCNL1-223	ENST00000481173	SF3B1	O75533	1304 aa	Known RBP eCLIP	1.26	□□□□□ -2.21
CCNL1-223	ENST00000481173		A0A087WZY1	265 aa		1.26	□□□□□ -2.21
CCNL1-223	ENST00000481173	VGLL3	A8MV65	326 aa		1.26	□□□□□ -2.21
CCNL1-223	ENST00000481173		A8MXQ7	604 aa		1.26	□□□□□ -2.21
CCNL1-223	ENST00000481173		F5H6K3	240 aa		1.26	□□□□□ -2.21
CCNL1-223	ENST00000481173	LGALS9	O00182	355 aa		1.26	□□□□□ -2.21
CCNL1-223	ENST00000481173	BTN3A3	O00478	584 aa		1.26	□□□□□ -2.21
CCNL1-223	ENST00000481173	BCAS1	O75363	584 aa	Predicted RBP	1.26	□□□□□ -2.21
CCNL1-223	ENST00000481173	SEC22B	O75396	215 aa		1.26	□□□□□ -2.21
CCNL1-223	ENST00000481173	CCDC130	P13994	396 aa		1.26	□□□□□ -2.21
CCNL1-223	ENST00000481173	IL12A	P29459	219 aa		1.26	□□□□□ -2.21
CCNL1-223	ENST00000481173	CSNK1A1	P48729	337 aa		1.26	□□□□□ -2.21

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms