RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 TMED7Q9Y3B3 224 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 SIT1Q9Y3P8 196 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 SPTY2D1-AS1A0A0U1RR47 76 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 ZC3H12DA2A288 527 aaKnown RBP13.17□□□□□ -0.3
COL20A1-206ENST00000479501 TOR1AO14656 332 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 ZNF749O43361 778 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 CLDN12P56749 244 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 IL13RA1P78552 427 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 KCNAB1Q14722 419 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 TDHQ8IZJ6 230 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 OR6V1Q8N148 313 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 EID2Q8N6I1 236 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 TMEM99Q8N816 258 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 ACBD4Q8NC06 268 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 RCBTB1Q8NDN9 531 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 TMEM106AQ96A25 262 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 OR5B12Q96R08 314 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 FBXL2Q9UKC9 423 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 ZNF850A8MQ14 1090 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 ZNF16P17020 682 aaPredicted RBP13.17□□□□□ -0.3
COL20A1-206ENST00000479501 PCBP3P57721 371 aaKnown RBP13.17□□□□□ -0.3
COL20A1-206ENST00000479501 SORDQ00796 357 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 ZNF709Q8N972 641 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 C16orf52Q8NHV5 167 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 ZBTB8AQ96BR9 441 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 OR6C1Q96RD1 312 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 NRTNQ99748 197 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 BRCA1P38398 1863 aaKnown RBP13.17□□□□□ -0.3
COL20A1-206ENST00000479501 PSME4Q14997 1843 aa13.17□□□□□ -0.3
COL20A1-206ENST00000479501 RAD51DO75771 328 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 C1QBP02746 253 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 LIPCP11150 499 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 FOLR3P41439 243 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 C17orf67Q0P5P2 114 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 C5orf46Q6UWT4 87 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 GPATCH2Q9NW75 528 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 ZNF638Q14966 1978 aaKnown RBP13.16□□□□□ -0.3
COL20A1-206ENST00000479501 A0A1B0GX78 115 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 KNG1P01042 644 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 GLULP15104 373 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 SLC2A5P22732 501 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 GDNFP39905 211 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 CAPZBP47756 277 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 POU3F4P49335 361 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 DCDP81605 110 aaKnown RBP13.16□□□□□ -0.3
COL20A1-206ENST00000479501 RAB11FIP2Q7L804 512 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 VASH1Q7L8A9 365 aaPredicted RBP13.16□□□□□ -0.3
COL20A1-206ENST00000479501 MARCH3Q86UD3 253 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 OR5H2Q8NGV7 314 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 OR10K1Q8NGX5 313 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 STK35Q8TDR2 534 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 RHBDD1Q8TEB9 315 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 SLC41A2Q96JW4 573 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 OR2A14Q96R47 310 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 ELF4Q99607 663 aaPredicted RBP13.16□□□□□ -0.3
COL20A1-206ENST00000479501 NOX4Q9NPH5 578 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 NPFFR2Q9Y5X5 522 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 OTOL1A6NHN0 477 aaPredicted RBP13.16□□□□□ -0.3
COL20A1-206ENST00000479501 GJE1A6NN92 205 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 GLCEO94923 617 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 SRFP11831 508 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 PPP3CBP16298 524 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 GPLD1P80108 840 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 EEF1A2Q05639 463 aaKnown RBP13.16□□□□□ -0.3
COL20A1-206ENST00000479501 GPR50Q13585 617 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 Q499Y3 187 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 NIPAL3Q6P499 406 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 TSSK4Q6SA08 328 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 OPN5Q6U736 354 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 MISPQ8IVT2 679 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 WDR76Q9H967 626 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 NOX1Q9Y5S8 564 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 F5H5K5 113 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 CTSVO60911 334 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 POU2F2P09086 479 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 LTBQ06643 244 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 TPBGQ13641 420 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 FAM53BQ14153 422 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 SLC35D3Q5M8T2 416 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 BCORP1Q8N888 145 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 AGBL5Q8NDL9 886 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 BBS1Q8NFJ9 593 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 LGALS14Q8TCE9 139 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 SFXN2Q96NB2 322 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 NUDT22Q9BRQ3 303 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 HRH4Q9H3N8 390 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 POMT2Q9UKY4 750 aa13.16□□□□□ -0.3
COL20A1-206ENST00000479501 ZFC3H1O60293 1989 aaKnown RBP13.15□□□□□ -0.3
COL20A1-206ENST00000479501 TMEM212A6NML5 194 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 UBL3O95164 117 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 MPIG6BO95866 241 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 HRGP04196 525 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 HOXB3P14651 431 aaPredicted RBP13.15□□□□□ -0.3
COL20A1-206ENST00000479501 LCN10Q6JVE6 187 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 PDCD1LG2Q9BQ51 273 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 NCDNQ9UBB6 729 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 ADAM18Q9Y3Q7 739 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 SURF4O15260 269 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 HLA-DMAP28067 261 aa13.15□□□□□ -0.3
COL20A1-206ENST00000479501 BDKRB2P30411 391 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms