RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 HDGFL3Q9Y3E1 203 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 PCDHGB5Q9Y5G0 923 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 X6R8D5 127 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 MCIDASD6RGH6 385 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 BHLHE40O14503 412 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 OR2T1O43869 369 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 TRAPPC6AO75865 159 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 PPP1R3DO95685 299 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 PMS2P2O95744 297 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 OPN1LWP04000 364 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 ZNF24P17028 368 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 GABRB1P18505 474 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 POU3F2P20265 443 aaPredicted RBP5.95□□□□□ -1.46
USP48-208ENST00000479177 SLC6A6P31641 620 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 GRK5P34947 590 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 SFTPDP35247 375 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 AQP2P41181 271 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 P2RY4P51582 365 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 SMSP52788 366 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 TPD52P55327 224 aaPredicted RBP5.95□□□□□ -1.46
USP48-208ENST00000479177 CDC42P60953 191 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 ISL1P61371 349 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 RPL18Q07020 188 aaKnown RBP5.95□□□□□ -1.46
USP48-208ENST00000479177 CD47Q08722 323 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 MFSD13AQ14CX5 517 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 MAD2L1BPQ15013 274 aaPredicted RBP5.95□□□□□ -1.46
USP48-208ENST00000479177 TOMM20Q15388 145 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 OR7A5Q15622 319 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 INAQ16352 499 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 TMEM176BQ3YBM2 270 aaPredicted RBP5.95□□□□□ -1.46
USP48-208ENST00000479177 ANKDD1AQ495B1 522 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 TMEM236Q5W0B7 351 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 KRT80Q6KB66 452 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 ACSM5Q6NUN0 579 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 SLC27A4Q6P1M0 643 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 UGT2A3Q6UWM9 527 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 GGNQ86UU5 652 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 SIAH3Q8IW03 269 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 ENTHD1Q8IYW4 607 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 LNX2Q8N448 690 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 FAM98AQ8NCA5 519 aaKnown RBP5.95□□□□□ -1.46
USP48-208ENST00000479177 ADPRHL1Q8NDY3 354 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 NBEAQ8NFP9 2946 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 OR2T33Q8NG76 320 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 OR5J2Q8NH18 312 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 MOSPD2Q8NHP6 518 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 SMPDL3BQ92485 455 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 MIB2Q96AX9 1013 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 SLC25A36Q96CQ1 311 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 ADGRG7Q96K78 797 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 KLHL15Q96M94 604 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 OR5B2Q96R09 309 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 APOL4Q9BPW4 351 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 IFT27Q9BW83 186 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 TAPBPLQ9BX59 468 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 PRRG3Q9BZD7 231 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 NDEL1Q9GZM8 345 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 ENKD1Q9H0I2 346 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 ACKR4Q9NPB9 350 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 CHST11Q9NPF2 352 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 PNPLA3Q9NST1 481 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 IMPAD1Q9NX62 359 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 MRPL39Q9NYK5 338 aaKnown RBP5.95□□□□□ -1.46
USP48-208ENST00000479177 ZNF226Q9NYT6 803 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 TUBD1Q9UJT1 453 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 RNF6Q9Y252 685 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 TP53TG5Q9Y2B4 290 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 SLC6A5Q9Y345 797 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 LIPGQ9Y5X9 500 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 HSPE1-MOB4S4R3N1 261 aa5.95□□□□□ -1.46
USP48-208ENST00000479177 KALRNO60229 2985 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 A0A0J9YW62 118 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 A0A1W2PNV4 684 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 GJE1A6NN92 205 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 H0YC42 278 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 PLPP3O14495 311 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 TFECO14948 347 aaPredicted RBP5.94□□□□□ -1.46
USP48-208ENST00000479177 SURF4O15260 269 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 SEC14L5O43304 696 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 DNPH1O43598 174 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 PRKYO43930 277 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 WBP4O75554 376 aaKnown RBP5.94□□□□□ -1.46
USP48-208ENST00000479177 TXNDC12O95881 172 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 IGHG3P01860 377 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 IGHMP01871 453 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 HIST1H2ABP04908 130 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 APEHP13798 732 aaKnown RBP5.94□□□□□ -1.46
USP48-208ENST00000479177 GTF2E2P29084 291 aaKnown RBP5.94□□□□□ -1.46
USP48-208ENST00000479177 PCYT1AP49585 367 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 DIO1P49895 249 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 LHX2P50458 406 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 MLLT10P55197 1068 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 CLDN18P56856 261 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 CLDN20P56880 219 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 OR2B6P58173 313 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 PRPS1P60891 318 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 SNRPGP62308 76 aaKnown RBP5.94□□□□□ -1.46
USP48-208ENST00000479177 SLC35A1P78382 337 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 MYBPC1Q00872 1141 aa5.94□□□□□ -1.46
USP48-208ENST00000479177 IL5RAQ01344 420 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms