RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 MCCC2Q9HCC0 563 aa13.42□□□□□ -0.26
COL16A1-211ENST00000479100 HCFC1P51610 2035 aa13.42□□□□□ -0.26
COL16A1-211ENST00000479100 POLQO75417 2590 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 TEP1Q99973 2627 aaKnown RBP13.41□□□□□ -0.26
COL16A1-211ENST00000479100 TUBAL3A6NHL2 446 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 ANKRD65E5RJM6 399 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 ZNF587BE7ETH6 402 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 M0R3G1 203 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 ZNF432O94892 652 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 CNOT4O95628 575 aaKnown RBP13.41□□□□□ -0.26
COL16A1-211ENST00000479100 GASTP01350 101 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 TSPAN19P0C672 248 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 IGHV1-2P23083 117 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 FPR3P25089 353 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 DAP3P51398 398 aaKnown RBP13.41□□□□□ -0.26
COL16A1-211ENST00000479100 FOXG1P55316 489 aaPredicted RBP13.41□□□□□ -0.26
COL16A1-211ENST00000479100 RPS4XP62701 263 aaKnown RBP13.41□□□□□ -0.26
COL16A1-211ENST00000479100 ERVK-25P63136 954 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 SORDQ00796 357 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 ITGADQ13349 1161 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 FHL1Q13642 323 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 ACKR1Q16570 336 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 SFRP5Q5T4F7 317 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 C1orf94Q6P1W5 598 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 BHLHA15Q7RTS1 189 aaPredicted RBP13.41□□□□□ -0.26
COL16A1-211ENST00000479100 ABHD12BQ7Z5M8 362 aaPredicted RBP13.41□□□□□ -0.26
COL16A1-211ENST00000479100 TMEM179BQ7Z7N9 219 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 WDFY1Q8IWB7 410 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 TMEM123Q8N131 208 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 STEAP2Q8NFT2 490 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 OR10G2Q8NGC3 310 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 FANK1Q8TC84 345 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 ZC3HAV1LQ96H79 300 aaKnown RBP13.41□□□□□ -0.26
COL16A1-211ENST00000479100 ADAD1Q96M93 576 aaKnown RBP13.41□□□□□ -0.26
COL16A1-211ENST00000479100 ALKBH3Q96Q83 286 aaPredicted RBP13.41□□□□□ -0.26
COL16A1-211ENST00000479100 MED18Q9BUE0 208 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 HDHD5Q9BXW7 423 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 POLDIP3Q9BY77 421 aaKnown RBP13.41□□□□□ -0.26
COL16A1-211ENST00000479100 ACTR6Q9GZN1 396 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 DENND2DQ9H6A0 471 aaPredicted RBP13.41□□□□□ -0.26
COL16A1-211ENST00000479100 B3GAT2Q9NPZ5 323 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 ARMC1Q9NVT9 282 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 PDP1Q9P0J1 537 aaPredicted RBP13.41□□□□□ -0.26
COL16A1-211ENST00000479100 MALT1Q9UDY8 824 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 NDRG3Q9UGV2 375 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 IL20RAQ9UHF4 553 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 SIGLEC7Q9Y286 467 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 GPR52Q9Y2T5 361 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 FREM1Q5H8C1 2179 aa13.41□□□□□ -0.26
COL16A1-211ENST00000479100 KLF4O43474 513 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 PTP4A3O75365 173 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 NDUFB2O95178 105 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 IGFBP2P18065 325 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 PSMB1P20618 241 aaKnown RBP13.4□□□□□ -0.26
COL16A1-211ENST00000479100 FASP25445 335 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 CCKARP32238 428 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 PEX19P40855 299 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 GSSP48637 474 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 CSNK1A1P48729 337 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 ARHGDIAP52565 204 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 CLRN1P58418 232 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 KRTAP10-9P60411 292 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 ROR2Q01974 943 aaKnown RBP13.4□□□□□ -0.26
COL16A1-211ENST00000479100 TSPAN31Q12999 210 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 GK3PQ14409 553 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 STK11Q15831 433 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 ZNF770Q6IQ21 691 aaPredicted RBP13.4□□□□□ -0.26
COL16A1-211ENST00000479100 HMBOX1Q6NT76 420 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 AMIGO2Q86SJ2 522 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 C10orf67Q8IYJ2 551 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 ZNF433Q8N7K0 673 aaPredicted RBP13.4□□□□□ -0.26
COL16A1-211ENST00000479100 OR6X1Q8NH79 312 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 ASB10Q8WXI3 467 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 LRTOMTQ8WZ04 291 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 ZNF566Q969W8 418 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 S100PBPQ96BU1 408 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 C14orf79Q96F83 325 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 DUS3LQ96G46 650 aaKnown RBP13.4□□□□□ -0.26
COL16A1-211ENST00000479100 KATNB1Q9BVA0 655 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 LINC00470Q9BZP3 86 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 TXNIPQ9H3M7 391 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 CRIM1Q9NZV1 1036 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 ZNF346Q9UL40 294 aaKnown RBP13.4□□□□□ -0.26
COL16A1-211ENST00000479100 CCDC168Q8NDH2 2452 aa13.4□□□□□ -0.26
COL16A1-211ENST00000479100 SH3D21A4FU49 640 aa13.39□□□□□ -0.27
COL16A1-211ENST00000479100 RAD51DO75771 328 aa13.39□□□□□ -0.27
COL16A1-211ENST00000479100 ITGA5P08648 1049 aa13.39□□□□□ -0.27
COL16A1-211ENST00000479100 FCGR1AP12314 374 aa13.39□□□□□ -0.27
COL16A1-211ENST00000479100 ZNF26P17031 533 aaPredicted RBP13.39□□□□□ -0.27
COL16A1-211ENST00000479100 MPGP29372 298 aa13.39□□□□□ -0.27
COL16A1-211ENST00000479100 ACVR1BP36896 505 aa13.39□□□□□ -0.27
COL16A1-211ENST00000479100 RPL27P61353 136 aaKnown RBP13.39□□□□□ -0.27
COL16A1-211ENST00000479100 ATP6AP1Q15904 470 aa13.39□□□□□ -0.27
COL16A1-211ENST00000479100 PHYHD1Q5SRE7 291 aa13.39□□□□□ -0.27
COL16A1-211ENST00000479100 SMARCD3Q6STE5 483 aa13.39□□□□□ -0.27
COL16A1-211ENST00000479100 THSD4Q6ZMP0 1018 aa13.39□□□□□ -0.27
COL16A1-211ENST00000479100 LINGO2Q7L985 606 aa13.39□□□□□ -0.27
COL16A1-211ENST00000479100 HDDC2Q7Z4H3 204 aa13.39□□□□□ -0.27
COL16A1-211ENST00000479100 C20orf196Q8IYI0 205 aa13.39□□□□□ -0.27
COL16A1-211ENST00000479100 HS3ST5Q8IZT8 346 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms