RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 IQCCQ4KMZ1 466 aa18■□□□□ 0.47
VARS-224ENST00000479051 ALG10Q5BKT4 473 aa18■□□□□ 0.47
VARS-224ENST00000479051 NHLRC1Q6VVB1 395 aa18■□□□□ 0.47
VARS-224ENST00000479051 AQP12AQ8IXF9 295 aa18■□□□□ 0.47
VARS-224ENST00000479051 OR4K5Q8NGD3 323 aa18■□□□□ 0.47
VARS-224ENST00000479051 OR52N5Q8NH56 324 aa18■□□□□ 0.47
VARS-224ENST00000479051 ZNF566Q969W8 418 aa18■□□□□ 0.47
VARS-224ENST00000479051 PLPPR2Q96GM1 343 aa18■□□□□ 0.47
VARS-224ENST00000479051 SLC25A44Q96H78 314 aaPredicted RBP18■□□□□ 0.47
VARS-224ENST00000479051 ULBP2Q9BZM5 246 aa18■□□□□ 0.47
VARS-224ENST00000479051 CRLF2Q9HC73 371 aa18■□□□□ 0.47
VARS-224ENST00000479051 GPR35Q9HC97 309 aa18■□□□□ 0.47
VARS-224ENST00000479051 APCP25054 2843 aa17.99■□□□□ 0.47
VARS-224ENST00000479051 TRBV4-1A0A0J9YWV2 114 aa17.99■□□□□ 0.47
VARS-224ENST00000479051 ACOT8O14734 319 aa17.99■□□□□ 0.47
VARS-224ENST00000479051 GSC2O15499 205 aa17.99■□□□□ 0.47
VARS-224ENST00000479051 KLF4O43474 513 aa17.99■□□□□ 0.47
VARS-224ENST00000479051 WNT11O96014 354 aa17.99■□□□□ 0.47
VARS-224ENST00000479051 IGHG1P01857 330 aa17.99■□□□□ 0.47
VARS-224ENST00000479051 F13BP05160 661 aa17.99■□□□□ 0.47
VARS-224ENST00000479051 PAX7P23759 505 aa17.99■□□□□ 0.47
VARS-224ENST00000479051 MAGEA2P43356 314 aa17.99■□□□□ 0.47
VARS-224ENST00000479051 PRPS1P60891 318 aa17.99■□□□□ 0.47
VARS-224ENST00000479051 MELKQ14680 651 aa17.99■□□□□ 0.47
VARS-224ENST00000479051 CEACAM16Q2WEN9 425 aa17.99■□□□□ 0.47
VARS-224ENST00000479051 PGM2L1Q6PCE3 622 aa17.99■□□□□ 0.47
VARS-224ENST00000479051 KLHL17Q6TDP4 642 aa17.99■□□□□ 0.47
VARS-224ENST00000479051 OR1K1Q8NGR3 316 aa17.99■□□□□ 0.47
VARS-224ENST00000479051 OR51A7Q8NH64 312 aa17.99■□□□□ 0.47
VARS-224ENST00000479051 MOSPD2Q8NHP6 518 aa17.99■□□□□ 0.47
VARS-224ENST00000479051 FAM46AQ96IP4 442 aaKnown RBP17.99■□□□□ 0.47
VARS-224ENST00000479051 ALPK1Q96QP1 1244 aa17.99■□□□□ 0.47
VARS-224ENST00000479051 OBP2BQ9NPH6 170 aa17.99■□□□□ 0.47
VARS-224ENST00000479051 SLC17A5Q9NRA2 495 aa17.99■□□□□ 0.47
VARS-224ENST00000479051 TRAV27A0A087WT01 109 aa17.98■□□□□ 0.47
VARS-224ENST00000479051 SH3PXD2BA1X283 911 aa17.98■□□□□ 0.47
VARS-224ENST00000479051 NPIPB13A6NJU9 1138 aa17.98■□□□□ 0.47
VARS-224ENST00000479051 NPIPB4C9JG80 1138 aa17.98■□□□□ 0.47
VARS-224ENST00000479051 SIAH2O43255 324 aa17.98■□□□□ 0.47
VARS-224ENST00000479051 RAP2AP10114 183 aa17.98■□□□□ 0.47
VARS-224ENST00000479051 CLRN1P58418 232 aa17.98■□□□□ 0.47
VARS-224ENST00000479051 UBE2NP61088 152 aaKnown RBP17.98■□□□□ 0.47
VARS-224ENST00000479051 RPS4XP62701 263 aaKnown RBP17.98■□□□□ 0.47
VARS-224ENST00000479051 LAPTM4AQ15012 233 aa17.98■□□□□ 0.47
VARS-224ENST00000479051 ZBED5Q49AG3 693 aa17.98■□□□□ 0.47
VARS-224ENST00000479051 ANKRD16Q6P6B7 361 aa17.98■□□□□ 0.47
VARS-224ENST00000479051 LINGO2Q7L985 606 aa17.98■□□□□ 0.47
VARS-224ENST00000479051 MEX3DQ86XN8 651 aaKnown RBP17.98■□□□□ 0.47
VARS-224ENST00000479051 OR13C2Q8NGS9 318 aa17.98■□□□□ 0.47
VARS-224ENST00000479051 BOD1Q96IK1 185 aa17.98■□□□□ 0.47
VARS-224ENST00000479051 MMADHCQ9H3L0 296 aaPredicted RBP17.98■□□□□ 0.47
VARS-224ENST00000479051 POFUT2Q9Y2G5 429 aa17.98■□□□□ 0.47
VARS-224ENST00000479051 SLC25A15Q9Y619 301 aa17.98■□□□□ 0.47
VARS-224ENST00000479051 FBN2P35556 2912 aa17.98■□□□□ 0.47
VARS-224ENST00000479051 ZNF99A8MXY4 864 aaPredicted RBP17.97■□□□□ 0.47
VARS-224ENST00000479051 CENPBD1B2RD01 187 aa17.97■□□□□ 0.47
VARS-224ENST00000479051 OR10H3O60404 316 aa17.97■□□□□ 0.47
VARS-224ENST00000479051 CD3EP07766 207 aa17.97■□□□□ 0.47
VARS-224ENST00000479051 NR2C1P13056 603 aa17.97■□□□□ 0.47
VARS-224ENST00000479051 HOXB1P14653 301 aaPredicted RBP17.97■□□□□ 0.47
VARS-224ENST00000479051 OMPP47874 163 aa17.97■□□□□ 0.47
VARS-224ENST00000479051 SEC23BQ15437 767 aa17.97■□□□□ 0.47
VARS-224ENST00000479051 ACKR1Q16570 336 aa17.97■□□□□ 0.47
VARS-224ENST00000479051 TBRG1Q3YBR2 411 aa17.97■□□□□ 0.47
VARS-224ENST00000479051 FAM205BPQ63HN1 556 aa17.97■□□□□ 0.47
VARS-224ENST00000479051 CDH24Q86UP0 819 aa17.97■□□□□ 0.47
VARS-224ENST00000479051 SPATA24Q86W54 205 aa17.97■□□□□ 0.47
VARS-224ENST00000479051 LINC00471Q8N535 108 aa17.97■□□□□ 0.47
VARS-224ENST00000479051 MAGEE2Q8TD90 523 aaPredicted RBP17.97■□□□□ 0.47
VARS-224ENST00000479051 TNFRSF13CQ96RJ3 184 aa17.97■□□□□ 0.47
VARS-224ENST00000479051 CADM1Q9BY67 442 aaKnown RBP17.97■□□□□ 0.47
VARS-224ENST00000479051 TXNIPQ9H3M7 391 aa17.97■□□□□ 0.47
VARS-224ENST00000479051 MOV10Q9HCE1 1003 aaKnown RBP17.97■□□□□ 0.47
VARS-224ENST00000479051 GLTPQ9NZD2 209 aa17.97■□□□□ 0.47
VARS-224ENST00000479051 DHRS12A0PJE2 317 aa17.96■□□□□ 0.47
VARS-224ENST00000479051 TNFRSF11BO00300 401 aa17.96■□□□□ 0.47
VARS-224ENST00000479051 CDC42EP2O14613 210 aa17.96■□□□□ 0.47
VARS-224ENST00000479051 ENTPD5O75356 428 aa17.96■□□□□ 0.47
VARS-224ENST00000479051 RPL4P36578 427 aaKnown RBP17.96■□□□□ 0.47
VARS-224ENST00000479051 CTXN1P60606 82 aa17.96■□□□□ 0.47
VARS-224ENST00000479051 ARF1P84077 181 aaKnown RBP17.96■□□□□ 0.47
VARS-224ENST00000479051 TOP3AQ13472 1001 aaPredicted RBP17.96■□□□□ 0.47
VARS-224ENST00000479051 HIKESHIQ53FT3 197 aa17.96■□□□□ 0.47
VARS-224ENST00000479051 NCMAPQ5T1S8 102 aa17.96■□□□□ 0.47
VARS-224ENST00000479051 TMEM108Q6UXF1 575 aa17.96■□□□□ 0.47
VARS-224ENST00000479051 CCDC121Q6ZUS5 278 aa17.96■□□□□ 0.47
VARS-224ENST00000479051 ASB10Q8WXI3 467 aa17.96■□□□□ 0.47
VARS-224ENST00000479051 BCL2L2Q92843 193 aaPredicted RBP17.96■□□□□ 0.47
VARS-224ENST00000479051 TMEM54Q969K7 222 aa17.96■□□□□ 0.47
VARS-224ENST00000479051 FUZQ9BT04 418 aa17.96■□□□□ 0.47
VARS-224ENST00000479051 LRMDAQ9H2I8 198 aa17.96■□□□□ 0.47
VARS-224ENST00000479051 REEP1Q9H902 201 aa17.96■□□□□ 0.47
VARS-224ENST00000479051 POMPQ9Y244 141 aa17.96■□□□□ 0.47
VARS-224ENST00000479051 ABCA4P78363 2273 aa17.95■□□□□ 0.46
VARS-224ENST00000479051 A0A1W2PR80 420 aa17.95■□□□□ 0.46
VARS-224ENST00000479051 UNC119BA6NIH7 251 aa17.95■□□□□ 0.46
VARS-224ENST00000479051 IGHMP01871 453 aa17.95■□□□□ 0.46
VARS-224ENST00000479051 PGA4P0DJD7 388 aa17.95■□□□□ 0.46
VARS-224ENST00000479051 PGA3P0DJD8 388 aa17.95■□□□□ 0.46
VARS-224ENST00000479051 ACADSP16219 412 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms