RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 DUS3LQ96G46 650 aaKnown RBP12.8□□□□□ -0.36
USP11-207ENST00000478596 SLC19A3Q9BZV2 496 aa12.8□□□□□ -0.36
USP11-207ENST00000478596 NDEL1Q9GZM8 345 aa12.8□□□□□ -0.36
USP11-207ENST00000478596 MAN2C1Q9NTJ4 1040 aa12.8□□□□□ -0.36
USP11-207ENST00000478596 MCTS1Q9ULC4 181 aaKnown RBP12.8□□□□□ -0.36
USP11-207ENST00000478596 HDGFL3Q9Y3E1 203 aa12.8□□□□□ -0.36
USP11-207ENST00000478596 MAGED1Q9Y5V3 778 aaPredicted RBP12.8□□□□□ -0.36
USP11-207ENST00000478596 CXCL13O43927 109 aa12.79□□□□□ -0.36
USP11-207ENST00000478596 CH25HO95992 272 aa12.79□□□□□ -0.36
USP11-207ENST00000478596 IGHV4-31P0DP07 118 aa12.79□□□□□ -0.36
USP11-207ENST00000478596 ZNF708P17019 499 aa12.79□□□□□ -0.36
USP11-207ENST00000478596 CLK1P49759 484 aaKnown RBP12.79□□□□□ -0.36
USP11-207ENST00000478596 CLDN15P56746 228 aa12.79□□□□□ -0.36
USP11-207ENST00000478596 DSCR9P59020 149 aa12.79□□□□□ -0.36
USP11-207ENST00000478596 GK3PQ14409 553 aa12.79□□□□□ -0.36
USP11-207ENST00000478596 TAF11Q15544 211 aa12.79□□□□□ -0.36
USP11-207ENST00000478596 FAM69AQ5T7M9 428 aa12.79□□□□□ -0.36
USP11-207ENST00000478596 IL17RELQ6ZVW7 336 aa12.79□□□□□ -0.36
USP11-207ENST00000478596 MBOAT2Q6ZWT7 520 aa12.79□□□□□ -0.36
USP11-207ENST00000478596 NANOGNBQ7Z5D8 188 aa12.79□□□□□ -0.36
USP11-207ENST00000478596 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.79□□□□□ -0.36
USP11-207ENST00000478596 OR10G2Q8NGC3 310 aa12.79□□□□□ -0.36
USP11-207ENST00000478596 OR10D3Q8NH80 312 aa12.79□□□□□ -0.36
USP11-207ENST00000478596 SLC7A13Q8TCU3 470 aa12.79□□□□□ -0.36
USP11-207ENST00000478596 SMAP2Q8WU79 429 aaPredicted RBP12.79□□□□□ -0.36
USP11-207ENST00000478596 FBXW5Q969U6 566 aa12.79□□□□□ -0.36
USP11-207ENST00000478596 KTI12Q96EK9 354 aaPredicted RBP12.79□□□□□ -0.36
USP11-207ENST00000478596 FAM46AQ96IP4 442 aaKnown RBP12.79□□□□□ -0.36
USP11-207ENST00000478596 DHRS1Q96LJ7 313 aa12.79□□□□□ -0.36
USP11-207ENST00000478596 PKP2Q99959 881 aa12.79□□□□□ -0.36
USP11-207ENST00000478596 PRSS27Q9BQR3 290 aa12.79□□□□□ -0.36
USP11-207ENST00000478596 ZNF556Q9HAH1 456 aa12.79□□□□□ -0.36
USP11-207ENST00000478596 VNN3Q9NY84 501 aa12.79□□□□□ -0.36
USP11-207ENST00000478596 PDP1Q9P0J1 537 aaPredicted RBP12.79□□□□□ -0.36
USP11-207ENST00000478596 GDF2Q9UK05 429 aaPredicted RBP12.79□□□□□ -0.36
USP11-207ENST00000478596 DYSFO75923 2080 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 IGKV1D-42A0A075B6H8 117 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 A0A087WUU8 490 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 A0A0J9YW62 118 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 SH3PXD2BA1X283 911 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 H0YC42 278 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 H3BNX3 289 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 OR2T1O43869 369 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 OR6A2O95222 327 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 LYPD3O95274 346 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 HNF1AP20823 631 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 COMPP49747 757 aaPredicted RBP12.78□□□□□ -0.36
USP11-207ENST00000478596 DIO1P49895 249 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 TPD52P55327 224 aaPredicted RBP12.78□□□□□ -0.36
USP11-207ENST00000478596 CLDN18P56856 261 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 CARD18P57730 90 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 SLC35A1P78382 337 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 BCL2A1Q16548 175 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 TBPL2Q6SJ96 375 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 GGNQ86UU5 652 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 ZDHHC13Q8IUH4 622 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 PQLC1Q8N2U9 271 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 LINC00471Q8N535 108 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 ATG16L2Q8NAA4 619 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 AQP11Q8NBQ7 271 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 OR9Q2Q8NGE9 314 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 GIPC3Q8TF64 312 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 CPNE4Q96A23 557 aaPredicted RBP12.78□□□□□ -0.36
USP11-207ENST00000478596 BPIFA2Q96DR5 249 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 CENPNQ96H22 339 aaPredicted RBP12.78□□□□□ -0.36
USP11-207ENST00000478596 C1orf159Q96HA4 380 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 ZNF845Q96IR2 970 aaPredicted RBP12.78□□□□□ -0.36
USP11-207ENST00000478596 ARL5BQ96KC2 179 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 NAA11Q9BSU3 229 aaPredicted RBP12.78□□□□□ -0.36
USP11-207ENST00000478596 POTEKPQ9BYX7 375 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 NANSQ9NR45 359 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 PAQR5Q9NXK6 330 aaPredicted RBP12.78□□□□□ -0.36
USP11-207ENST00000478596 KCNS2Q9ULS6 477 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 TRRAPQ9Y4A5 3859 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 FREM1Q5H8C1 2179 aa12.78□□□□□ -0.36
USP11-207ENST00000478596 MED12LQ86YW9 2145 aa12.77□□□□□ -0.36
USP11-207ENST00000478596 EFCAB9A8MZ26 197 aa12.77□□□□□ -0.37
USP11-207ENST00000478596 EFNA2O43921 213 aa12.77□□□□□ -0.37
USP11-207ENST00000478596 SSX4O60224 188 aa12.77□□□□□ -0.37
USP11-207ENST00000478596 OR7A10O76100 309 aa12.77□□□□□ -0.37
USP11-207ENST00000478596 PMS2P2O95744 297 aa12.77□□□□□ -0.37
USP11-207ENST00000478596 PLGP00747 810 aaPredicted RBP12.77□□□□□ -0.37
USP11-207ENST00000478596 MT-ATP6P00846 226 aa12.77□□□□□ -0.37
USP11-207ENST00000478596 FCGR2AP12318 317 aa12.77□□□□□ -0.37
USP11-207ENST00000478596 ENPP1P22413 925 aa12.77□□□□□ -0.37
USP11-207ENST00000478596 DEFA6Q01524 100 aa12.77□□□□□ -0.37
USP11-207ENST00000478596 MFSD13AQ14CX5 517 aa12.77□□□□□ -0.37
USP11-207ENST00000478596 SEC23BQ15437 767 aa12.77□□□□□ -0.37
USP11-207ENST00000478596 IQCCQ4KMZ1 466 aa12.77□□□□□ -0.37
USP11-207ENST00000478596 PRR31Q5SQ13 230 aa12.77□□□□□ -0.37
USP11-207ENST00000478596 OTUD3Q5T2D3 398 aaPredicted RBP12.77□□□□□ -0.37
USP11-207ENST00000478596 RNF113BQ8IZP6 322 aaKnown RBP12.77□□□□□ -0.37
USP11-207ENST00000478596 SVOPLQ8N434 492 aa12.77□□□□□ -0.37
USP11-207ENST00000478596 ZNF610Q8N9Z0 462 aa12.77□□□□□ -0.37
USP11-207ENST00000478596 OR5K1Q8NHB7 308 aa12.77□□□□□ -0.37
USP11-207ENST00000478596 OSTF1Q92882 214 aa12.77□□□□□ -0.37
USP11-207ENST00000478596 TAAR8Q969N4 342 aa12.77□□□□□ -0.37
USP11-207ENST00000478596 GRIP2Q9C0E4 1043 aa12.77□□□□□ -0.37
USP11-207ENST00000478596 DCLRE1BQ9H816 532 aa12.77□□□□□ -0.37
USP11-207ENST00000478596 COQ10BQ9H8M1 238 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms