RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 MST1LQ2TV78 715 aa20.37■□□□□ 0.85
C9orf3-215ENST00000478473 POU5F2Q8N7G0 328 aa20.37■□□□□ 0.85
C9orf3-215ENST00000478473 TMEM54Q969K7 222 aa20.37■□□□□ 0.85
C9orf3-215ENST00000478473 B3GAT2Q9NPZ5 323 aa20.37■□□□□ 0.85
C9orf3-215ENST00000478473 RIMS3Q9UJD0 308 aa20.37■□□□□ 0.85
C9orf3-215ENST00000478473 HTR3EA5X5Y0 456 aa20.36■□□□□ 0.85
C9orf3-215ENST00000478473 ZNF503-AS2A6NEH8 195 aa20.36■□□□□ 0.85
C9orf3-215ENST00000478473 ZNF726A6NNF4 738 aa20.36■□□□□ 0.85
C9orf3-215ENST00000478473 M0R3G1 203 aa20.36■□□□□ 0.85
C9orf3-215ENST00000478473 IFNGR1P15260 489 aa20.36■□□□□ 0.85
C9orf3-215ENST00000478473 TNFRSF1BP20333 461 aa20.36■□□□□ 0.85
C9orf3-215ENST00000478473 TREML1Q86YW5 311 aa20.36■□□□□ 0.85
C9orf3-215ENST00000478473 NKAIN4Q8IVV8 208 aa20.36■□□□□ 0.85
C9orf3-215ENST00000478473 LRRC17Q8N6Y2 441 aa20.36■□□□□ 0.85
C9orf3-215ENST00000478473 NUP37Q8NFH4 326 aa20.36■□□□□ 0.85
C9orf3-215ENST00000478473 IL17RDQ8NFM7 739 aa20.36■□□□□ 0.85
C9orf3-215ENST00000478473 HS6ST2Q96MM7 605 aa20.36■□□□□ 0.85
C9orf3-215ENST00000478473 MYLK2Q9H1R3 596 aa20.36■□□□□ 0.85
C9orf3-215ENST00000478473 OR6A2O95222 327 aa20.35■□□□□ 0.85
C9orf3-215ENST00000478473 BMP4P12644 408 aa20.35■□□□□ 0.85
C9orf3-215ENST00000478473 CHRNB3Q05901 458 aa20.35■□□□□ 0.85
C9orf3-215ENST00000478473 PIN1Q13526 163 aaPredicted RBP20.35■□□□□ 0.85
C9orf3-215ENST00000478473 SLC35D2Q76EJ3 337 aa20.35■□□□□ 0.85
C9orf3-215ENST00000478473 OR10H5Q8NGA6 315 aa20.35■□□□□ 0.85
C9orf3-215ENST00000478473 OR4F15Q8NGB8 312 aa20.35■□□□□ 0.85
C9orf3-215ENST00000478473 SLC25A44Q96H78 314 aaPredicted RBP20.35■□□□□ 0.85
C9orf3-215ENST00000478473 ZNF75AQ96N20 296 aa20.35■□□□□ 0.85
C9orf3-215ENST00000478473 SEPHS2Q99611 448 aa20.35■□□□□ 0.85
C9orf3-215ENST00000478473 REG4Q9BYZ8 158 aa20.35■□□□□ 0.85
C9orf3-215ENST00000478473 DENND2DQ9H6A0 471 aaPredicted RBP20.35■□□□□ 0.85
C9orf3-215ENST00000478473 EFCAB1Q9HAE3 211 aa20.35■□□□□ 0.85
C9orf3-215ENST00000478473 CA10Q9NS85 328 aa20.35■□□□□ 0.85
C9orf3-215ENST00000478473 HIVEP2P31629 2446 aa20.35■□□□□ 0.85
C9orf3-215ENST00000478473 ARFGEF3Q5TH69 2177 aa20.34■□□□□ 0.85
C9orf3-215ENST00000478473 SMAD7O15105 426 aaKnown RBP20.34■□□□□ 0.85
C9orf3-215ENST00000478473 OR1E2P47887 323 aa20.34■□□□□ 0.85
C9orf3-215ENST00000478473 UGT2B15P54855 530 aa20.34■□□□□ 0.85
C9orf3-215ENST00000478473 DSCR9P59020 149 aa20.34■□□□□ 0.85
C9orf3-215ENST00000478473 TAS2R41P59536 307 aa20.34■□□□□ 0.85
C9orf3-215ENST00000478473 TUBA1BP68363 451 aa20.34■□□□□ 0.85
C9orf3-215ENST00000478473 TUBA4AP68366 448 aa20.34■□□□□ 0.85
C9orf3-215ENST00000478473 KRTAP1-1Q07627 177 aa20.34■□□□□ 0.85
C9orf3-215ENST00000478473 CAMK2DQ13557 499 aa20.34■□□□□ 0.85
C9orf3-215ENST00000478473 EFNB3Q15768 340 aa20.34■□□□□ 0.85
C9orf3-215ENST00000478473 TUBA1AQ71U36 451 aa20.34■□□□□ 0.85
C9orf3-215ENST00000478473 TMEM239Q8WW34 195 aa20.34■□□□□ 0.85
C9orf3-215ENST00000478473 ULBP2Q9BZM5 246 aa20.34■□□□□ 0.85
C9orf3-215ENST00000478473 ZNF442Q9H7R0 627 aa20.34■□□□□ 0.85
C9orf3-215ENST00000478473 A4GNTQ9UNA3 340 aa20.34■□□□□ 0.85
C9orf3-215ENST00000478473 CENPBD1B2RD01 187 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 C11orf98E9PRG8 122 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 NME4O00746 187 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 NDUFAB1O14561 156 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 HIST1H2ABP04908 130 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 CALCRP30988 508 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 CSNK1A1P48729 337 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 BIDP55957 195 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 HGFACQ04756 655 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 LIPEQ05469 1076 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 HIST3H3Q16695 136 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 LRRC23Q53EV4 343 aaPredicted RBP20.33■□□□□ 0.85
C9orf3-215ENST00000478473 CARD17Q5XLA6 110 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 DEF8Q6ZN54 512 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 HIST3H2AQ7L7L0 130 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 SPATA21Q7Z572 469 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 MYPOPQ86VE0 399 aaPredicted RBP20.33■□□□□ 0.85
C9orf3-215ENST00000478473 OR6N1Q8NGY5 312 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 TMEM255BQ8WV15 326 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 HIST1H2ACQ93077 130 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 PRRC1Q96M27 445 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 FOXB1Q99853 325 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 KCNS3Q9BQ31 491 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 SEC61A2Q9H9S3 476 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 GLTPQ9NZD2 209 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 ZNF224Q9NZL3 707 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 ABCD2Q9UBJ2 740 aa20.33■□□□□ 0.85
C9orf3-215ENST00000478473 NPIPB13A6NJU9 1138 aa20.32■□□□□ 0.84
C9orf3-215ENST00000478473 NPIPB4C9JG80 1138 aa20.32■□□□□ 0.84
C9orf3-215ENST00000478473 KPNA4O00629 521 aaPredicted RBP20.32■□□□□ 0.84
C9orf3-215ENST00000478473 RNF13O43567 381 aa20.32■□□□□ 0.84
C9orf3-215ENST00000478473 OR7A10O76100 309 aa20.32■□□□□ 0.84
C9orf3-215ENST00000478473 CELA3BP08861 270 aa20.32■□□□□ 0.84
C9orf3-215ENST00000478473 PGA4P0DJD7 388 aa20.32■□□□□ 0.84
C9orf3-215ENST00000478473 PGA3P0DJD8 388 aa20.32■□□□□ 0.84
C9orf3-215ENST00000478473 FUT1P19526 365 aa20.32■□□□□ 0.84
C9orf3-215ENST00000478473 RAB35Q15286 201 aa20.32■□□□□ 0.84
C9orf3-215ENST00000478473 ADIPOQQ15848 244 aa20.32■□□□□ 0.84
C9orf3-215ENST00000478473 LRFN4Q6PJG9 635 aa20.32■□□□□ 0.84
C9orf3-215ENST00000478473 Q71RC1 249 aaPredicted RBP20.32■□□□□ 0.84
C9orf3-215ENST00000478473 PIWIL3Q7Z3Z3 882 aaKnown RBP20.32■□□□□ 0.84
C9orf3-215ENST00000478473 NANOGNBQ7Z5D8 188 aa20.32■□□□□ 0.84
C9orf3-215ENST00000478473 MDP1Q86V88 176 aa20.32■□□□□ 0.84
C9orf3-215ENST00000478473 LZICQ8WZA0 190 aa20.32■□□□□ 0.84
C9orf3-215ENST00000478473 MRPL13Q9BYD1 178 aaKnown RBP20.32■□□□□ 0.84
C9orf3-215ENST00000478473 C20orf141Q9NUB4 165 aa20.32■□□□□ 0.84
C9orf3-215ENST00000478473 POFUT2Q9Y2G5 429 aa20.32■□□□□ 0.84
C9orf3-215ENST00000478473 PMF1-BGLAPU3KQ54 211 aa20.32■□□□□ 0.84
C9orf3-215ENST00000478473 A0A096LNT2 108 aa20.31■□□□□ 0.84
C9orf3-215ENST00000478473 IGHV2OR16-5A0A0B4J2B6 119 aa20.31■□□□□ 0.84
C9orf3-215ENST00000478473 B9A039 149 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms