RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 ZNF224Q9NZL3 707 aa11.19□□□□□ -0.62
ABCF3-212ENST00000478288 USH1CQ9Y6N9 552 aa11.19□□□□□ -0.62
ABCF3-212ENST00000478288 TRBV5-3A0A0A0MS03 114 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 A0A0A6YYJ9 748 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 B4DSR2 109 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 HAX1O00165 279 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 FMO6PO60774 539 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 ENTPD5O75356 428 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 SERPINB7O75635 380 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 SEC14L2O76054 403 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 UBL3O95164 117 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 BGLAPP02818 100 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 CD79AP11912 226 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 HLA-DOBP13765 273 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 GPX2P18283 190 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 RGS8P57771 180 aaPredicted RBP11.18□□□□□ -0.62
ABCF3-212ENST00000478288 IL1RL1Q01638 556 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 TRMT5Q32P41 509 aaKnown RBP11.18□□□□□ -0.62
ABCF3-212ENST00000478288 ZNF813Q6ZN06 617 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 RANBP3LQ86VV4 465 aaPredicted RBP11.18□□□□□ -0.62
ABCF3-212ENST00000478288 MEX3DQ86XN8 651 aaKnown RBP11.18□□□□□ -0.62
ABCF3-212ENST00000478288 FUNDC1Q8IVP5 155 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 ZFAND2BQ8WV99 257 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 TLCD1Q96CP7 247 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 C7orf26Q96N11 449 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 FOXB1Q99853 325 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 ULBP2Q9BZM5 246 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 RACGAP1Q9H0H5 632 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 TCF7L2Q9NQB0 619 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 REV1Q9UBZ9 1251 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 POFUT2Q9Y2G5 429 aa11.18□□□□□ -0.62
ABCF3-212ENST00000478288 DYSFO75923 2080 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 ZNF726A6NNF4 738 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 PLPP3O14495 311 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 POLR3GO15318 223 aaPredicted RBP11.17□□□□□ -0.62
ABCF3-212ENST00000478288 TPST1O60507 370 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 RAB36O95755 333 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 B4GALT1P15291 398 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 ACHEP22303 614 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 SLC6A2P23975 617 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 SRP14P37108 136 aaKnown RBP11.17□□□□□ -0.62
ABCF3-212ENST00000478288 MAGOHP61326 146 aaKnown RBP11.17□□□□□ -0.62
ABCF3-212ENST00000478288 SCGB2A2Q13296 93 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 PMS2P3Q13401 168 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 SCARB2Q14108 478 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 OR1Q1Q15612 314 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 TRIP10Q15642 601 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 MSMPQ1L6U9 139 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 MMEL1Q495T6 779 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 GLIPR1L2Q4G1C9 344 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 ELFN2Q5R3F8 820 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 CARD17Q5XLA6 110 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 ZNF613Q6PF04 617 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 PIWIL3Q7Z3Z3 882 aaKnown RBP11.17□□□□□ -0.62
ABCF3-212ENST00000478288 C10orf111Q8N326 155 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 HIPK4Q8NE63 616 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 SPDL1Q96EA4 605 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 MS4A3Q96HJ5 214 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 MOGAT1Q96PD6 335 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 EMC6Q9BV81 110 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 TPK1Q9H3S4 243 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 ZNF385DQ9H6B1 395 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 SLC52A3Q9NQ40 469 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 MED29Q9NX70 200 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 VAPAQ9P0L0 249 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 SLC7A8Q9UHI5 535 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 SLC13A4Q9UKG4 626 aa11.17□□□□□ -0.62
ABCF3-212ENST00000478288 SH3PXD2BA1X283 911 aa11.16□□□□□ -0.62
ABCF3-212ENST00000478288 TPST2O60704 377 aa11.16□□□□□ -0.62
ABCF3-212ENST00000478288 TFP02787 698 aa11.16□□□□□ -0.62
ABCF3-212ENST00000478288 LSP1P33241 339 aa11.16□□□□□ -0.62
ABCF3-212ENST00000478288 GIPRP48546 466 aa11.16□□□□□ -0.62
ABCF3-212ENST00000478288 PTDSS1P48651 473 aaKnown RBP11.16□□□□□ -0.62
ABCF3-212ENST00000478288 CSNK1A1P48729 337 aa11.16□□□□□ -0.62
ABCF3-212ENST00000478288 TMEM33P57088 247 aa11.16□□□□□ -0.62
ABCF3-212ENST00000478288 PCBP3P57721 371 aaKnown RBP11.16□□□□□ -0.62
ABCF3-212ENST00000478288 RAB1AP62820 205 aa11.16□□□□□ -0.62
ABCF3-212ENST00000478288 SRSF2Q01130 221 aaKnown RBP11.16□□□□□ -0.62
ABCF3-212ENST00000478288 GALK2Q01415 458 aa11.16□□□□□ -0.62
ABCF3-212ENST00000478288 NRN1LQ496H8 165 aa11.16□□□□□ -0.62
ABCF3-212ENST00000478288 LINC00114Q6XXX2 140 aa11.16□□□□□ -0.62
ABCF3-212ENST00000478288 DPPA2Q7Z7J5 298 aa11.16□□□□□ -0.62
ABCF3-212ENST00000478288 GLCCI1Q86VQ1 547 aa11.16□□□□□ -0.62
ABCF3-212ENST00000478288 ARMC8Q8IUR7 673 aa11.16□□□□□ -0.62
ABCF3-212ENST00000478288 OR6N1Q8NGY5 312 aa11.16□□□□□ -0.62
ABCF3-212ENST00000478288 OR5J2Q8NH18 312 aa11.16□□□□□ -0.62
ABCF3-212ENST00000478288 OR6X1Q8NH79 312 aa11.16□□□□□ -0.62
ABCF3-212ENST00000478288 RDH5Q92781 318 aa11.16□□□□□ -0.62
ABCF3-212ENST00000478288 TXNDC15Q96J42 360 aa11.16□□□□□ -0.62
ABCF3-212ENST00000478288 CCDC28BQ9BUN5 200 aa11.16□□□□□ -0.62
ABCF3-212ENST00000478288 CCDC167Q9P0B6 97 aa11.16□□□□□ -0.62
ABCF3-212ENST00000478288 SLAMF8Q9P0V8 285 aa11.16□□□□□ -0.62
ABCF3-212ENST00000478288 ZNF346Q9UL40 294 aaKnown RBP11.16□□□□□ -0.62
ABCF3-212ENST00000478288 ANGPT4Q9Y264 503 aa11.16□□□□□ -0.62
ABCF3-212ENST00000478288 EVPLLA8MZ36 301 aa11.15□□□□□ -0.62
ABCF3-212ENST00000478288 CHP2O43745 196 aa11.15□□□□□ -0.62
ABCF3-212ENST00000478288 MFN2O95140 757 aa11.15□□□□□ -0.62
ABCF3-212ENST00000478288 SERPINA5P05154 406 aa11.15□□□□□ -0.62
ABCF3-212ENST00000478288 SAGP10523 405 aaPredicted RBP11.15□□□□□ -0.62
ABCF3-212ENST00000478288 CBLP22681 906 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms