RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 KIF17Q9P2E2 1029 aa17.64■□□□□ 0.41
ACTB-210ENST00000477812 NKX1-2Q9UD57 310 aaPredicted RBP17.64■□□□□ 0.41
ACTB-210ENST00000477812 PROCRQ9UNN8 238 aa17.64■□□□□ 0.41
ACTB-210ENST00000477812 RRP15Q9Y3B9 282 aaKnown RBP17.64■□□□□ 0.41
ACTB-210ENST00000477812 SLC35F4A4IF30 521 aa17.63■□□□□ 0.41
ACTB-210ENST00000477812 A8MXE2 369 aa17.63■□□□□ 0.41
ACTB-210ENST00000477812 H0YHG0 523 aa17.63■□□□□ 0.41
ACTB-210ENST00000477812 BHLHE40O14503 412 aa17.63■□□□□ 0.41
ACTB-210ENST00000477812 EI24O14681 340 aa17.63■□□□□ 0.41
ACTB-210ENST00000477812 BCL10O95999 233 aa17.63■□□□□ 0.41
ACTB-210ENST00000477812 OSMP13725 252 aa17.63■□□□□ 0.41
ACTB-210ENST00000477812 SLC6A6P31641 620 aa17.63■□□□□ 0.41
ACTB-210ENST00000477812 RPL4P36578 427 aaKnown RBP17.63■□□□□ 0.41
ACTB-210ENST00000477812 BIDP55957 195 aa17.63■□□□□ 0.41
ACTB-210ENST00000477812 RPL27P61353 136 aaKnown RBP17.63■□□□□ 0.41
ACTB-210ENST00000477812 ERVK-25P63136 954 aa17.63■□□□□ 0.41
ACTB-210ENST00000477812 LGALS3BPQ08380 585 aa17.63■□□□□ 0.41
ACTB-210ENST00000477812 TAF11Q15544 211 aa17.63■□□□□ 0.41
ACTB-210ENST00000477812 FBXL19-AS1Q494R0 122 aa17.63■□□□□ 0.41
ACTB-210ENST00000477812 SLC36A3Q495N2 470 aa17.63■□□□□ 0.41
ACTB-210ENST00000477812 TSPO2Q5TGU0 170 aa17.63■□□□□ 0.41
ACTB-210ENST00000477812 NIPAL3Q6P499 406 aa17.63■□□□□ 0.41
ACTB-210ENST00000477812 ZNF474Q6S9Z5 364 aaPredicted RBP17.63■□□□□ 0.41
ACTB-210ENST00000477812 CBR4Q8N4T8 237 aa17.63■□□□□ 0.41
ACTB-210ENST00000477812 ZNF610Q8N9Z0 462 aa17.63■□□□□ 0.41
ACTB-210ENST00000477812 ADAD1Q96M93 576 aaKnown RBP17.63■□□□□ 0.41
ACTB-210ENST00000477812 POLDIP3Q9BY77 421 aaKnown RBP17.63■□□□□ 0.41
ACTB-210ENST00000477812 MRPL13Q9BYD1 178 aaKnown RBP17.63■□□□□ 0.41
ACTB-210ENST00000477812 NDEL1Q9GZM8 345 aa17.63■□□□□ 0.41
ACTB-210ENST00000477812 ZNF556Q9HAH1 456 aa17.63■□□□□ 0.41
ACTB-210ENST00000477812 RNPEPL1Q9HAU8 725 aa17.63■□□□□ 0.41
ACTB-210ENST00000477812 MALT1Q9UDY8 824 aa17.63■□□□□ 0.41
ACTB-210ENST00000477812 PRSS50Q9UI38 385 aa17.63■□□□□ 0.41
ACTB-210ENST00000477812 FOXD3Q9UJU5 478 aaPredicted RBP17.63■□□□□ 0.41
ACTB-210ENST00000477812 POFUT2Q9Y2G5 429 aa17.63■□□□□ 0.41
ACTB-210ENST00000477812 GCN1Q92616 2671 aaKnown RBP17.63■□□□□ 0.41
ACTB-210ENST00000477812 CACNA1CQ13936 2221 aa17.62■□□□□ 0.41
ACTB-210ENST00000477812 EEF1E1-BLOC1S5C9J1V9 151 aa17.62■□□□□ 0.41
ACTB-210ENST00000477812 SOCS2O14508 198 aa17.62■□□□□ 0.41
ACTB-210ENST00000477812 CASQ2O14958 399 aaPredicted RBP17.62■□□□□ 0.41
ACTB-210ENST00000477812 ARPC3O15145 178 aa17.62■□□□□ 0.41
ACTB-210ENST00000477812 EEF1E1O43324 174 aaKnown RBP17.62■□□□□ 0.41
ACTB-210ENST00000477812 AKAP8O43823 692 aaKnown RBP17.62■□□□□ 0.41
ACTB-210ENST00000477812 MITFO75030 526 aaPredicted RBP17.62■□□□□ 0.41
ACTB-210ENST00000477812 SMNDC1O75940 238 aaKnown RBP eCLIP17.62■□□□□ 0.413e-14■■■■□ 20.3
ACTB-210ENST00000477812 CNOT4O95628 575 aaKnown RBP17.62■□□□□ 0.41
ACTB-210ENST00000477812 PPP1R3DO95685 299 aa17.62■□□□□ 0.41
ACTB-210ENST00000477812 TXNDC12O95881 172 aa17.62■□□□□ 0.41
ACTB-210ENST00000477812 PGA4P0DJD7 388 aa17.62■□□□□ 0.41
ACTB-210ENST00000477812 PGA3P0DJD8 388 aa17.62■□□□□ 0.41
ACTB-210ENST00000477812 TFF3Q07654 80 aa17.62■□□□□ 0.41
ACTB-210ENST00000477812 TOP3AQ13472 1001 aaPredicted RBP17.62■□□□□ 0.41
ACTB-210ENST00000477812 RIPK1Q13546 671 aa17.62■□□□□ 0.41
ACTB-210ENST00000477812 DAG1Q14118 895 aa17.62■□□□□ 0.41
ACTB-210ENST00000477812 GABRG1Q8N1C3 465 aa17.62■□□□□ 0.41
ACTB-210ENST00000477812 OR4Q3Q8NH05 313 aa17.62■□□□□ 0.41
ACTB-210ENST00000477812 CA5BP1Q8WTZ4 195 aa17.62■□□□□ 0.41
ACTB-210ENST00000477812 NMD3Q96D46 503 aaKnown RBP17.62■□□□□ 0.41
ACTB-210ENST00000477812 SLC25A44Q96H78 314 aaPredicted RBP17.62■□□□□ 0.41
ACTB-210ENST00000477812 Q96M85 177 aa17.62■□□□□ 0.41
ACTB-210ENST00000477812 SLC29A1Q99808 456 aa17.62■□□□□ 0.41
ACTB-210ENST00000477812 RBM4BQ9BQ04 359 aaKnown RBP17.62■□□□□ 0.41
ACTB-210ENST00000477812 C9orf16Q9BUW7 83 aa17.62■□□□□ 0.41
ACTB-210ENST00000477812 RBM4Q9BWF3 364 aaKnown RBP17.62■□□□□ 0.41
ACTB-210ENST00000477812 LINC00470Q9BZP3 86 aa17.62■□□□□ 0.41
ACTB-210ENST00000477812 SLCO5A1Q9H2Y9 848 aa17.62■□□□□ 0.41
ACTB-210ENST00000477812 SLC7A10Q9NS82 523 aa17.62■□□□□ 0.41
ACTB-210ENST00000477812 ZNF346Q9UL40 294 aaKnown RBP17.62■□□□□ 0.41
ACTB-210ENST00000477812 FAM90A27PA6NNH2 459 aa17.61■□□□□ 0.41
ACTB-210ENST00000477812 IGHV3-9P01782 118 aa17.61■□□□□ 0.41
ACTB-210ENST00000477812 IGFBP5P24593 272 aa17.61■□□□□ 0.41
ACTB-210ENST00000477812 SDHAP31040 664 aa17.61■□□□□ 0.41
ACTB-210ENST00000477812 HIST3H3Q16695 136 aa17.61■□□□□ 0.41
ACTB-210ENST00000477812 MESTQ5EB52 335 aa17.61■□□□□ 0.41
ACTB-210ENST00000477812 CLEC12AQ5QGZ9 265 aa17.61■□□□□ 0.41
ACTB-210ENST00000477812 PHYHD1Q5SRE7 291 aa17.61■□□□□ 0.41
ACTB-210ENST00000477812 FAM205BPQ63HN1 556 aa17.61■□□□□ 0.41
ACTB-210ENST00000477812 GPR139Q6DWJ6 353 aa17.61■□□□□ 0.41
ACTB-210ENST00000477812 LINGO2Q7L985 606 aa17.61■□□□□ 0.41
ACTB-210ENST00000477812 C20orf196Q8IYI0 205 aa17.61■□□□□ 0.41
ACTB-210ENST00000477812 ZNF100Q8IYN0 542 aa17.61■□□□□ 0.41
ACTB-210ENST00000477812 ARIH2OSQ8N7S6 290 aa17.61■□□□□ 0.41
ACTB-210ENST00000477812 SSC4DQ8WTU2 575 aa17.61■□□□□ 0.41
ACTB-210ENST00000477812 HDAC2Q92769 488 aaKnown RBP17.61■□□□□ 0.41
ACTB-210ENST00000477812 LRR1Q96L50 414 aa17.61■□□□□ 0.41
ACTB-210ENST00000477812 TSSK6Q9BXA6 273 aa17.61■□□□□ 0.41
ACTB-210ENST00000477812 KRT84Q9NSB2 600 aa17.61■□□□□ 0.41
ACTB-210ENST00000477812 TBC1D23Q9NUY8 699 aa17.61■□□□□ 0.41
ACTB-210ENST00000477812 IER3IP1Q9Y5U9 82 aa17.61■□□□□ 0.41
ACTB-210ENST00000477812 ADGRG4Q8IZF6 3080 aa17.61■□□□□ 0.41
ACTB-210ENST00000477812 TEX13CA0A0J9YWL9 993 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 NKX2-6A6NCS4 301 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 OR6C65A6NJZ3 312 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 CENPBD1B2RD01 187 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 SLC43A1O75387 559 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 UPK3AO75631 287 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 TRMUO75648 421 aaKnown RBP17.6■□□□□ 0.41
ACTB-210ENST00000477812 CLDN14O95500 239 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 ACADSP16219 412 aa17.6■□□□□ 0.41
ACTB-210ENST00000477812 COX5AP20674 150 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms