RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 SPATA21Q7Z572 469 aa18.93■□□□□ 0.62
COL9A3-211ENST00000477612 HS6ST2Q96MM7 605 aa18.93■□□□□ 0.62
COL9A3-211ENST00000477612 ELAC2Q9BQ52 826 aaKnown RBP18.93■□□□□ 0.62
COL9A3-211ENST00000477612 B3GAT2Q9NPZ5 323 aa18.93■□□□□ 0.62
COL9A3-211ENST00000477612 GDF2Q9UK05 429 aaPredicted RBP18.93■□□□□ 0.62
COL9A3-211ENST00000477612 C11orf98E9PRG8 122 aa18.92■□□□□ 0.62
COL9A3-211ENST00000477612 NME4O00746 187 aa18.92■□□□□ 0.62
COL9A3-211ENST00000477612 LY6G6DO95868 133 aa18.92■□□□□ 0.62
COL9A3-211ENST00000477612 CRYAAP02489 173 aa18.92■□□□□ 0.62
COL9A3-211ENST00000477612 CECR9P0C854 216 aa18.92■□□□□ 0.62
COL9A3-211ENST00000477612 IFNGR1P15260 489 aa18.92■□□□□ 0.62
COL9A3-211ENST00000477612 ARR3P36575 388 aa18.92■□□□□ 0.62
COL9A3-211ENST00000477612 SEC24CP53992 1094 aa18.92■□□□□ 0.62
COL9A3-211ENST00000477612 UGT2B15P54855 530 aa18.92■□□□□ 0.62
COL9A3-211ENST00000477612 TUBA1BP68363 451 aa18.92■□□□□ 0.62
COL9A3-211ENST00000477612 TUBA4AP68366 448 aa18.92■□□□□ 0.62
COL9A3-211ENST00000477612 NAAAQ02083 359 aa18.92■□□□□ 0.62
COL9A3-211ENST00000477612 LIPEQ05469 1076 aa18.92■□□□□ 0.62
COL9A3-211ENST00000477612 KRTAP21-3Q3LHN1 58 aa18.92■□□□□ 0.62
COL9A3-211ENST00000477612 CARD17Q5XLA6 110 aa18.92■□□□□ 0.62
COL9A3-211ENST00000477612 DEF8Q6ZN54 512 aa18.92■□□□□ 0.62
COL9A3-211ENST00000477612 TUBA1AQ71U36 451 aa18.92■□□□□ 0.62
COL9A3-211ENST00000477612 SLC35D2Q76EJ3 337 aa18.92■□□□□ 0.62
COL9A3-211ENST00000477612 TMEM54Q969K7 222 aa18.92■□□□□ 0.62
COL9A3-211ENST00000477612 POM121Q96HA1 1249 aa18.92■□□□□ 0.62
COL9A3-211ENST00000477612 CACNG6Q9BXT2 260 aa18.92■□□□□ 0.62
COL9A3-211ENST00000477612 B3GNT2Q9NY97 397 aa18.92■□□□□ 0.62
COL9A3-211ENST00000477612 A4GNTQ9UNA3 340 aa18.92■□□□□ 0.62
COL9A3-211ENST00000477612 YLPM1P49750 1951 aaKnown RBP18.92■□□□□ 0.62
COL9A3-211ENST00000477612 CHD3Q12873 2000 aaKnown RBP18.91■□□□□ 0.62
COL9A3-211ENST00000477612 ZNF503-AS2A6NEH8 195 aa18.91■□□□□ 0.62
COL9A3-211ENST00000477612 H7C417 338 aa18.91■□□□□ 0.62
COL9A3-211ENST00000477612 KPNA4O00629 521 aaPredicted RBP18.91■□□□□ 0.62
COL9A3-211ENST00000477612 NDUFAB1O14561 156 aa18.91■□□□□ 0.62
COL9A3-211ENST00000477612 SHOX2O60902 331 aaPredicted RBP18.91■□□□□ 0.62
COL9A3-211ENST00000477612 HIST1H2ABP04908 130 aa18.91■□□□□ 0.62
COL9A3-211ENST00000477612 ACVR1BP36896 505 aa18.91■□□□□ 0.62
COL9A3-211ENST00000477612 BIDP55957 195 aa18.91■□□□□ 0.62
COL9A3-211ENST00000477612 SWI5Q1ZZU3 235 aa18.91■□□□□ 0.62
COL9A3-211ENST00000477612 HIST3H2AQ7L7L0 130 aa18.91■□□□□ 0.62
COL9A3-211ENST00000477612 OR6N1Q8NGY5 312 aa18.91■□□□□ 0.62
COL9A3-211ENST00000477612 TMEM255BQ8WV15 326 aa18.91■□□□□ 0.62
COL9A3-211ENST00000477612 TMEM239Q8WW34 195 aa18.91■□□□□ 0.62
COL9A3-211ENST00000477612 LZICQ8WZA0 190 aa18.91■□□□□ 0.62
COL9A3-211ENST00000477612 HIST1H2ACQ93077 130 aa18.91■□□□□ 0.62
COL9A3-211ENST00000477612 GMPR2Q9P2T1 348 aaKnown RBP18.91■□□□□ 0.62
COL9A3-211ENST00000477612 CSPG4Q6UVK1 2322 aa18.9■□□□□ 0.62
COL9A3-211ENST00000477612 HTR3EA5X5Y0 456 aa18.9■□□□□ 0.62
COL9A3-211ENST00000477612 RNF13O43567 381 aa18.9■□□□□ 0.62
COL9A3-211ENST00000477612 SNX3O60493 162 aa18.9■□□□□ 0.62
COL9A3-211ENST00000477612 FUT1P19526 365 aa18.9■□□□□ 0.62
COL9A3-211ENST00000477612 PRDX6P30041 224 aa18.9■□□□□ 0.62
COL9A3-211ENST00000477612 SLC7A2P52569 658 aa18.9■□□□□ 0.62
COL9A3-211ENST00000477612 ST3GAL3Q11203 375 aa18.9■□□□□ 0.62
COL9A3-211ENST00000477612 MST1LQ2TV78 715 aa18.9■□□□□ 0.62
COL9A3-211ENST00000477612 CBLL1Q75N03 491 aa18.9■□□□□ 0.62
COL9A3-211ENST00000477612 IL17RDQ8NFM7 739 aa18.9■□□□□ 0.62
COL9A3-211ENST00000477612 OR4F15Q8NGB8 312 aa18.9■□□□□ 0.62
COL9A3-211ENST00000477612 PFN4Q8NHR9 129 aa18.9■□□□□ 0.62
COL9A3-211ENST00000477612 CMTM5Q96DZ9 223 aa18.9■□□□□ 0.62
COL9A3-211ENST00000477612 SLC25A44Q96H78 314 aaPredicted RBP18.9■□□□□ 0.62
COL9A3-211ENST00000477612 TPD52L3Q96J77 140 aa18.9■□□□□ 0.62
COL9A3-211ENST00000477612 PRRC1Q96M27 445 aa18.9■□□□□ 0.62
COL9A3-211ENST00000477612 ZNF75AQ96N20 296 aa18.9■□□□□ 0.62
COL9A3-211ENST00000477612 ULBP2Q9BZM5 246 aa18.9■□□□□ 0.62
COL9A3-211ENST00000477612 C20orf141Q9NUB4 165 aa18.9■□□□□ 0.62
COL9A3-211ENST00000477612 GLTPQ9NZD2 209 aa18.9■□□□□ 0.62
COL9A3-211ENST00000477612 ABCD2Q9UBJ2 740 aa18.9■□□□□ 0.62
COL9A3-211ENST00000477612 POFUT2Q9Y2G5 429 aa18.9■□□□□ 0.62
COL9A3-211ENST00000477612 TLN2Q9Y4G6 2542 aa18.9■□□□□ 0.62
COL9A3-211ENST00000477612 CXCR6O00574 342 aa18.89■□□□□ 0.61
COL9A3-211ENST00000477612 SMAD7O15105 426 aaKnown RBP18.89■□□□□ 0.61
COL9A3-211ENST00000477612 PDE5AO76074 875 aa18.89■□□□□ 0.61
COL9A3-211ENST00000477612 OR7A10O76100 309 aa18.89■□□□□ 0.61
COL9A3-211ENST00000477612 UMPSP11172 480 aa18.89■□□□□ 0.61
COL9A3-211ENST00000477612 CALCRP30988 508 aa18.89■□□□□ 0.61
COL9A3-211ENST00000477612 CSNK1A1P48729 337 aa18.89■□□□□ 0.61
COL9A3-211ENST00000477612 CHRNB3Q05901 458 aa18.89■□□□□ 0.61
COL9A3-211ENST00000477612 NANOGNBQ7Z5D8 188 aa18.89■□□□□ 0.61
COL9A3-211ENST00000477612 NUP37Q8NFH4 326 aa18.89■□□□□ 0.61
COL9A3-211ENST00000477612 SGTBQ96EQ0 304 aa18.89■□□□□ 0.61
COL9A3-211ENST00000477612 FOXB1Q99853 325 aa18.89■□□□□ 0.61
COL9A3-211ENST00000477612 KCNS3Q9BQ31 491 aa18.89■□□□□ 0.61
COL9A3-211ENST00000477612 DENND2DQ9H6A0 471 aaPredicted RBP18.89■□□□□ 0.61
COL9A3-211ENST00000477612 SEC61A2Q9H9S3 476 aa18.89■□□□□ 0.61
COL9A3-211ENST00000477612 MED31Q9Y3C7 131 aa18.89■□□□□ 0.61
COL9A3-211ENST00000477612 CENPBD1B2RD01 187 aa18.88■□□□□ 0.61
COL9A3-211ENST00000477612 SERPINI2O75830 405 aa18.88■□□□□ 0.61
COL9A3-211ENST00000477612 CELA3BP08861 270 aa18.88■□□□□ 0.61
COL9A3-211ENST00000477612 PGA4P0DJD7 388 aa18.88■□□□□ 0.61
COL9A3-211ENST00000477612 PGA3P0DJD8 388 aa18.88■□□□□ 0.61
COL9A3-211ENST00000477612 BMP4P12644 408 aa18.88■□□□□ 0.61
COL9A3-211ENST00000477612 DRD4P21917 467 aa18.88■□□□□ 0.61
COL9A3-211ENST00000477612 LSP1P33241 339 aa18.88■□□□□ 0.61
COL9A3-211ENST00000477612 GSK3BP49841 420 aa18.88■□□□□ 0.61
COL9A3-211ENST00000477612 RPL18Q07020 188 aaKnown RBP18.88■□□□□ 0.61
COL9A3-211ENST00000477612 HIST3H3Q16695 136 aa18.88■□□□□ 0.61
COL9A3-211ENST00000477612 ZNF813Q6ZN06 617 aa18.88■□□□□ 0.61
COL9A3-211ENST00000477612 PIWIL3Q7Z3Z3 882 aaKnown RBP18.88■□□□□ 0.61
COL9A3-211ENST00000477612 MDP1Q86V88 176 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms