RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 C1QL2Q7Z5L3 287 aa5.72□□□□□ -1.49
RTFDC1-206ENST00000477485 SNX32Q86XE0 403 aa5.72□□□□□ -1.49
RTFDC1-206ENST00000477485 CLIP4Q8N3C7 705 aa5.72□□□□□ -1.49
RTFDC1-206ENST00000477485 ANKK1Q8NFD2 765 aa5.72□□□□□ -1.49
RTFDC1-206ENST00000477485 STK35Q8TDR2 534 aa5.72□□□□□ -1.49
RTFDC1-206ENST00000477485 SLC38A4Q969I6 547 aa5.72□□□□□ -1.49
RTFDC1-206ENST00000477485 TIMD4Q96H15 378 aa5.72□□□□□ -1.49
RTFDC1-206ENST00000477485 CCDC115Q96NT0 180 aa5.72□□□□□ -1.49
RTFDC1-206ENST00000477485 GAL3ST1Q99999 423 aa5.72□□□□□ -1.49
RTFDC1-206ENST00000477485 C1QTNF5Q9BXJ0 243 aa5.72□□□□□ -1.49
RTFDC1-206ENST00000477485 ASPNQ9BXN1 380 aa5.72□□□□□ -1.49
RTFDC1-206ENST00000477485 TMPRSS13Q9BYE2 586 aa5.72□□□□□ -1.49
RTFDC1-206ENST00000477485 RNF121Q9H920 327 aa5.72□□□□□ -1.49
RTFDC1-206ENST00000477485 CDH20Q9HBT6 801 aa5.72□□□□□ -1.49
RTFDC1-206ENST00000477485 ESM1Q9NQ30 184 aa5.72□□□□□ -1.49
RTFDC1-206ENST00000477485 G6PC2Q9NQR9 355 aa5.72□□□□□ -1.49
RTFDC1-206ENST00000477485 MED29Q9NX70 200 aa5.72□□□□□ -1.49
RTFDC1-206ENST00000477485 SLC7A8Q9UHI5 535 aa5.72□□□□□ -1.49
RTFDC1-206ENST00000477485 BTNL2Q9UIR0 455 aa5.72□□□□□ -1.49
RTFDC1-206ENST00000477485 GPR160Q9UJ42 338 aa5.72□□□□□ -1.49
RTFDC1-206ENST00000477485 C5orf58C9J3I9 102 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 CLDN25C9JDP6 229 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 FTCDNL1E5RQL4 147 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 C11orf98E9PRG8 122 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 J3QLI3 93 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 TRAF3IP2O43734 574 aaPredicted RBP5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 OR2T1O43869 369 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 CLPTM1O96005 669 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 MT-ND5P03915 603 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 CCL2P13500 99 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 ZNF35P13682 527 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 HLA-DOBP13765 273 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 ZNF14P17017 642 aaPredicted RBP5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 CCNOP22674 350 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 ZFP36P26651 326 aaKnown RBP5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 SLC1A6P48664 564 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 RPL14P50914 215 aaKnown RBP5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 ARFIP2P53365 341 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 KLF3P57682 345 aaPredicted RBP5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 ABCE1P61221 599 aaKnown RBP5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 TXNL4AP83876 142 aaKnown RBP5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 TEKQ02763 1124 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 EGR4Q05215 589 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 PMS2P3Q13401 168 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 HFEQ30201 348 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 ALG10BQ5I7T1 473 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 PRR31Q5SQ13 230 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 C6orf10Q5SRN2 563 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 CEP85LQ5SZL2 805 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 FAM69AQ5T7M9 428 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 RNF220Q5VTB9 566 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 AP1ARQ63HQ0 302 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 NXNQ6DKJ4 435 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 TREML4Q6UXN2 200 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 H1FNTQ75WM6 255 aaPredicted RBP5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 TMEM123Q8N131 208 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 SIGLECL1Q8N7X8 197 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 ZDHHC22Q8N966 263 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 SLC30A7Q8NEW0 376 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 SYNPRQ8TBG9 265 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 ST7LQ8TDW4 575 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 RAB1CQ92928 201 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 TAAR8Q969N4 342 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 TMEM19Q96HH6 336 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 TEX37Q96LM6 180 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 ZIM3Q96PE6 472 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 TSPAN32Q96QS1 320 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 FOXB1Q99853 325 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 ZNF747Q9BV97 191 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 PTDSS2Q9BVG9 487 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 SPATA9Q9BWV2 254 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 RACGAP1Q9H0H5 632 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 ZNF385DQ9H6B1 395 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 UNKLQ9H9P5 680 aaKnown RBP5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 SAP30LQ9HAJ7 183 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 NTN4Q9HB63 628 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 HINT3Q9NQE9 182 aaKnown RBP5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 B3GNT2Q9NY97 397 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 B3GAT1Q9P2W7 334 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 IFT52Q9Y366 437 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 RAP2CQ9Y3L5 183 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 WIPI2Q9Y4P8 454 aa5.71□□□□□ -1.5
RTFDC1-206ENST00000477485 TRAV36DV7A0A075B6V5 113 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 A0A0G2JPF8 293 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 SLC22A23A1A5C7 686 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 DNAJC9-AS1A6NH13 148 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 C17orf100A8MU93 164 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 HNRNPCL2B2RXH8 293 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 HNRNPCL3B7ZW38 293 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 HNRNPCL1O60812 293 aaKnown RBP5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 NPIPB7O75200 414 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 RP2O75695 350 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 OR6A2O95222 327 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 HPRP00739 348 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 IGHV2-5P01817 119 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 SERPINE1P05121 402 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 HNRNPCL4P0DMR1 293 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 OR8G3PP0DMU2 310 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 HKR1P10072 659 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 ARAFP10398 606 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms