RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 OR7A10O76100 309 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 HPRP00739 348 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 IGHV3-9P01782 118 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 CD3EP07766 207 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 FUT1P19526 365 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 DAP3P51398 398 aaKnown RBP10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 PRPS1P60891 318 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 RPS4XP62701 263 aaKnown RBP10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 POU3F1Q03052 451 aaPredicted RBP10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 PRKCDQ05655 676 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 CHRNB3Q05901 458 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 CCNIQ14094 377 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 ACKR1Q16570 336 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 HMBOX1Q6NT76 420 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 KLHL24Q6TFL4 600 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 TMPRSS11FQ6ZWK6 438 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 MBOAT2Q6ZWT7 520 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 SPATA24Q86W54 205 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 WFDC8Q8IUA0 241 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 ZDHHC21Q8IVQ6 265 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 CDK20Q8IZL9 346 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 KDM8Q8N371 416 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 GPR137CQ8N3F9 429 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 ZNF611Q8N823 705 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 OR1K1Q8NGR3 316 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 FNDC8Q8TC99 324 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 TMEM255BQ8WV15 326 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 CANT1Q8WVQ1 401 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 BPIFA2Q96DR5 249 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 PLPPR2Q96GM1 343 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 SLC25A44Q96H78 314 aaPredicted RBP10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 ZC3HAV1LQ96H79 300 aaKnown RBP10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 ZNF347Q96SE7 839 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 SEPHS2Q99611 448 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 NMNAT1Q9HAN9 279 aaPredicted RBP10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 KRCC1Q9NPI7 259 aaPredicted RBP10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 CCM2LQ9NUG4 571 aaPredicted RBP10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 ARMC1Q9NVT9 282 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 NDUFAF4Q9P032 175 aa10.85□□□□□ -0.67
CLCNKA-205ENST00000477360 A0A1W2PPR1 153 aa10.84□□□□□ -0.67
CLCNKA-205ENST00000477360 SLC35F4A4IF30 521 aa10.84□□□□□ -0.67
CLCNKA-205ENST00000477360 ERICH4A6NGS2 130 aa10.84□□□□□ -0.67
CLCNKA-205ENST00000477360 ZNF99A8MXY4 864 aaPredicted RBP10.84□□□□□ -0.67
CLCNKA-205ENST00000477360 ATE1O95260 518 aa10.84□□□□□ -0.67
CLCNKA-205ENST00000477360 FABP3P05413 133 aa10.84□□□□□ -0.67
CLCNKA-205ENST00000477360 PAX1P15863 534 aa10.84□□□□□ -0.67
CLCNKA-205ENST00000477360 UGT2B15P54855 530 aa10.84□□□□□ -0.67
CLCNKA-205ENST00000477360 ROR2Q01974 943 aaKnown RBP10.84□□□□□ -0.67
CLCNKA-205ENST00000477360 KEAP1Q14145 624 aa10.84□□□□□ -0.67
CLCNKA-205ENST00000477360 GK3PQ14409 553 aa10.84□□□□□ -0.67
CLCNKA-205ENST00000477360 HIST3H3Q16695 136 aa10.84□□□□□ -0.67
CLCNKA-205ENST00000477360 FAM205BPQ63HN1 556 aa10.84□□□□□ -0.67
CLCNKA-205ENST00000477360 ZNF704Q6ZNC4 412 aaPredicted RBP10.84□□□□□ -0.67
CLCNKA-205ENST00000477360 LRRC75A-AS1Q8N1F1 130 aa10.84□□□□□ -0.67
CLCNKA-205ENST00000477360 WDR31Q8NA23 367 aa10.84□□□□□ -0.67
CLCNKA-205ENST00000477360 IGFBPL1Q8WX77 278 aa10.84□□□□□ -0.67
CLCNKA-205ENST00000477360 BCL2L2Q92843 193 aaPredicted RBP10.84□□□□□ -0.67
CLCNKA-205ENST00000477360 NDEL1Q9GZM8 345 aa10.84□□□□□ -0.67
CLCNKA-205ENST00000477360 YY1AP1Q9H869 796 aa10.84□□□□□ -0.67
CLCNKA-205ENST00000477360 SMURF2Q9HAU4 748 aa10.84□□□□□ -0.67
CLCNKA-205ENST00000477360 GPR35Q9HC97 309 aa10.84□□□□□ -0.67
CLCNKA-205ENST00000477360 CRNNQ9UBG3 495 aaPredicted RBP10.84□□□□□ -0.67
CLCNKA-205ENST00000477360 FBXL3Q9UKT7 428 aa10.84□□□□□ -0.67
CLCNKA-205ENST00000477360 HRNRQ86YZ3 2850 aaPredicted RBP10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 A0A087WUU8 490 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 A0A1W2PRG6 482 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 LRRN3E7EW58 273 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 HS3ST1O14792 307 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 RNF13O43567 381 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 AHCYL1O43865 530 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 UPK3AO75631 287 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 IGHMP01871 453 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 H1F0P07305 194 aaKnown RBP10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 CD53P19397 219 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 AHCYP23526 432 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 ZNF133P52736 654 aaPredicted RBP10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 IST1P53990 364 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 IL1RL1Q01638 556 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 RPL18Q07020 188 aaKnown RBP10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 KPNB1Q14974 876 aaKnown RBP10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 TSC22D1Q15714 1073 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 ZFP1Q6P2D0 407 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 SLC35D2Q76EJ3 337 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 RRM2BQ7LG56 351 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 DPPA2Q7Z7J5 298 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 DEPDC4Q8N2C3 294 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 LINC00471Q8N535 108 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 LRRC17Q8N6Y2 441 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 IL17RDQ8NFM7 739 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 SLC7A13Q8TCU3 470 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 TMEM54Q969K7 222 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 ZNF566Q969W8 418 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 SLCO4A1Q96BD0 722 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 HS3ST6Q96QI5 342 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 CRLF2Q9HC73 371 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 INIPQ9NRY2 104 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 C20orf141Q9NUB4 165 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 FAIMQ9NVQ4 179 aa10.83□□□□□ -0.68
CLCNKA-205ENST00000477360 AKAP6Q13023 2319 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms