RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 TLN1Q9Y490 2541 aaKnown RBP16.2■□□□□ 0.18
ATG4B-217ENST00000475693 TRAV17A0A0B4J275 112 aa16.2■□□□□ 0.18
ATG4B-217ENST00000475693 TEX13CA0A0J9YWL9 993 aa16.2■□□□□ 0.18
ATG4B-217ENST00000475693 OR2T1O43869 369 aa16.2■□□□□ 0.18
ATG4B-217ENST00000475693 ADRA2AP08913 450 aa16.2■□□□□ 0.18
ATG4B-217ENST00000475693 ENPP1P22413 925 aa16.2■□□□□ 0.18
ATG4B-217ENST00000475693 SLC6A6P31641 620 aa16.2■□□□□ 0.18
ATG4B-217ENST00000475693 RAC1P63000 192 aa16.2■□□□□ 0.18
ATG4B-217ENST00000475693 PLEKHN1Q494U1 663 aaPredicted RBP16.2■□□□□ 0.18
ATG4B-217ENST00000475693 CCDC92Q53HC0 331 aaPredicted RBP16.2■□□□□ 0.18
ATG4B-217ENST00000475693 PLBD1Q6P4A8 553 aa16.2■□□□□ 0.18
ATG4B-217ENST00000475693 TMPPEQ6ZT21 453 aa16.2■□□□□ 0.18
ATG4B-217ENST00000475693 CPOQ8IVL8 374 aa16.2■□□□□ 0.18
ATG4B-217ENST00000475693 ZNF775Q96BV0 537 aaPredicted RBP16.2■□□□□ 0.18
ATG4B-217ENST00000475693 ZNF845Q96IR2 970 aaPredicted RBP16.2■□□□□ 0.18
ATG4B-217ENST00000475693 TXNDC15Q96J42 360 aa16.2■□□□□ 0.18
ATG4B-217ENST00000475693 NMNAT3Q96T66 252 aa16.2■□□□□ 0.18
ATG4B-217ENST00000475693 TAPBPLQ9BX59 468 aa16.2■□□□□ 0.18
ATG4B-217ENST00000475693 TMEM165Q9HC07 324 aa16.2■□□□□ 0.18
ATG4B-217ENST00000475693 NRIP3Q9NQ35 241 aa16.2■□□□□ 0.18
ATG4B-217ENST00000475693 HINT3Q9NQE9 182 aaKnown RBP16.2■□□□□ 0.18
ATG4B-217ENST00000475693 ZNF346Q9UL40 294 aaKnown RBP16.2■□□□□ 0.18
ATG4B-217ENST00000475693 MT-ATP6P00846 226 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 IGF2P01344 180 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 MT-ND2P03891 347 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 HOXD11P31277 338 aaPredicted RBP16.19■□□□□ 0.18
ATG4B-217ENST00000475693 VBP1P61758 197 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 HSF1Q00613 529 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 SGCBQ16585 318 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 GPAT4Q86UL3 456 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 DEPDC4Q8N2C3 294 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 ZNF540Q8NDQ6 660 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 OR51L1Q8NGJ5 315 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 ZNRF4Q8WWF5 429 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 TSPAN32Q96QS1 320 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 ASPNQ9BXN1 380 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 RYDENQ9NUL5 291 aaKnown RBP16.19■□□□□ 0.18
ATG4B-217ENST00000475693 MED29Q9NX70 200 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 PCDHGA9Q9Y5G4 932 aaKnown RBP16.19■□□□□ 0.18
ATG4B-217ENST00000475693 MKRN2OSH3BPM6 223 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 TSPAN19P0C672 248 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 ZNF17P17021 662 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 POU3F2P20265 443 aaPredicted RBP16.19■□□□□ 0.18
ATG4B-217ENST00000475693 PSMB9P28065 219 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 GTF2E2P29084 291 aaKnown RBP16.19■□□□□ 0.18
ATG4B-217ENST00000475693 MAP2K4P45985 399 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 RUNX1T1Q06455 604 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 CRMP1Q14194 572 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 SLC10A1Q14973 349 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 ZNF181Q2M3W8 571 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 H1FNTQ75WM6 255 aaPredicted RBP16.19■□□□□ 0.18
ATG4B-217ENST00000475693 OR8J1Q8NGP2 316 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 OR9Q1Q8NGQ5 310 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 PTP4A1Q93096 173 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 TSSK2Q96PF2 358 aa16.19■□□□□ 0.18
ATG4B-217ENST00000475693 POLDIP3Q9BY77 421 aaKnown RBP16.19■□□□□ 0.18
ATG4B-217ENST00000475693 SPIN1Q9Y657 262 aaPredicted RBP16.19■□□□□ 0.18
ATG4B-217ENST00000475693 FAM171A2A8MVW0 826 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 OR6A2O95222 327 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 TGFBR2P37173 567 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 CDKN2AP42771 156 aaKnown RBP16.18■□□□□ 0.18
ATG4B-217ENST00000475693 EIF1AXP47813 144 aaKnown RBP16.18■□□□□ 0.18
ATG4B-217ENST00000475693 P2RY4P51582 365 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 PRPS1P60891 318 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 ZNF169Q14929 603 aaPredicted RBP16.18■□□□□ 0.18
ATG4B-217ENST00000475693 OTPQ5XKR4 325 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 IGFL3Q6UXB1 125 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 DPY19L2P2Q6ZN68 376 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 FAM122BQ7Z309 247 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 SLC22A16Q86VW1 577 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 TMEM163Q8TC26 289 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 MIB2Q96AX9 1013 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 KLHL15Q96M94 604 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 SLC38A2Q96QD8 506 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 EMC6Q9BV81 110 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 MRPL39Q9NYK5 338 aaKnown RBP16.18■□□□□ 0.18
ATG4B-217ENST00000475693 ACACBO00763 2458 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 CXCL13O43927 109 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 FAM20BO75063 409 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 UPK1BO75841 260 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 NCS1P62166 190 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 SHFQ7M4L6 423 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 FAM98AQ8NCA5 519 aaKnown RBP16.18■□□□□ 0.18
ATG4B-217ENST00000475693 LSM14AQ8ND56 463 aaKnown RBP16.18■□□□□ 0.18
ATG4B-217ENST00000475693 SMAP2Q8WU79 429 aaPredicted RBP16.18■□□□□ 0.18
ATG4B-217ENST00000475693 SLC25A43Q8WUT9 341 aaPredicted RBP16.18■□□□□ 0.18
ATG4B-217ENST00000475693 ROBO4Q8WZ75 1007 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 ZHX1-C8orf76Q96EF9 292 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 ZNF582Q96NG8 517 aaPredicted RBP16.18■□□□□ 0.18
ATG4B-217ENST00000475693 LDAHQ9H6V9 325 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 CHST11Q9NPF2 352 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 PLCXD1Q9NUJ7 323 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 B3GAT1Q9P2W7 334 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 SPRR3Q9UBC9 169 aa16.18■□□□□ 0.18
ATG4B-217ENST00000475693 A0A087WV48 116 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 TFECO14948 347 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-217ENST00000475693 CD14P08571 375 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 ZNF24P17028 368 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 LHX2P50458 406 aa16.17■□□□□ 0.18
ATG4B-217ENST00000475693 SNRPGP62308 76 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms