RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 CORINQ9Y5Q5 1042 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 TRAV36DV7A0A075B6V5 113 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 A0A0G2JPF8 293 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 ZNF726A6NNF4 738 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 C17orf100A8MU93 164 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 HNRNPCL2B2RXH8 293 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 HNRNPCL3B7ZW38 293 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 CLDN25C9JDP6 229 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 RFXANKO14593 260 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 HNRNPCL1O60812 293 aaKnown RBP10.77□□□□□ -0.69
SKA3-206ENST00000475251 PRSS23O95084 383 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 BCHEP06276 602 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 HNRNPCL4P0DMR1 293 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 B4GALT1P15291 398 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 GRPRP30550 384 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 CRATP43155 626 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 GIPRP48546 466 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 RPL14P50914 215 aaKnown RBP10.77□□□□□ -0.69
SKA3-206ENST00000475251 KLF3P57682 345 aaPredicted RBP10.77□□□□□ -0.69
SKA3-206ENST00000475251 DSTNP60981 165 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 DEFA6Q01524 100 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 MVKQ03426 396 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 MOGQ16653 247 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 CARD17Q5XLA6 110 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 OGFOD2Q6N063 350 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 TREML4Q6UXN2 200 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 RETREG3Q86VR2 466 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 LRP11Q86VZ4 500 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 CLIP4Q8N3C7 705 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 OR6N1Q8NGY5 312 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 ZNF75AQ96N20 296 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 FOXB1Q99853 325 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 ULBP2Q9BZM5 246 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 HINT3Q9NQE9 182 aaKnown RBP10.77□□□□□ -0.69
SKA3-206ENST00000475251 NKIRAS2Q9NYR9 191 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 TAAR3PQ9P1P4 343 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 MYEF2Q9P2K5 600 aaKnown RBP10.77□□□□□ -0.69
SKA3-206ENST00000475251 SEC14L4Q9UDX3 406 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 FZR1Q9UM11 496 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 RAP2CQ9Y3L5 183 aa10.77□□□□□ -0.69
SKA3-206ENST00000475251 A0A0G2JK05 382 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 CDC14BO60729 498 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 C1QCP02747 245 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 SERPINE1P05121 402 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 SERPINA5P05154 406 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 ADRA2CP18825 462 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 CDKN2CP42773 168 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 CRYBB2P43320 205 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 MAGEB1P43366 347 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 ABCE1P61221 599 aaKnown RBP10.76□□□□□ -0.69
SKA3-206ENST00000475251 CCL8P80075 99 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 IFFO1Q0D2I5 559 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 ZP4Q12836 540 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 MAPK11Q15759 364 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 HFEQ30201 348 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 FAM209AQ5JX71 171 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 PHYHD1Q5SRE7 291 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 AVPI1Q5T686 147 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 PIWIL3Q7Z3Z3 882 aaKnown RBP10.76□□□□□ -0.69
SKA3-206ENST00000475251 SCAIQ8N9R8 606 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 GLB1L3Q8NCI6 653 aaPredicted RBP10.76□□□□□ -0.69
SKA3-206ENST00000475251 OR6S1Q8NH40 331 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 SYNPRQ8TBG9 265 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 SLC38A5Q8WUX1 472 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 DNAJA4Q8WW22 397 aaPredicted RBP10.76□□□□□ -0.69
SKA3-206ENST00000475251 RAB1CQ92928 201 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 TAAR8Q969N4 342 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 EPYCQ99645 322 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 ASPNQ9BXN1 380 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 C1orf198Q9H425 327 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 C7orf69Q9H7B7 122 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 ESM1Q9NQ30 184 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 DECR2Q9NUI1 292 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 LGALS13Q9UHV8 139 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 PPIAL4AQ9Y536 164 aa10.76□□□□□ -0.69
SKA3-206ENST00000475251 A0A087WUJ7 227 aa10.75□□□□□ -0.69
SKA3-206ENST00000475251 IGHV1-69-2A0A0G2JMI3 117 aa10.75□□□□□ -0.69
SKA3-206ENST00000475251 TPD52L2O43399 206 aaKnown RBP10.75□□□□□ -0.69
SKA3-206ENST00000475251 ITM2AO43736 263 aa10.75□□□□□ -0.69
SKA3-206ENST00000475251 DEAF1O75398 565 aaPredicted RBP10.75□□□□□ -0.69
SKA3-206ENST00000475251 ANP32DO95626 131 aa10.75□□□□□ -0.69
SKA3-206ENST00000475251 PTHP01270 115 aa10.75□□□□□ -0.69
SKA3-206ENST00000475251 IGHV2-5P01817 119 aa10.75□□□□□ -0.69
SKA3-206ENST00000475251 IL6P05231 212 aa10.75□□□□□ -0.69
SKA3-206ENST00000475251 UFM1P61960 85 aa10.75□□□□□ -0.69
SKA3-206ENST00000475251 RBBP4Q09028 425 aa10.75□□□□□ -0.69
SKA3-206ENST00000475251 RAB39AQ14964 217 aa10.75□□□□□ -0.69
SKA3-206ENST00000475251 ALG10BQ5I7T1 473 aa10.75□□□□□ -0.69
SKA3-206ENST00000475251 DPPA2Q7Z7J5 298 aa10.75□□□□□ -0.69
SKA3-206ENST00000475251 LSMEM1Q8N8F7 131 aa10.75□□□□□ -0.69
SKA3-206ENST00000475251 C11orf40Q8WZ69 217 aa10.75□□□□□ -0.69
SKA3-206ENST00000475251 SLC41A3Q96GZ6 507 aa10.75□□□□□ -0.69
SKA3-206ENST00000475251 TMEM19Q96HH6 336 aa10.75□□□□□ -0.69
SKA3-206ENST00000475251 GPA33Q99795 319 aa10.75□□□□□ -0.69
SKA3-206ENST00000475251 EMC6Q9BV81 110 aa10.75□□□□□ -0.69
SKA3-206ENST00000475251 NUF2Q9BZD4 464 aa10.75□□□□□ -0.69
SKA3-206ENST00000475251 MEAF6Q9HAF1 191 aa10.75□□□□□ -0.69
SKA3-206ENST00000475251 AIG1Q9NVV5 245 aa10.75□□□□□ -0.69
SKA3-206ENST00000475251 ZNF224Q9NZL3 707 aa10.75□□□□□ -0.69
SKA3-206ENST00000475251 SELENONQ9NZV5 590 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms