RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 VN1R2Q8NFZ6 395 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 OR2T27Q8NH04 317 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 ABHD4Q8TB40 342 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 MS4A8Q9BY19 250 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 ZNF436Q9C0F3 470 aaPredicted RBP10.13□□□□□ -0.79
VAPB-204ENST00000475243 TINAGL1Q9GZM7 467 aaPredicted RBP10.13□□□□□ -0.79
VAPB-204ENST00000475243 C7orf72A4D263 438 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 FAM166BA8MTA8 275 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 NRG2O14511 850 aaPredicted RBP10.13□□□□□ -0.79
VAPB-204ENST00000475243 IRS1P35568 1242 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 PFN3P60673 137 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 ALKAL2Q6UX46 152 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 SYT13Q7L8C5 426 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 TMPRSS7Q7RTY8 843 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 RDH10Q8IZV5 341 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 TEX37Q96LM6 180 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 NIPSNAP1Q9BPW8 284 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 CNTNAP3Q9BZ76 1288 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 TPRP12270 2363 aaKnown RBP10.13□□□□□ -0.79
VAPB-204ENST00000475243 SLC22A23A1A5C7 686 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 SNCAP37840 140 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 TPMTP51580 245 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 HIST2H3PS2Q5TEC6 136 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 RTL6Q6ICC9 239 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 LSMEM2Q8N112 164 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 SLC37A2Q8TED4 501 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 THOC3Q96J01 351 aaKnown RBP10.13□□□□□ -0.79
VAPB-204ENST00000475243 HDAC8Q9BY41 377 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 MBNL1Q9NR56 388 aaKnown RBP10.13□□□□□ -0.79
VAPB-204ENST00000475243 HSFX1Q9UBD0 423 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 SNX11Q9Y5W9 270 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 AKR7A3O95154 331 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 NOVP48745 357 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 OGFOD3Q6PK18 319 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 FAM213BQ8TBF2 198 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 PATE1Q8WXA2 126 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 NXPE3Q969Y0 559 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 ANKRD9Q96BM1 317 aaPredicted RBP10.13□□□□□ -0.79
VAPB-204ENST00000475243 TOX2Q96NM4 488 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 PIGQQ9BRB3 760 aa10.13□□□□□ -0.79
VAPB-204ENST00000475243 SLC1A3P43003 542 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 KCTD11Q693B1 232 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 OR6T1Q8NGN1 323 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 PIGLQ9Y2B2 252 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 TRAV36DV7A0A075B6V5 113 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 SMLR1H3BR10 107 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 TXNL1O43396 289 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 IL1AP01583 271 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 ADAMTSL4Q6UY14 1074 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 GDF7Q7Z4P5 450 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 ZFP82Q8N141 532 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 GATA6Q92908 595 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 SLC46A1Q96NT5 459 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 SYT11Q9BT88 431 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 LHX6Q9UPM6 363 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 LINC01553A4QN01 128 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 PHF1O43189 567 aaPredicted RBP10.12□□□□□ -0.79
VAPB-204ENST00000475243 CSNK1G2P78368 415 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 MRPS10P82664 201 aaKnown RBP10.12□□□□□ -0.79
VAPB-204ENST00000475243 PLA2G7Q13093 441 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 GLYATL3Q5SZD4 288 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 DCXRQ7Z4W1 244 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 SYT9Q86SS6 491 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 STT3BQ8TCJ2 826 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 LIPHQ8WWY8 451 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 MCOLN1Q9GZU1 580 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 C1orf123Q9NWV4 160 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 TRPM6Q9BX84 2022 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 RRP8O43159 456 aaKnown RBP10.12□□□□□ -0.79
VAPB-204ENST00000475243 GABREP78334 506 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 TESK1Q15569 626 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 MEP1BQ16820 701 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 SPPL3Q8TCT6 385 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 ZBP1Q9H171 429 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 SEMA4GQ9NTN9 838 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 TDRD6O60522 2096 aaKnown RBP10.12□□□□□ -0.79
VAPB-204ENST00000475243 A6NHS1 94 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 M0QYG6 137 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 ELAVL4P26378 380 aaKnown RBP10.12□□□□□ -0.79
VAPB-204ENST00000475243 CLINT1Q14677 625 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 OVCH1Q7RTY7 1134 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 SLC16A11Q8NCK7 471 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 ADAM29Q9UKF5 820 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 CSO75390 466 aaKnown RBP10.12□□□□□ -0.79
VAPB-204ENST00000475243 CDK4P11802 303 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 ZNF93P35789 620 aaPredicted RBP10.12□□□□□ -0.79
VAPB-204ENST00000475243 CYB561P49447 251 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 FOXK2Q01167 660 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 CAMK2BQ13554 666 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 PRSS45Q7RTY3 260 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 YRDCQ86U90 279 aaKnown RBP10.12□□□□□ -0.79
VAPB-204ENST00000475243 EGFL6Q8IUX8 553 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 OR7G1Q8NGA0 311 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 PPA2Q9H2U2 334 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 MCM3APO60318 1980 aa10.12□□□□□ -0.79
VAPB-204ENST00000475243 A0A1B0GTW7 788 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 TLCD2A6NGC4 264 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 RNF212BA8MTL3 300 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 HNRNPFP52597 415 aaKnown RBP10.11□□□□□ -0.79
VAPB-204ENST00000475243 HCCSP53701 268 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms