RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 ARRDC5A6NEK1 342 aa14.89□□□□□ -0.03
SCAF11-206ENST00000474828 RNF13O43567 381 aa14.89□□□□□ -0.03
SCAF11-206ENST00000474828 IGHV3-9P01782 118 aa14.89□□□□□ -0.03
SCAF11-206ENST00000474828 PGA4P0DJD7 388 aa14.89□□□□□ -0.03
SCAF11-206ENST00000474828 PGA3P0DJD8 388 aa14.89□□□□□ -0.03
SCAF11-206ENST00000474828 SAGP10523 405 aaPredicted RBP14.89□□□□□ -0.03
SCAF11-206ENST00000474828 PRF1P14222 555 aa14.89□□□□□ -0.03
SCAF11-206ENST00000474828 SSTR2P30874 369 aa14.89□□□□□ -0.03
SCAF11-206ENST00000474828 GPR4P46093 362 aa14.89□□□□□ -0.03
SCAF11-206ENST00000474828 SH3BGRP55822 239 aaPredicted RBP14.89□□□□□ -0.03
SCAF11-206ENST00000474828 FAPQ12884 760 aa14.89□□□□□ -0.03
SCAF11-206ENST00000474828 SNTB1Q13884 538 aaKnown RBP14.89□□□□□ -0.03
SCAF11-206ENST00000474828 CCNIQ14094 377 aa14.89□□□□□ -0.03
SCAF11-206ENST00000474828 ALG10Q5BKT4 473 aa14.89□□□□□ -0.03
SCAF11-206ENST00000474828 OR7E24Q6IFN5 339 aa14.89□□□□□ -0.03
SCAF11-206ENST00000474828 BHLHA15Q7RTS1 189 aaPredicted RBP14.89□□□□□ -0.03
SCAF11-206ENST00000474828 SPATA24Q86W54 205 aa14.89□□□□□ -0.03
SCAF11-206ENST00000474828 OR13C2Q8NGS9 318 aa14.89□□□□□ -0.03
SCAF11-206ENST00000474828 MAGEE2Q8TD90 523 aaPredicted RBP14.89□□□□□ -0.03
SCAF11-206ENST00000474828 ASB10Q8WXI3 467 aa14.89□□□□□ -0.03
SCAF11-206ENST00000474828 HSD17B8Q92506 261 aa14.89□□□□□ -0.03
SCAF11-206ENST00000474828 S100PBPQ96BU1 408 aa14.89□□□□□ -0.03
SCAF11-206ENST00000474828 FAM46AQ96IP4 442 aaKnown RBP14.89□□□□□ -0.03
SCAF11-206ENST00000474828 TXNIPQ9H3M7 391 aa14.89□□□□□ -0.03
SCAF11-206ENST00000474828 KRCC1Q9NPI7 259 aaPredicted RBP14.89□□□□□ -0.03
SCAF11-206ENST00000474828 ARMC1Q9NVT9 282 aa14.89□□□□□ -0.03
SCAF11-206ENST00000474828 OR5H1A6NKK0 313 aa14.88□□□□□ -0.03
SCAF11-206ENST00000474828 A6NNC1 897 aa14.88□□□□□ -0.03
SCAF11-206ENST00000474828 DEFB108AA8MXU0 73 aa14.88□□□□□ -0.03
SCAF11-206ENST00000474828 C11orf98E9PRG8 122 aa14.88□□□□□ -0.03
SCAF11-206ENST00000474828 TNFRSF11BO00300 401 aa14.88□□□□□ -0.03
SCAF11-206ENST00000474828 CLOCKO15516 846 aa14.88□□□□□ -0.03
SCAF11-206ENST00000474828 FKBP6O75344 327 aa14.88□□□□□ -0.03
SCAF11-206ENST00000474828 CTAG2O75638 210 aa14.88□□□□□ -0.03
SCAF11-206ENST00000474828 LOXP28300 417 aaPredicted RBP14.88□□□□□ -0.03
SCAF11-206ENST00000474828 IFNGR2P38484 337 aa14.88□□□□□ -0.03
SCAF11-206ENST00000474828 DAP3P51398 398 aaKnown RBP14.88□□□□□ -0.03
SCAF11-206ENST00000474828 LGALS3BPQ08380 585 aa14.88□□□□□ -0.03
SCAF11-206ENST00000474828 TSPAN31Q12999 210 aa14.88□□□□□ -0.03
SCAF11-206ENST00000474828 ACKR1Q16570 336 aa14.88□□□□□ -0.03
SCAF11-206ENST00000474828 PHYHD1Q5SRE7 291 aa14.88□□□□□ -0.03
SCAF11-206ENST00000474828 PGBD2Q6P3X8 592 aa14.88□□□□□ -0.03
SCAF11-206ENST00000474828 FAM122BQ7Z309 247 aa14.88□□□□□ -0.03
SCAF11-206ENST00000474828 HDDC2Q7Z4H3 204 aa14.88□□□□□ -0.03
SCAF11-206ENST00000474828 MEX3DQ86XN8 651 aaKnown RBP14.88□□□□□ -0.03
SCAF11-206ENST00000474828 UBE2J2Q8N2K1 259 aa14.88□□□□□ -0.03
SCAF11-206ENST00000474828 ZNF519Q8TB69 540 aa14.88□□□□□ -0.03
SCAF11-206ENST00000474828 EMC6Q9BV81 110 aa14.88□□□□□ -0.03
SCAF11-206ENST00000474828 YY1AP1Q9H869 796 aa14.88□□□□□ -0.03
SCAF11-206ENST00000474828 GPR35Q9HC97 309 aa14.88□□□□□ -0.03
SCAF11-206ENST00000474828 STX18Q9P2W9 335 aaKnown RBP14.88□□□□□ -0.03
SCAF11-206ENST00000474828 UPB1Q9UBR1 384 aa14.88□□□□□ -0.03
SCAF11-206ENST00000474828 TMCC3Q9ULS5 477 aa14.88□□□□□ -0.03
SCAF11-206ENST00000474828 TRAV27A0A087WT01 109 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 A0A1W2PRG6 482 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 ZNF726A6NNF4 738 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 ZNF587BE7ETH6 402 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 SIAH2O43255 324 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 LYZL6O75951 148 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 BCL10O95999 233 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 F13BP05160 661 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 APEHP13798 732 aaKnown RBP14.87□□□□□ -0.03
SCAF11-206ENST00000474828 HOXB1P14653 301 aaPredicted RBP14.87□□□□□ -0.03
SCAF11-206ENST00000474828 BIDP55957 195 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 ACTR3P61158 418 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 TGFBR3Q03167 851 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 FOXD4Q12950 439 aaPredicted RBP14.87□□□□□ -0.03
SCAF11-206ENST00000474828 TAB1Q15750 504 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 MICAQ29983 383 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 C1orf146Q5VVC0 180 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 FAM205BPQ63HN1 556 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 CD300LDQ6UXZ3 194 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 OR51A7Q8NH64 312 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 RSRC1Q96IZ7 334 aaKnown RBP14.87□□□□□ -0.03
SCAF11-206ENST00000474828 KCNK17Q96T54 332 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 MED18Q9BUE0 208 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 DGCR6LQ9BY27 220 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 NELFAQ9H3P2 528 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 REEP1Q9H902 201 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 NTN4Q9HB63 628 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 NRIP3Q9NQ35 241 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 ZNF226Q9NYT6 803 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 DNAJB9Q9UBS3 223 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 AURKCQ9UQB9 309 aa14.87□□□□□ -0.03
SCAF11-206ENST00000474828 OR10H3O60404 316 aa14.86□□□□□ -0.03
SCAF11-206ENST00000474828 NDUFB2O95178 105 aa14.86□□□□□ -0.03
SCAF11-206ENST00000474828 TXNDC12O95881 172 aa14.86□□□□□ -0.03
SCAF11-206ENST00000474828 CST1P01037 141 aa14.86□□□□□ -0.03
SCAF11-206ENST00000474828 HRGP04196 525 aa14.86□□□□□ -0.03
SCAF11-206ENST00000474828 CD14P08571 375 aa14.86□□□□□ -0.03
SCAF11-206ENST00000474828 PAX7P23759 505 aa14.86□□□□□ -0.03
SCAF11-206ENST00000474828 IL32P24001 234 aa14.86□□□□□ -0.03
SCAF11-206ENST00000474828 DNAJA1P31689 397 aaKnown RBP14.86□□□□□ -0.03
SCAF11-206ENST00000474828 RPL27P61353 136 aaKnown RBP14.86□□□□□ -0.03
SCAF11-206ENST00000474828 ROR2Q01974 943 aaKnown RBP14.86□□□□□ -0.03
SCAF11-206ENST00000474828 RUNX1T1Q06455 604 aa14.86□□□□□ -0.03
SCAF11-206ENST00000474828 GABPB1Q06547 395 aaPredicted RBP14.86□□□□□ -0.03
SCAF11-206ENST00000474828 TSC22D1Q15714 1073 aa14.86□□□□□ -0.03
SCAF11-206ENST00000474828 ANKRD34AQ69YU3 496 aa14.86□□□□□ -0.03
SCAF11-206ENST00000474828 LRFN4Q6PJG9 635 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms