RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 ZNF726A6NNF4 738 aa15.61■□□□□ 0.09
UPF3A-203ENST00000474056 RNF13O43567 381 aa15.61■□□□□ 0.09
UPF3A-203ENST00000474056 LY6G6DO95868 133 aa15.61■□□□□ 0.09
UPF3A-203ENST00000474056 IGKV3-15P01624 115 aa15.61■□□□□ 0.09
UPF3A-203ENST00000474056 IGLV1-44P01699 117 aa15.61■□□□□ 0.09
UPF3A-203ENST00000474056 MT-ND1P03886 318 aa15.61■□□□□ 0.09
UPF3A-203ENST00000474056 CELA3BP08861 270 aa15.61■□□□□ 0.09
UPF3A-203ENST00000474056 SLC7A2P52569 658 aa15.61■□□□□ 0.09
UPF3A-203ENST00000474056 SELENOWP63302 87 aa15.61■□□□□ 0.09
UPF3A-203ENST00000474056 MELKQ14680 651 aa15.61■□□□□ 0.09
UPF3A-203ENST00000474056 SLC35D2Q76EJ3 337 aa15.61■□□□□ 0.09
UPF3A-203ENST00000474056 OR6N1Q8NGY5 312 aa15.61■□□□□ 0.09
UPF3A-203ENST00000474056 HS6ST2Q96MM7 605 aa15.61■□□□□ 0.09
UPF3A-203ENST00000474056 ULBP2Q9BZM5 246 aa15.61■□□□□ 0.09
UPF3A-203ENST00000474056 MYLK2Q9H1R3 596 aa15.61■□□□□ 0.09
UPF3A-203ENST00000474056 C20orf141Q9NUB4 165 aa15.61■□□□□ 0.09
UPF3A-203ENST00000474056 RIMS3Q9UJD0 308 aa15.61■□□□□ 0.09
UPF3A-203ENST00000474056 AP3M1Q9Y2T2 418 aa15.61■□□□□ 0.09
UPF3A-203ENST00000474056 YLPM1P49750 1951 aaKnown RBP15.61■□□□□ 0.09
UPF3A-203ENST00000474056 FN1P02751 2386 aaKnown RBP15.61■□□□□ 0.09
UPF3A-203ENST00000474056 HEXAP06865 529 aa15.6■□□□□ 0.09
UPF3A-203ENST00000474056 PAX7P23759 505 aa15.6■□□□□ 0.09
UPF3A-203ENST00000474056 CALCRP30988 508 aa15.6■□□□□ 0.09
UPF3A-203ENST00000474056 RBM34P42696 430 aaKnown RBP15.6■□□□□ 0.09
UPF3A-203ENST00000474056 CAPZA2P47755 286 aa15.6■□□□□ 0.09
UPF3A-203ENST00000474056 NUDT2P50583 147 aa15.6■□□□□ 0.09
UPF3A-203ENST00000474056 NAAAQ02083 359 aa15.6■□□□□ 0.09
UPF3A-203ENST00000474056 ETFDHQ16134 617 aa15.6■□□□□ 0.09
UPF3A-203ENST00000474056 HACD2Q6Y1H2 254 aa15.6■□□□□ 0.09
UPF3A-203ENST00000474056 NANOGNBQ7Z5D8 188 aa15.6■□□□□ 0.09
UPF3A-203ENST00000474056 VTCN1Q7Z7D3 282 aa15.6■□□□□ 0.09
UPF3A-203ENST00000474056 MDP1Q86V88 176 aa15.6■□□□□ 0.09
UPF3A-203ENST00000474056 TMEM239Q8WW34 195 aa15.6■□□□□ 0.09
UPF3A-203ENST00000474056 HOPXQ9BPY8 73 aaPredicted RBP15.6■□□□□ 0.09
UPF3A-203ENST00000474056 KCNS3Q9BQ31 491 aa15.6■□□□□ 0.09
UPF3A-203ENST00000474056 KATNB1Q9BVA0 655 aa15.6■□□□□ 0.09
UPF3A-203ENST00000474056 EFCAB1Q9HAE3 211 aa15.6■□□□□ 0.09
UPF3A-203ENST00000474056 B3GAT2Q9NPZ5 323 aa15.6■□□□□ 0.09
UPF3A-203ENST00000474056 A4GNTQ9UNA3 340 aa15.6■□□□□ 0.09
UPF3A-203ENST00000474056 ZANQ9Y493 2812 aa15.6■□□□□ 0.09
UPF3A-203ENST00000474056 ABCA1O95477 2261 aa15.6■□□□□ 0.09
UPF3A-203ENST00000474056 NSD1Q96L73 2696 aaPredicted RBP15.6■□□□□ 0.09
UPF3A-203ENST00000474056 BLOC1S5-TXNDC5H3BN57 136 aa15.59■□□□□ 0.09
UPF3A-203ENST00000474056 CXCR6O00574 342 aa15.59■□□□□ 0.09
UPF3A-203ENST00000474056 PIP5K1CO60331 668 aa15.59■□□□□ 0.09
UPF3A-203ENST00000474056 HIST1H2ABP04908 130 aa15.59■□□□□ 0.09
UPF3A-203ENST00000474056 CBR1P16152 277 aa15.59■□□□□ 0.09
UPF3A-203ENST00000474056 HOXB4P17483 251 aaPredicted RBP15.59■□□□□ 0.09
UPF3A-203ENST00000474056 DRD4P21917 467 aa15.59■□□□□ 0.09
UPF3A-203ENST00000474056 FUT4P22083 530 aa15.59■□□□□ 0.09
UPF3A-203ENST00000474056 APOBEC3AP31941 199 aaPredicted RBP15.59■□□□□ 0.09
UPF3A-203ENST00000474056 CSNK1A1P48729 337 aa15.59■□□□□ 0.09
UPF3A-203ENST00000474056 GSK3BP49841 420 aa15.59■□□□□ 0.09
UPF3A-203ENST00000474056 IDH3GP51553 393 aaPredicted RBP15.59■□□□□ 0.09
UPF3A-203ENST00000474056 NPRL3Q12980 569 aa15.59■□□□□ 0.09
UPF3A-203ENST00000474056 C3orf36Q3SXR2 165 aa15.59■□□□□ 0.09
UPF3A-203ENST00000474056 ZNF813Q6ZN06 617 aa15.59■□□□□ 0.09
UPF3A-203ENST00000474056 HIST3H2AQ7L7L0 130 aa15.59■□□□□ 0.09
UPF3A-203ENST00000474056 FAM169BQ8N8A8 192 aa15.59■□□□□ 0.09
UPF3A-203ENST00000474056 OR6X1Q8NH79 312 aa15.59■□□□□ 0.09
UPF3A-203ENST00000474056 HTRA1Q92743 480 aa15.59■□□□□ 0.09
UPF3A-203ENST00000474056 HIST1H2ACQ93077 130 aa15.59■□□□□ 0.09
UPF3A-203ENST00000474056 SGTBQ96EQ0 304 aa15.59■□□□□ 0.09
UPF3A-203ENST00000474056 POM121Q96HA1 1249 aa15.59■□□□□ 0.09
UPF3A-203ENST00000474056 PRRC1Q96M27 445 aa15.59■□□□□ 0.09
UPF3A-203ENST00000474056 ADAD1Q96M93 576 aaKnown RBP15.59■□□□□ 0.09
UPF3A-203ENST00000474056 FOXB1Q99853 325 aa15.59■□□□□ 0.09
UPF3A-203ENST00000474056 POFUT2Q9Y2G5 429 aa15.59■□□□□ 0.09
UPF3A-203ENST00000474056 NF1P21359 2839 aa15.59■□□□□ 0.09
UPF3A-203ENST00000474056 RTTNQ86VV8 2226 aa15.59■□□□□ 0.09
UPF3A-203ENST00000474056 FAM171A2A8MVW0 826 aa15.58■□□□□ 0.08
UPF3A-203ENST00000474056 J3KTA2 159 aa15.58■□□□□ 0.08
UPF3A-203ENST00000474056 SNX3O60493 162 aa15.58■□□□□ 0.08
UPF3A-203ENST00000474056 OR7A10O76100 309 aa15.58■□□□□ 0.08
UPF3A-203ENST00000474056 CRYAAP02489 173 aa15.58■□□□□ 0.08
UPF3A-203ENST00000474056 B4GALT1P15291 398 aa15.58■□□□□ 0.08
UPF3A-203ENST00000474056 FUT1P19526 365 aa15.58■□□□□ 0.08
UPF3A-203ENST00000474056 LSP1P33241 339 aa15.58■□□□□ 0.08
UPF3A-203ENST00000474056 YAP1P46937 504 aaKnown RBP15.58■□□□□ 0.08
UPF3A-203ENST00000474056 GYS2P54840 703 aa15.58■□□□□ 0.08
UPF3A-203ENST00000474056 RPL18Q07020 188 aaKnown RBP15.58■□□□□ 0.08
UPF3A-203ENST00000474056 DNM1P46Q6ZS02 220 aa15.58■□□□□ 0.08
UPF3A-203ENST00000474056 CBLL1Q75N03 491 aa15.58■□□□□ 0.08
UPF3A-203ENST00000474056 ZNF627Q7L945 461 aa15.58■□□□□ 0.08
UPF3A-203ENST00000474056 MAPK1IP1LQ8NDC0 245 aa15.58■□□□□ 0.08
UPF3A-203ENST00000474056 LZICQ8WZA0 190 aa15.58■□□□□ 0.08
UPF3A-203ENST00000474056 TMEM54Q969K7 222 aa15.58■□□□□ 0.08
UPF3A-203ENST00000474056 NSRP1Q9H0G5 558 aaKnown RBP15.58■□□□□ 0.08
UPF3A-203ENST00000474056 BARX1Q9HBU1 254 aaPredicted RBP15.58■□□□□ 0.08
UPF3A-203ENST00000474056 NOX3Q9HBY0 568 aa15.58■□□□□ 0.08
UPF3A-203ENST00000474056 MOV10Q9HCE1 1003 aaKnown RBP15.58■□□□□ 0.08
UPF3A-203ENST00000474056 GLTPQ9NZD2 209 aa15.58■□□□□ 0.08
UPF3A-203ENST00000474056 ZNF224Q9NZL3 707 aa15.58■□□□□ 0.08
UPF3A-203ENST00000474056 SNX13Q9Y5W8 968 aa15.58■□□□□ 0.08
UPF3A-203ENST00000474056 RNF223E7ERA6 249 aa15.57■□□□□ 0.08
UPF3A-203ENST00000474056 GSTA4O15217 222 aa15.57■□□□□ 0.08
UPF3A-203ENST00000474056 SSX4O60224 188 aa15.57■□□□□ 0.08
UPF3A-203ENST00000474056 ZNF682O95780 498 aa15.57■□□□□ 0.08
UPF3A-203ENST00000474056 IGF2P01344 180 aa15.57■□□□□ 0.08
UPF3A-203ENST00000474056 HLA-HP01893 362 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms