RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 RAB3BP20337 219 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 SLC2A5P22732 501 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 ITPKBP27987 946 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 DDOSTP39656 456 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 HTR3AP46098 478 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 PITPNBP48739 271 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 EVX1P49640 407 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 GDI2P50395 445 aaKnown RBP5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 SLC25A1P53007 311 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 AP3S2P59780 193 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 SIRPAP78324 504 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 ACY1Q03154 408 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 CBFBQ13951 182 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 EFR3AQ14156 821 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 MFSD13AQ14CX5 517 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 CDK5R1Q15078 307 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 ZNF79Q15937 498 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 ACSM3Q53FZ2 586 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 HSD17B12Q53GQ0 312 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 KLHL26Q53HC5 615 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 ALG10Q5BKT4 473 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 CT45A2Q5DJT8 189 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 TRIM61Q5EBN2 209 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 FAAH2Q6GMR7 532 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 PYHIN1Q6K0P9 492 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 SFXN4Q6P4A7 337 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 LEG1Q6P5S2 330 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 LRRN1Q6UXK5 716 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 NPSR1Q6W5P4 371 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 DGAT2L6Q6ZPD8 337 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 NCCRP1Q6ZVX7 275 aaPredicted RBP5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 TRILQ7L0X0 811 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 OVCH1Q7RTY7 1134 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 PRSS42Q7Z5A4 293 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 SLC35F3Q8IY50 421 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 METTL27Q8N6F8 245 aaPredicted RBP5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 SAMD12Q8N8I0 201 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 ZNF615Q8N8J6 731 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 ZNF485Q8NCK3 441 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 OR4N2Q8NGD1 307 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 METTL21AQ8WXB1 218 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 TMEM234Q8WY98 164 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 ITFG2Q969R8 447 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 C3orf49Q96BT1 292 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 CMTM3Q96MX0 182 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 GPX7Q96SL4 187 aaPredicted RBP5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 DPYSL5Q9BPU6 564 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 C7orf50Q9BRJ6 194 aaKnown RBP5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 SPRTNQ9H040 489 aaPredicted RBP5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 COMMD4Q9H0A8 199 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 ERVMER34-1Q9H9K5 563 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 ISG20L2Q9H9L3 353 aaKnown RBP5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 FKRPQ9H9S5 495 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 MEPEQ9NQ76 525 aaPredicted RBP5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 TMEM74BQ9NUR3 256 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 RBFOX1Q9NWB1 397 aaKnown RBP5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 STMN3Q9NZ72 180 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 COPZ2Q9P299 210 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 WNT16Q9UBV4 365 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 TBC1D24Q9ULP9 559 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 YARS2Q9Y2Z4 477 aaKnown RBP5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 MAU2Q9Y6X3 613 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 COL4A2P08572 1712 aa5.34□□□□□ -1.56
ATPAF1-204ENST00000474020 TRAV36DV7A0A075B6V5 113 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 IGHV5-51A0A0C4DH38 117 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 TEX13CA0A0J9YWL9 993 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 A0A1W2PQD3 144 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 A0A1W2PRG6 482 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 MEIOCA2RUB1 952 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 SMIM30A4D0T7 59 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 A8MUA0 341 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 MCIDASD6RGH6 385 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 LRRN3E7EW58 273 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 TFECO14948 347 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 YKT6O15498 198 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 OGG1O15527 345 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 SEC14L5O43304 696 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 SDC3O75056 442 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 ATP6V1G1O75348 118 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 PIAS2O75928 621 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 AHSA1O95433 338 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 DHFRP00374 187 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 IGKV1D-16P01601 117 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 HLA-DQB1P01920 261 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 YES1P07947 543 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 NGFRP08138 427 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 PSKH1P11801 424 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 SPNP16150 400 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 HIST1H1CP16403 213 aaKnown RBP5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 SPI1P17947 270 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 NPR2P20594 1047 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 HLA-DMAP28067 261 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 SDHAP31040 664 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 ACVR1BP36896 505 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 CD79BP40259 229 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 NAA10P41227 235 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 TGM4P49221 684 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 POLR2HP52434 150 aaKnown RBP5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 GFERP55789 205 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 SLC37A1P57057 533 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms