RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 BPIFA2Q96DR5 249 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 NMNAT1Q9HAN9 279 aaPredicted RBP16.56■□□□□ 0.24
PTCD3-210ENST00000473829 EDARQ9UNE0 448 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 ZNF469Q96JG9 3925 aaPredicted RBP16.56■□□□□ 0.24
PTCD3-210ENST00000473829 ABCD4O14678 606 aa16.55■□□□□ 0.24
PTCD3-210ENST00000473829 GMNNO75496 209 aa16.55■□□□□ 0.24
PTCD3-210ENST00000473829 ATP6V1B2P21281 511 aa16.55■□□□□ 0.24
PTCD3-210ENST00000473829 HOXC12P31275 282 aa16.55■□□□□ 0.24
PTCD3-210ENST00000473829 ZNF672Q499Z4 452 aaPredicted RBP16.55■□□□□ 0.24
PTCD3-210ENST00000473829 ANKRD16Q6P6B7 361 aa16.55■□□□□ 0.24
PTCD3-210ENST00000473829 C20orf204Q6ZNR8 217 aa16.55■□□□□ 0.24
PTCD3-210ENST00000473829 ACOT11Q8WXI4 607 aaPredicted RBP16.55■□□□□ 0.24
PTCD3-210ENST00000473829 LRR1Q96L50 414 aa16.55■□□□□ 0.24
PTCD3-210ENST00000473829 NSMCE2Q96MF7 247 aa16.55■□□□□ 0.24
PTCD3-210ENST00000473829 ALPK1Q96QP1 1244 aa16.55■□□□□ 0.24
PTCD3-210ENST00000473829 CCL19Q99731 98 aa16.55■□□□□ 0.24
PTCD3-210ENST00000473829 ZNF503-AS2A6NEH8 195 aa16.54■□□□□ 0.24
PTCD3-210ENST00000473829 ZNF726A6NNF4 738 aa16.54■□□□□ 0.24
PTCD3-210ENST00000473829 CD40P25942 277 aa16.54■□□□□ 0.24
PTCD3-210ENST00000473829 SH3BGRP55822 239 aaPredicted RBP16.54■□□□□ 0.24
PTCD3-210ENST00000473829 PRPS1P60891 318 aa16.54■□□□□ 0.24
PTCD3-210ENST00000473829 RPS4XP62701 263 aaKnown RBP16.54■□□□□ 0.24
PTCD3-210ENST00000473829 PRKCDQ05655 676 aa16.54■□□□□ 0.24
PTCD3-210ENST00000473829 RUNX1T1Q06455 604 aa16.54■□□□□ 0.24
PTCD3-210ENST00000473829 FHL1Q13642 323 aa16.54■□□□□ 0.24
PTCD3-210ENST00000473829 SPATS1Q496A3 300 aa16.54■□□□□ 0.24
PTCD3-210ENST00000473829 KLHL24Q6TFL4 600 aa16.54■□□□□ 0.24
PTCD3-210ENST00000473829 TMEM108Q6UXF1 575 aa16.54■□□□□ 0.24
PTCD3-210ENST00000473829 SPNS3Q6ZMD2 512 aa16.54■□□□□ 0.24
PTCD3-210ENST00000473829 CYP4Z1Q86W10 505 aa16.54■□□□□ 0.24
PTCD3-210ENST00000473829 ZNF611Q8N823 705 aa16.54■□□□□ 0.24
PTCD3-210ENST00000473829 OR6N1Q8NGY5 312 aa16.54■□□□□ 0.24
PTCD3-210ENST00000473829 OR6X1Q8NH79 312 aa16.54■□□□□ 0.24
PTCD3-210ENST00000473829 SLC7A13Q8TCU3 470 aa16.54■□□□□ 0.24
PTCD3-210ENST00000473829 MAGEE2Q8TD90 523 aaPredicted RBP16.54■□□□□ 0.24
PTCD3-210ENST00000473829 TMEM54Q969K7 222 aa16.54■□□□□ 0.24
PTCD3-210ENST00000473829 PYURFQ96I23 114 aa16.54■□□□□ 0.24
PTCD3-210ENST00000473829 ULBP2Q9BZM5 246 aa16.54■□□□□ 0.24
PTCD3-210ENST00000473829 HIVEP1P15822 2718 aa16.54■□□□□ 0.24
PTCD3-210ENST00000473829 ARPC4-TTLL3A0A0A6YYG9 625 aa16.53■□□□□ 0.24
PTCD3-210ENST00000473829 ZNF99A8MXY4 864 aaPredicted RBP16.53■□□□□ 0.24
PTCD3-210ENST00000473829 PDE5AO76074 875 aa16.53■□□□□ 0.24
PTCD3-210ENST00000473829 H1F0P07305 194 aaKnown RBP16.53■□□□□ 0.24
PTCD3-210ENST00000473829 PGA4P0DJD7 388 aa16.53■□□□□ 0.24
PTCD3-210ENST00000473829 PGA3P0DJD8 388 aa16.53■□□□□ 0.24
PTCD3-210ENST00000473829 RHCEP18577 417 aa16.53■□□□□ 0.24
PTCD3-210ENST00000473829 PTAFRP25105 342 aa16.53■□□□□ 0.24
PTCD3-210ENST00000473829 GPR4P46093 362 aa16.53■□□□□ 0.24
PTCD3-210ENST00000473829 CSNK1A1P48729 337 aa16.53■□□□□ 0.24
PTCD3-210ENST00000473829 LAPTM4AQ15012 233 aa16.53■□□□□ 0.24
PTCD3-210ENST00000473829 PODNL1Q6PEZ8 512 aa16.53■□□□□ 0.24
PTCD3-210ENST00000473829 KLHL17Q6TDP4 642 aa16.53■□□□□ 0.24
PTCD3-210ENST00000473829 CYP2R1Q6VVX0 501 aa16.53■□□□□ 0.24
PTCD3-210ENST00000473829 ZNF730Q6ZMV8 503 aa16.53■□□□□ 0.24
PTCD3-210ENST00000473829 MBOAT2Q6ZWT7 520 aa16.53■□□□□ 0.24
PTCD3-210ENST00000473829 TRPM8Q7Z2W7 1104 aa16.53■□□□□ 0.24
PTCD3-210ENST00000473829 OR13C2Q8NGS9 318 aa16.53■□□□□ 0.24
PTCD3-210ENST00000473829 ASB10Q8WXI3 467 aa16.53■□□□□ 0.24
PTCD3-210ENST00000473829 SLC25A44Q96H78 314 aaPredicted RBP16.53■□□□□ 0.24
PTCD3-210ENST00000473829 DHRS1Q96LJ7 313 aa16.53■□□□□ 0.24
PTCD3-210ENST00000473829 ADAD1Q96M93 576 aaKnown RBP16.53■□□□□ 0.24
PTCD3-210ENST00000473829 ANKRD19PQ9H560 264 aa16.53■□□□□ 0.24
PTCD3-210ENST00000473829 INIPQ9NRY2 104 aa16.53■□□□□ 0.24
PTCD3-210ENST00000473829 BEX4Q9NWD9 120 aaPredicted RBP16.53■□□□□ 0.24
PTCD3-210ENST00000473829 TAS2R1Q9NYW7 299 aa16.53■□□□□ 0.24
PTCD3-210ENST00000473829 HIF3AQ9Y2N7 669 aa16.53■□□□□ 0.24
PTCD3-210ENST00000473829 F8P00451 2351 aa16.52■□□□□ 0.24
PTCD3-210ENST00000473829 ITPR3Q14573 2671 aa16.52■□□□□ 0.24
PTCD3-210ENST00000473829 TRAV27A0A087WT01 109 aa16.52■□□□□ 0.24
PTCD3-210ENST00000473829 TRBV4-1A0A0J9YWV2 114 aa16.52■□□□□ 0.24
PTCD3-210ENST00000473829 A0A1W2PRQ8 180 aa16.52■□□□□ 0.24
PTCD3-210ENST00000473829 CDC42EP2O14613 210 aa16.52■□□□□ 0.24
PTCD3-210ENST00000473829 UBOX5O94941 541 aa16.52■□□□□ 0.24
PTCD3-210ENST00000473829 BCL10O95999 233 aa16.52■□□□□ 0.24
PTCD3-210ENST00000473829 WNT11O96014 354 aa16.52■□□□□ 0.24
PTCD3-210ENST00000473829 SAGP10523 405 aaPredicted RBP16.52■□□□□ 0.24
PTCD3-210ENST00000473829 CDH11P55287 796 aa16.52■□□□□ 0.24
PTCD3-210ENST00000473829 DGCR6Q14129 220 aa16.52■□□□□ 0.24
PTCD3-210ENST00000473829 SEC23BQ15437 767 aa16.52■□□□□ 0.24
PTCD3-210ENST00000473829 B3GLCTQ6Y288 498 aa16.52■□□□□ 0.24
PTCD3-210ENST00000473829 KRTAP1-3Q8IUG1 177 aa16.52■□□□□ 0.24
PTCD3-210ENST00000473829 FBXW5Q969U6 566 aa16.52■□□□□ 0.24
PTCD3-210ENST00000473829 PIP5K1AQ99755 562 aa16.52■□□□□ 0.24
PTCD3-210ENST00000473829 FUZQ9BT04 418 aa16.52■□□□□ 0.24
PTCD3-210ENST00000473829 SEC61A2Q9H9S3 476 aa16.52■□□□□ 0.24
PTCD3-210ENST00000473829 OBP2BQ9NPH6 170 aa16.52■□□□□ 0.24
PTCD3-210ENST00000473829 B3GAT2Q9NPZ5 323 aa16.52■□□□□ 0.24
PTCD3-210ENST00000473829 GLTPQ9NZD2 209 aa16.52■□□□□ 0.24
PTCD3-210ENST00000473829 FAM32AQ9Y421 112 aaKnown RBP16.52■□□□□ 0.24
PTCD3-210ENST00000473829 MAGED1Q9Y5V3 778 aaPredicted RBP16.52■□□□□ 0.24
PTCD3-210ENST00000473829 MAP1AP78559 2803 aaPredicted RBP16.52■□□□□ 0.23
PTCD3-210ENST00000473829 PLCE1Q9P212 2302 aa16.52■□□□□ 0.23
PTCD3-210ENST00000473829 HEATR1Q9H583 2144 aaKnown RBP16.51■□□□□ 0.23
PTCD3-210ENST00000473829 IGHV1-18A0A0C4DH31 117 aa16.51■□□□□ 0.23
PTCD3-210ENST00000473829 A0A1W2PRG6 482 aa16.51■□□□□ 0.23
PTCD3-210ENST00000473829 HTR3EA5X5Y0 456 aa16.51■□□□□ 0.23
PTCD3-210ENST00000473829 EFCAB9A8MZ26 197 aa16.51■□□□□ 0.23
PTCD3-210ENST00000473829 SOD3P08294 240 aa16.51■□□□□ 0.23
PTCD3-210ENST00000473829 DANCRP0C864 163 aa16.51■□□□□ 0.23
PTCD3-210ENST00000473829 ZNF26P17031 533 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms