RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, human

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-226	ENST00000473066	PRSS27	Q9BQR3	290 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	ZNF426	Q9BUY5	554 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	KATNB1	Q9BVA0	655 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	CACNG6	Q9BXT2	260 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	MOK	Q9UQ07	419 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	MED31	Q9Y3C7	131 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	IGHV1-18	A0A0C4DH31	117 aa		13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066		A0A1W2PRG6	482 aa		13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	NME4	O00746	187 aa		13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	GMNN	O75496	209 aa		13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	PRDX6	P30041	224 aa		13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	LSP1	P33241	339 aa		13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	GSK3B	P49841	420 aa		13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	IDH3G	P51553	393 aa	Predicted RBP	13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	UGT2B15	P54855	530 aa		13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	GNGT1	P63211	74 aa		13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	ZP4	Q12836	540 aa		13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	NPRL3	Q12980	569 aa		13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	PIN1	Q13526	163 aa	Predicted RBP	13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	C3orf36	Q3SXR2	165 aa		13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	IFI44L	Q53G44	452 aa		13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	ARFGEF3	Q5TH69	2177 aa		13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	CLEC9A	Q6UXN8	241 aa		13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	ZNF813	Q6ZN06	617 aa		13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	TREML1	Q86YW5	311 aa		13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	NKAIN4	Q8IVV8	208 aa		13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	TMEM255B	Q8WV15	326 aa		13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	GEMIN6	Q8WXD5	167 aa	Known RBP	13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	FAM162A	Q96A26	154 aa		13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	TXNDC15	Q96J42	360 aa		13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	KCTD14	Q9BQ13	255 aa	Predicted RBP	13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	NELFA	Q9H3P2	528 aa		13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	GSX1	Q9H4S2	264 aa	Predicted RBP	13.6	□□□□□ -0.23
MRPL55-226	ENST00000473066	MAP1A	P78559	2803 aa	Predicted RBP	13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	GMNC	A6NCL1	334 aa		13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	BLOC1S5-TXNDC5	H3BN57	136 aa		13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	SNX3	O60493	162 aa		13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	OR7A10	O76100	309 aa		13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	BCL10	O95999	233 aa		13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	ASAH2B	P0C7U1	165 aa		13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	CECR9	P0C854	216 aa		13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	APOBEC3A	P31941	199 aa	Predicted RBP	13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	ARR3	P36575	388 aa		13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	NUDT6	P53370	316 aa		13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	NAAA	Q02083	359 aa		13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	MELK	Q14680	651 aa		13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	FKBP9P1	Q75LS8	142 aa		13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	SLC46A3	Q7Z3Q1	461 aa		13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	LRRC17	Q8N6Y2	441 aa		13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	FAM169B	Q8N8A8	192 aa		13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	OR6X1	Q8NH79	312 aa		13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	PFN4	Q8NHR9	129 aa		13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	ZNF566	Q969W8	418 aa		13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	FOXB1	Q99853	325 aa		13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	FNDC11	Q9BVV2	318 aa		13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	MEPE	Q9NQ76	525 aa	Predicted RBP	13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	CRNN	Q9UBG3	495 aa	Predicted RBP	13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	PMF1-BGLAP	U3KQ54	211 aa		13.59	□□□□□ -0.23
MRPL55-226	ENST00000473066	VSTM5	A8MXK1	200 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	IGF2	P01344	180 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	CD8A	P01732	235 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	IGHV4-39	P01824	125 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	IGHG1	P01857	330 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	CD79A	P11912	226 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	B4GALT1	P15291	398 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	CBR1	P16152	277 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	FUT1	P19526	365 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	DRD4	P21917	467 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	DAP3	P51398	398 aa	Known RBP	13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	CLRN1	P58418	232 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	PSME3	P61289	254 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	SNRPD2	P62316	118 aa	Known RBP	13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	RAB35	Q15286	201 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	GSG1	Q2KHT4	349 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	PHYHD1	Q5SRE7	291 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	C11orf71	Q6IPW1	123 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	VTCN1	Q7Z7D3	282 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	MDP1	Q86V88	176 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	CYP4Z1	Q86W10	505 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	OFCC1	Q8IZS5	231 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	OR4F15	Q8NGB8	312 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	ZNF837	Q96EG3	531 aa	Predicted RBP	13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	SLC25A44	Q96H78	314 aa	Predicted RBP	13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	MYLK2	Q9H1R3	596 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	SPAG4	Q9NPE6	437 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	TAS2R5	Q9NYW4	299 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	GLTP	Q9NZD2	209 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	ADA2	Q9NZK5	511 aa		13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	STX18	Q9P2W9	335 aa	Known RBP	13.58	□□□□□ -0.24
MRPL55-226	ENST00000473066	CR1	P17927	2039 aa		13.57	□□□□□ -0.24
MRPL55-226	ENST00000473066	HTR3E	A5X5Y0	456 aa		13.57	□□□□□ -0.24
MRPL55-226	ENST00000473066	FARS2	O95363	451 aa	Known RBP	13.57	□□□□□ -0.24
MRPL55-226	ENST00000473066	RAB36	O95755	333 aa		13.57	□□□□□ -0.24
MRPL55-226	ENST00000473066	SERPINA1	P01009	418 aa		13.57	□□□□□ -0.24
MRPL55-226	ENST00000473066	IGKV3-15	P01624	115 aa		13.57	□□□□□ -0.24
MRPL55-226	ENST00000473066	IGLV1-44	P01699	117 aa		13.57	□□□□□ -0.24
MRPL55-226	ENST00000473066	HEXA	P06865	529 aa		13.57	□□□□□ -0.24
MRPL55-226	ENST00000473066	IFI30	P13284	250 aa		13.57	□□□□□ -0.24
MRPL55-226	ENST00000473066	ACVR1B	P36896	505 aa		13.57	□□□□□ -0.24
MRPL55-226	ENST00000473066	RPL18	Q07020	188 aa	Known RBP	13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms