RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ZNF627Q7L945 461 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 C20orf196Q8IYI0 205 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 GPR137CQ8N3F9 429 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 PAQR4Q8N4S7 273 aaPredicted RBP7.95□□□□□ -1.14
VCL-204ENST00000472585 BHLHE22Q8NFJ8 381 aaPredicted RBP7.95□□□□□ -1.14
VCL-204ENST00000472585 ZNF417Q8TAU3 575 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 STK35Q8TDR2 534 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 SLC38A5Q8WUX1 472 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 GTF3AQ92664 365 aaKnown RBP7.95□□□□□ -1.14
VCL-204ENST00000472585 DVL3Q92997 716 aaPredicted RBP7.95□□□□□ -1.14
VCL-204ENST00000472585 ZNF587Q96SQ5 575 aaPredicted RBP7.95□□□□□ -1.14
VCL-204ENST00000472585 WFDC6Q9BQY6 131 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 MS4A5Q9H3V2 200 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 ZMAT3Q9HA38 289 aaKnown RBP7.95□□□□□ -1.14
VCL-204ENST00000472585 MOV10Q9HCE1 1003 aaKnown RBP7.95□□□□□ -1.14
VCL-204ENST00000472585 ZNF443Q9Y2A4 671 aaPredicted RBP7.95□□□□□ -1.14
VCL-204ENST00000472585 CACNG2Q9Y698 323 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 ARHGAP32A7KAX9 2087 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 LOC102725191A0A1B0GVB3 256 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 WDR91A4D1P6 747 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 E9PBE3 544 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 J3QLI3 93 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 PRSS23O95084 383 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 MPZL1O95297 269 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 CD79AP11912 226 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 GRPRP30550 384 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 SERPINB5P36952 375 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 ERVS71-1P61550 626 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 HPCAP84074 193 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 MVKQ03426 396 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 ZP4Q12836 540 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 RAB39AQ14964 217 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 MFSD13AQ14CX5 517 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 GTDC1Q4AE62 458 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 FBLN7Q53RD9 439 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 TMEM255AQ5JRV8 349 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 RNF220Q5VTB9 566 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 DCAF12L2Q5VW00 463 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 WDR88Q6ZMY6 472 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 TREML1Q86YW5 311 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 SKA3Q8IX90 412 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 PEX5LQ8IYB4 626 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 ZNF440Q8IYI8 595 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 SIGLECL1Q8N7X8 197 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 IL17RDQ8NFM7 739 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 VPS33AQ96AX1 596 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 C1orf147Q96MC9 270 aaPredicted RBP7.94□□□□□ -1.14
VCL-204ENST00000472585 DUX5Q96PT3 197 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 PANX1Q96RD7 426 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 CCT8L2Q96SF2 557 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 ZNF665Q9H7R5 613 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 PNPOQ9NVS9 261 aa7.94□□□□□ -1.14
VCL-204ENST00000472585 LRRN3E7EW58 273 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 AHSA1O95433 338 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 BCHEP06276 602 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 CCL2P13500 99 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 UQCRBP14927 111 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 B4GALT1P15291 398 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 HTR2AP28223 471 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 GCH1P30793 250 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 PTDSS1P48651 473 aaKnown RBP7.93□□□□□ -1.14
VCL-204ENST00000472585 RAB1AP62820 205 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 CCL8P80075 99 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 MRPS11P82912 194 aaKnown RBP7.93□□□□□ -1.14
VCL-204ENST00000472585 MPP2Q14168 576 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 GSG1Q2KHT4 349 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 LIN52Q52LA3 116 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 SPRNQ5BIV9 151 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 H1FNTQ75WM6 255 aaPredicted RBP7.93□□□□□ -1.14
VCL-204ENST00000472585 NUDCD3Q8IVD9 361 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 HOMEZQ8IX15 550 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 CCDC36Q8IYA8 594 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 LRRC34Q8IZ02 419 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 PIK3C3Q8NEB9 887 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 VPS37AQ8NEZ2 397 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 SLC25A28Q96A46 364 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 LRRC58Q96CX6 371 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 RAB39BQ96DA2 213 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 SLC41A3Q96GZ6 507 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 ZIM3Q96PE6 472 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 OR52E6Q96RD3 313 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 GPA33Q99795 319 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 ZNF416Q9BWM5 594 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 SPATA9Q9BWV2 254 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 NUF2Q9BZD4 464 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 C7orf69Q9H7B7 122 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 PPCSQ9HAB8 311 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 LGALS13Q9UHV8 139 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 DUSP13Q9UII6 198 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 GPR45Q9Y5Y3 372 aa7.93□□□□□ -1.14
VCL-204ENST00000472585 SOX21Q9Y651 276 aaPredicted RBP7.93□□□□□ -1.14
VCL-204ENST00000472585 A0A096LPI6 279 aa7.92□□□□□ -1.14
VCL-204ENST00000472585 DNAJC9-AS1A6NH13 148 aa7.92□□□□□ -1.14
VCL-204ENST00000472585 SDHDO14521 159 aa7.92□□□□□ -1.14
VCL-204ENST00000472585 TPST2O60704 377 aa7.92□□□□□ -1.14
VCL-204ENST00000472585 IGHV2-5P01817 119 aa7.92□□□□□ -1.14
VCL-204ENST00000472585 BGLAPP02818 100 aa7.92□□□□□ -1.14
VCL-204ENST00000472585 LBPP18428 481 aa7.92□□□□□ -1.14
VCL-204ENST00000472585 NCF2P19878 526 aaPredicted RBP7.92□□□□□ -1.14
VCL-204ENST00000472585 GATA3P23771 443 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms