RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 CD40P25942 277 aa13.17□□□□□ -0.3
CALD1-215ENST00000472096 YAP1P46937 504 aaKnown RBP13.17□□□□□ -0.3
CALD1-215ENST00000472096 CDH11P55287 796 aa13.17□□□□□ -0.3
CALD1-215ENST00000472096 ST3GAL3Q11203 375 aa13.17□□□□□ -0.3
CALD1-215ENST00000472096 FOXD4Q12950 439 aaPredicted RBP13.17□□□□□ -0.3
CALD1-215ENST00000472096 CEACAM16Q2WEN9 425 aa13.17□□□□□ -0.3
CALD1-215ENST00000472096 CARD17Q5XLA6 110 aa13.17□□□□□ -0.3
CALD1-215ENST00000472096 ANKRD16Q6P6B7 361 aa13.17□□□□□ -0.3
CALD1-215ENST00000472096 TGIF2LYQ8IUE0 185 aa13.17□□□□□ -0.3
CALD1-215ENST00000472096 C20orf196Q8IYI0 205 aa13.17□□□□□ -0.3
CALD1-215ENST00000472096 LRRC75A-AS1Q8N1F1 130 aa13.17□□□□□ -0.3
CALD1-215ENST00000472096 RNF148Q8N7C7 305 aa13.17□□□□□ -0.3
CALD1-215ENST00000472096 RBM15BQ8NDT2 890 aaKnown RBP13.17□□□□□ -0.3
CALD1-215ENST00000472096 MAGEE2Q8TD90 523 aaPredicted RBP13.17□□□□□ -0.3
CALD1-215ENST00000472096 BCL2L2Q92843 193 aaPredicted RBP13.17□□□□□ -0.3
CALD1-215ENST00000472096 SGTBQ96EQ0 304 aa13.17□□□□□ -0.3
CALD1-215ENST00000472096 HS6ST2Q96MM7 605 aa13.17□□□□□ -0.3
CALD1-215ENST00000472096 C1QTNF6Q9BXI9 259 aa13.17□□□□□ -0.3
CALD1-215ENST00000472096 CRLF2Q9HC73 371 aa13.17□□□□□ -0.3
CALD1-215ENST00000472096 MAN2C1Q9NTJ4 1040 aa13.17□□□□□ -0.3
CALD1-215ENST00000472096 MED31Q9Y3C7 131 aa13.17□□□□□ -0.3
CALD1-215ENST00000472096 ZNF469Q96JG9 3925 aaPredicted RBP13.16□□□□□ -0.3
CALD1-215ENST00000472096 ARPC4-TTLL3A0A0A6YYG9 625 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 M0R3G1 203 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 RNF13O43567 381 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 PRSS23O95084 383 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 FAM107AO95990 144 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 HIST1H2ABP04908 130 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 DANCRP0C864 163 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 HSD17B1P14061 328 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 IFNGR1P15260 489 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 FUT4P22083 530 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 IFNA8P32881 189 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 BIDP55957 195 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 ADAM8P78325 824 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 ARF1P84077 181 aaKnown RBP13.16□□□□□ -0.3
CALD1-215ENST00000472096 RPL18Q07020 188 aaKnown RBP13.16□□□□□ -0.3
CALD1-215ENST00000472096 CAMK2DQ13557 499 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 FXNQ16595 210 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 GKAP1Q5VSY0 366 aaPredicted RBP13.16□□□□□ -0.3
CALD1-215ENST00000472096 FKBP9P1Q75LS8 142 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 SLC35D2Q76EJ3 337 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 HIST3H2AQ7L7L0 130 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 FAM156AQ8NDB6 213 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 TMEM171Q8WVE6 324 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 HIST1H2ACQ93077 130 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 ZNF837Q96EG3 531 aaPredicted RBP13.16□□□□□ -0.3
CALD1-215ENST00000472096 LRR1Q96L50 414 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 ADAD1Q96M93 576 aaKnown RBP13.16□□□□□ -0.3
CALD1-215ENST00000472096 FAM53CQ9NYF3 392 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 RHCGQ9UBD6 479 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 RPS6KA6Q9UK32 745 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 MGAT4BQ9UQ53 548 aa13.16□□□□□ -0.3
CALD1-215ENST00000472096 A0A096LPE4 126 aa13.15□□□□□ -0.3
CALD1-215ENST00000472096 A0A1W2PPZ6 126 aa13.15□□□□□ -0.3
CALD1-215ENST00000472096 ZNF726A6NNF4 738 aa13.15□□□□□ -0.3
CALD1-215ENST00000472096 ZNF99A8MXY4 864 aaPredicted RBP13.15□□□□□ -0.3
CALD1-215ENST00000472096 FFAR1O14842 300 aa13.15□□□□□ -0.3
CALD1-215ENST00000472096 TMCC2O75069 709 aa13.15□□□□□ -0.3
CALD1-215ENST00000472096 FUT1P19526 365 aa13.15□□□□□ -0.3
CALD1-215ENST00000472096 UBE2NP61088 152 aaKnown RBP13.15□□□□□ -0.3
CALD1-215ENST00000472096 NKX6-1P78426 367 aaPredicted RBP13.15□□□□□ -0.3
CALD1-215ENST00000472096 MELKQ14680 651 aa13.15□□□□□ -0.3
CALD1-215ENST00000472096 PGGHGQ32M88 737 aa13.15□□□□□ -0.3
CALD1-215ENST00000472096 Q5PR19 223 aa13.15□□□□□ -0.3
CALD1-215ENST00000472096 GLYATQ6IB77 296 aa13.15□□□□□ -0.3
CALD1-215ENST00000472096 FITM2Q8N6M3 262 aa13.15□□□□□ -0.3
CALD1-215ENST00000472096 WFDC11Q8NEX6 87 aa13.15□□□□□ -0.3
CALD1-215ENST00000472096 OR6X1Q8NH79 312 aa13.15□□□□□ -0.3
CALD1-215ENST00000472096 LIPHQ8WWY8 451 aa13.15□□□□□ -0.3
CALD1-215ENST00000472096 PERPQ96FX8 193 aa13.15□□□□□ -0.3
CALD1-215ENST00000472096 RADILQ96JH8 1075 aa13.15□□□□□ -0.3
CALD1-215ENST00000472096 FNDC11Q9BVV2 318 aa13.15□□□□□ -0.3
CALD1-215ENST00000472096 GSX2Q9BZM3 304 aa13.15□□□□□ -0.3
CALD1-215ENST00000472096 ULBP2Q9BZM5 246 aa13.15□□□□□ -0.3
CALD1-215ENST00000472096 CXorf56Q9H5V9 222 aa13.15□□□□□ -0.3
CALD1-215ENST00000472096 B3GAT2Q9NPZ5 323 aa13.15□□□□□ -0.3
CALD1-215ENST00000472096 NDE1Q9NXR1 346 aa13.15□□□□□ -0.3
CALD1-215ENST00000472096 LAMP3Q9UQV4 416 aa13.15□□□□□ -0.3
CALD1-215ENST00000472096 FLNAP21333 2647 aaKnown RBP13.15□□□□□ -0.3
CALD1-215ENST00000472096 BLOC1S5-TXNDC5H3BN57 136 aa13.14□□□□□ -0.31
CALD1-215ENST00000472096 SEC14L2O76054 403 aa13.14□□□□□ -0.31
CALD1-215ENST00000472096 SOD3P08294 240 aa13.14□□□□□ -0.31
CALD1-215ENST00000472096 TSPAN19P0C672 248 aa13.14□□□□□ -0.31
CALD1-215ENST00000472096 IFI30P13284 250 aa13.14□□□□□ -0.31
CALD1-215ENST00000472096 PAX1P15863 534 aa13.14□□□□□ -0.31
CALD1-215ENST00000472096 TCN1P20061 433 aaPredicted RBP13.14□□□□□ -0.31
CALD1-215ENST00000472096 CSNK1A1P48729 337 aa13.14□□□□□ -0.31
CALD1-215ENST00000472096 PTH2RP49190 550 aa13.14□□□□□ -0.31
CALD1-215ENST00000472096 RPS4XP62701 263 aaKnown RBP13.14□□□□□ -0.31
CALD1-215ENST00000472096 TUBA1BP68363 451 aa13.14□□□□□ -0.31
CALD1-215ENST00000472096 TUBA4AP68366 448 aa13.14□□□□□ -0.31
CALD1-215ENST00000472096 KRT72Q14CN4 511 aa13.14□□□□□ -0.31
CALD1-215ENST00000472096 TRAM2Q15035 370 aa13.14□□□□□ -0.31
CALD1-215ENST00000472096 SAMD4BQ5PRF9 694 aaKnown RBP13.14□□□□□ -0.31
CALD1-215ENST00000472096 SHEQ5VZ18 495 aa13.14□□□□□ -0.31
CALD1-215ENST00000472096 SLC22A25Q6T423 547 aa13.14□□□□□ -0.31
CALD1-215ENST00000472096 C16orf89Q6UX73 402 aa13.14□□□□□ -0.31
CALD1-215ENST00000472096 B3GLCTQ6Y288 498 aa13.14□□□□□ -0.31
CALD1-215ENST00000472096 TUBA1AQ71U36 451 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms