RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 FBN2P35556 2912 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 SH3PXD2BA1X283 911 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 CENPBD1B2RD01 187 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 CLOCKO15516 846 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 F13BP05160 661 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 HOXB1P14653 301 aaPredicted RBP13.42□□□□□ -0.26
SDC3-203ENST00000471567 PAX7P23759 505 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 LOXP28300 417 aaPredicted RBP13.42□□□□□ -0.26
SDC3-203ENST00000471567 RRM2P31350 389 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 OMPP47874 163 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 DAP3P51398 398 aaKnown RBP13.42□□□□□ -0.26
SDC3-203ENST00000471567 HMGA2P52926 109 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 PRPS1P60891 318 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 CAMK2DQ13557 499 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 FHL1Q13642 323 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 LAPTM4AQ15012 233 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 SEC23BQ15437 767 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 ALG10Q5BKT4 473 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 CARD17Q5XLA6 110 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 OR1K1Q8NGR3 316 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 OR6N1Q8NGY5 312 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 MAGEE2Q8TD90 523 aaPredicted RBP13.42□□□□□ -0.26
SDC3-203ENST00000471567 TMEM54Q969K7 222 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 PIK3IP1Q96FE7 263 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 SLC25A44Q96H78 314 aaPredicted RBP13.42□□□□□ -0.26
SDC3-203ENST00000471567 ALPK1Q96QP1 1244 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 TNFRSF13CQ96RJ3 184 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 CRLF2Q9HC73 371 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 SLC17A5Q9NRA2 495 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 TMCC3Q9ULS5 477 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 AMDHD2Q9Y303 409 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 SLC25A15Q9Y619 301 aa13.42□□□□□ -0.26
SDC3-203ENST00000471567 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.41□□□□□ -0.26
SDC3-203ENST00000471567 M0R3G1 203 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 CDC42EP2O14613 210 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 RAP2AP10114 183 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 HOXC12P31275 282 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 IFNGR2P38484 337 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 GPR4P46093 362 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 LIMS1P48059 325 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 CSNK1A1P48729 337 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 FLOT2Q14254 428 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 ACKR1Q16570 336 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 CEACAM16Q2WEN9 425 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 ZBED5Q49AG3 693 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 ANKRD16Q6P6B7 361 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 SEZ6L2Q6UXD5 910 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 WDFY1Q8IWB7 410 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 LINC00471Q8N535 108 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 WDR31Q8NA23 367 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 LRRC75AQ8NAA5 344 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 OR51A7Q8NH64 312 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 BCL2L2Q92843 193 aaPredicted RBP13.41□□□□□ -0.26
SDC3-203ENST00000471567 ZNF566Q969W8 418 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 FAM46AQ96IP4 442 aaKnown RBP13.41□□□□□ -0.26
SDC3-203ENST00000471567 NDEL1Q9GZM8 345 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 TXNIPQ9H3M7 391 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 ESRP2Q9H6T0 727 aaKnown RBP13.41□□□□□ -0.26
SDC3-203ENST00000471567 GLTPQ9NZD2 209 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 EDARQ9UNE0 448 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 AURKCQ9UQB9 309 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 POMPQ9Y244 141 aa13.41□□□□□ -0.26
SDC3-203ENST00000471567 MAGED1Q9Y5V3 778 aaPredicted RBP13.41□□□□□ -0.26
SDC3-203ENST00000471567 PRR14LQ5THK1 2151 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 TRAV27A0A087WT01 109 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 ZNF99A8MXY4 864 aaPredicted RBP13.4□□□□□ -0.26
SDC3-203ENST00000471567 MCIDASD6RGH6 385 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 PTP4A3O75365 173 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 WNT11O96014 354 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 IGHG1P01857 330 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 IGHMP01871 453 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 PGA4P0DJD7 388 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 PGA3P0DJD8 388 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 CDH2P19022 906 aaPredicted RBP13.4□□□□□ -0.26
SDC3-203ENST00000471567 ARF1P84077 181 aaKnown RBP13.4□□□□□ -0.26
SDC3-203ENST00000471567 MELKQ14680 651 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 TBRG1Q3YBR2 411 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 PHYHD1Q5SRE7 291 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 NCMAPQ5T1S8 102 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 ARMC4Q5T2S8 1044 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 ALKBH2Q6NS38 261 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 KLHL24Q6TFL4 600 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 ZNF627Q7L945 461 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 MEX3DQ86XN8 651 aaKnown RBP13.4□□□□□ -0.26
SDC3-203ENST00000471567 ADGRG5Q8IZF4 528 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 OR13C2Q8NGS9 318 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 OR52N5Q8NH56 324 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 ASB10Q8WXI3 467 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 PLPPR2Q96GM1 343 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 TMEM204Q9BSN7 226 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 MRPL13Q9BYD1 178 aaKnown RBP13.4□□□□□ -0.26
SDC3-203ENST00000471567 ULBP2Q9BZM5 246 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 LRMDAQ9H2I8 198 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 PLEKHF2Q9H8W4 249 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 SLC7A8Q9UHI5 535 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 SIGLEC7Q9Y286 467 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 LYVE1Q9Y5Y7 322 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 NAV2Q8IVL1 2488 aa13.4□□□□□ -0.26
SDC3-203ENST00000471567 ARPC4-TTLL3A0A0A6YYG9 625 aa13.39□□□□□ -0.27
SDC3-203ENST00000471567 DHRS12A0PJE2 317 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms