RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 GABARAPL3Q9BY60 117 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 SGK2Q9HBY8 427 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 THUMPD1Q9NXG2 353 aaKnown RBP0.7□□□□□ -2.3
COMMD3-209ENST00000471350 KLHL28Q9NXS3 571 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 CGNQ9P2M7 1197 aaKnown RBP0.7□□□□□ -2.3
COMMD3-209ENST00000471350 ENOPH1Q9UHY7 261 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 PACSIN2Q9UNF0 486 aaPredicted RBP0.7□□□□□ -2.3
COMMD3-209ENST00000471350 B9D1Q9UPM9 204 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 KDRP35968 1356 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 COL27A1Q8IZC6 1860 aaPredicted RBP0.69□□□□□ -2.3
COMMD3-209ENST00000471350 SPAG9O60271 1321 aaKnown RBP0.69□□□□□ -2.3
COMMD3-209ENST00000471350 CENPJQ9HC77 1338 aaPredicted RBP0.69□□□□□ -2.3
COMMD3-209ENST00000471350 A0A0U1RQV5 110 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 CTAGE5O15320 804 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 TAPBPO15533 448 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 BCAS2O75934 225 aaPredicted RBP0.69□□□□□ -2.3
COMMD3-209ENST00000471350 APCSP02743 223 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 FABP3P05413 133 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 CCDC130P13994 396 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 IMPDH1P20839 514 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 ADRA1AP35348 466 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 RORAP35398 523 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 MAP3K8P41279 467 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 CXCL12P48061 93 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 PSMD8P48556 350 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 CDH4P55283 916 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 MESDQ14696 234 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 OXA1LQ15070 435 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 SLC25A52Q3SY17 297 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 TP53I3Q53FA7 332 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 OR2G6Q5TZ20 316 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 RAET1GQ6H3X3 334 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 ZFP1Q6P2D0 407 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 CNIH2Q6PI25 160 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 KDM7AQ6ZMT4 941 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 CATSPER4Q7RTX7 472 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 ERASQ7Z444 233 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 GRAMD2AQ8IUY3 354 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 SLC35F2Q8IXU6 374 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 ZADH2Q8N4Q0 377 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 APCDD1LQ8NCL9 501 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 FBXL13Q8NEE6 735 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 ZNF680Q8NEM1 530 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 OR2L3Q8NG85 312 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 OR52B4Q8NGK2 314 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 LILRB4Q8NHJ6 448 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 FGF14Q92915 247 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 EFHD2Q96C19 240 aaPredicted RBP0.69□□□□□ -2.3
COMMD3-209ENST00000471350 AMDHD1Q96NU7 426 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 ATP6V0BQ99437 205 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 TBL1YQ9BQ87 522 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 TMEM59Q9BXS4 323 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 THAP9Q9H5L6 903 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 YY1AP1Q9H869 796 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 NHEJ1Q9H9Q4 299 aaPredicted RBP0.69□□□□□ -2.3
COMMD3-209ENST00000471350 SLC17A5Q9NRA2 495 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 FBXO6Q9NRD1 293 aaPredicted RBP0.69□□□□□ -2.3
COMMD3-209ENST00000471350 GIN1Q9NXP7 522 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 HOXC10Q9NYD6 342 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 MTRRQ9UBK8 725 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 FETUBQ9UGM5 382 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 SIGLEC9Q9Y336 463 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 SDK2Q58EX2 2172 aa0.69□□□□□ -2.3
COMMD3-209ENST00000471350 TUBGCP6Q96RT7 1819 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 SHROOM3Q8TF72 1996 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 LTBP4Q8N2S1 1624 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 TRAV6A0A075B6T7 132 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 ZNF98A6NK75 572 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 A8MXQ7 604 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 F5H6K3 240 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 MGRN1O60291 552 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 RHOBTB1O94844 696 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 OXSR1O95747 527 aaPredicted RBP0.68□□□□□ -2.3
COMMD3-209ENST00000471350 AP2A1O95782 977 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 HLA-DQA1P01909 254 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 CD74P04233 296 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 ETS1P14921 441 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 TCN1P20061 433 aaPredicted RBP0.68□□□□□ -2.3
COMMD3-209ENST00000471350 PCMT1P22061 227 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 SLC2A5P22732 501 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 AK4P27144 223 aaPredicted RBP0.68□□□□□ -2.3
COMMD3-209ENST00000471350 GCAP28676 217 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 CASP14P31944 242 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 SOX6P35712 828 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 DDOSTP39656 456 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 GSSP48637 474 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 CCR8P51685 355 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 NCBP2P52298 156 aaKnown RBP eCLIP0.68□□□□□ -2.3
COMMD3-209ENST00000471350 STARD6P59095 220 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 RPS14P62263 151 aaKnown RBP0.68□□□□□ -2.3
COMMD3-209ENST00000471350 RPS21P63220 83 aaKnown RBP0.68□□□□□ -2.3
COMMD3-209ENST00000471350 KLRC3Q07444 240 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 SPP2Q13103 211 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 PDK1Q15118 436 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 SLC15A2Q16348 729 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 POU2AF1Q16633 256 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 PRMT9Q6P2P2 845 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 SMARCD3Q6STE5 483 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 CASP12Q6UXS9 341 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 RBM43Q6ZSC3 357 aaKnown RBP0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms