RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 SLC17A5Q9NRA2 495 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 VAPAQ9P0L0 249 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 SLAMF8Q9P0V8 285 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 RPS6KB2Q9UBS0 482 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 CEPT1Q9Y6K0 416 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 NAV3Q8IVL0 2385 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 NF1P21359 2839 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 CCDC160A6NGH7 325 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 ELOA3DA6NLF2 546 aaPredicted RBP11.84□□□□□ -0.51
HMGN1-211ENST00000471260 FTCDNL1E5RQL4 147 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 DLGAP1O14490 977 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 FZD7O75084 574 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 SERPINB7O75635 380 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 TRMUO75648 421 aaKnown RBP11.84□□□□□ -0.51
HMGN1-211ENST00000471260 WNT11O96014 354 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 RAP2AP10114 183 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 PNMTP11086 282 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 CDH11P55287 796 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 PRPS1P60891 318 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 ELOA3BQ3SY89 546 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 FAM98BQ52LJ0 330 aaKnown RBP11.84□□□□□ -0.51
HMGN1-211ENST00000471260 NANOGP8Q6NSW7 305 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 TTC33Q6PID6 262 aaPredicted RBP11.84□□□□□ -0.51
HMGN1-211ENST00000471260 SLC22A25Q6T423 547 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 USP51Q70EK9 711 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 CREB3L2Q70SY1 520 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 SVOPLQ8N434 492 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 DHRSXQ8N5I4 330 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 ELOA3Q8NG57 546 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 NFKBIDQ8NI38 313 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 ZNF385AQ96PM9 386 aaKnown RBP11.84□□□□□ -0.51
HMGN1-211ENST00000471260 ZNF607Q96SK3 696 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 CGREF1Q99674 301 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 NANOGQ9H9S0 305 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 MOV10Q9HCE1 1003 aaKnown RBP11.84□□□□□ -0.51
HMGN1-211ENST00000471260 ADPRHL2Q9NX46 363 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 ETAA1Q9NY74 926 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 OAZ3Q9UMX2 235 aa11.84□□□□□ -0.51
HMGN1-211ENST00000471260 SAC3D1A6NKF1 404 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 KRT33AO76009 404 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 CD8AP01732 235 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 GTF2E2P29084 291 aaKnown RBP11.83□□□□□ -0.52
HMGN1-211ENST00000471260 ZNF83P51522 516 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 FOXG1P55316 489 aaPredicted RBP11.83□□□□□ -0.52
HMGN1-211ENST00000471260 EGR4Q05215 589 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 SCARB2Q14108 478 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 MFSD13AQ14CX5 517 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 CLEC12BQ2HXU8 276 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 ZBED5Q49AG3 693 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 FAM69AQ5T7M9 428 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 ZNF544Q6NX49 715 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 ULK3Q6PHR2 472 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 KLHL24Q6TFL4 600 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 DLEU7Q6UYE1 221 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 GPR141Q7Z602 305 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 WDR31Q8NA23 367 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 ANKK1Q8NFD2 765 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 OR6S1Q8NH40 331 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 SLC38A4Q969I6 547 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 NMD3Q96D46 503 aaKnown RBP11.83□□□□□ -0.52
HMGN1-211ENST00000471260 DHRS9Q9BPW9 319 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 PTDSS2Q9BVG9 487 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 LINC00470Q9BZP3 86 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 FKRPQ9H9S5 495 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 CBLN4Q9NTU7 201 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 USE1Q9NZ43 259 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 TESQ9UGI8 421 aaKnown RBP11.83□□□□□ -0.52
HMGN1-211ENST00000471260 EGFL7Q9UHF1 273 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 POU2F3Q9UKI9 436 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 B3GALT5Q9Y2C3 310 aa11.83□□□□□ -0.52
HMGN1-211ENST00000471260 LOC102725191A0A1B0GVB3 256 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 FAM220BPB1ANY3 271 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 E7EQL1 145 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 ZNF587BE7ETH6 402 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 M0R1B8 84 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 SMAD7O15105 426 aaKnown RBP11.82□□□□□ -0.52
HMGN1-211ENST00000471260 HOXB1P14653 301 aaPredicted RBP11.82□□□□□ -0.52
HMGN1-211ENST00000471260 ZNF43P17038 809 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 CDKN1AP38936 164 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 ALDH3A2P51648 485 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 RPS6KA3P51812 740 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 GABARAPL2P60520 117 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 CHRNB3Q05901 458 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 RBBP4Q09028 425 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 TNK1Q13470 666 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 GK3PQ14409 553 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 RFX4Q33E94 735 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 RUNDC3AQ59EK9 446 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 RABL3Q5HYI8 236 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 ALG10BQ5I7T1 473 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 Q71RC1 249 aaPredicted RBP11.82□□□□□ -0.52
HMGN1-211ENST00000471260 CROCCP3Q8IVE0 287 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 FBXL14Q8N1E6 418 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 MAGEE2Q8TD90 523 aaPredicted RBP11.82□□□□□ -0.52
HMGN1-211ENST00000471260 SLC47A1Q96FL8 570 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 ADAD1Q96M93 576 aaKnown RBP11.82□□□□□ -0.52
HMGN1-211ENST00000471260 HS6ST2Q96MM7 605 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 OXGR1Q96P68 337 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 DOK1Q99704 481 aa11.82□□□□□ -0.52
HMGN1-211ENST00000471260 TMEM27Q9HBJ8 222 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms