RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 IST1P53990 364 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 PPP1R8Q12972 351 aaKnown RBP13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 RPL13AP3Q6NVV1 102 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 NIPAL3Q6P499 406 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 SHQ1Q6PI26 577 aaKnown RBP13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 CD300LDQ6UXZ3 194 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 SLC35D2Q76EJ3 337 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 KIF18BQ86Y91 864 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 AQP11Q8NBQ7 271 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 OR10G2Q8NGC3 310 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 OR51A7Q8NH64 312 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 OR6X1Q8NH79 312 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 PYDC1Q8WXC3 89 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 LRR1Q96L50 414 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 TNFRSF13CQ96RJ3 184 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 BDH2Q9BUT1 245 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 OR10A4Q9H209 315 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 MED29Q9NX70 200 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 STX18Q9P2W9 335 aaKnown RBP13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 PRSS50Q9UI38 385 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 MGAT4BQ9UQ53 548 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 AKAP6Q13023 2319 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 SLC35F4A4IF30 521 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 PDLIM1O00151 329 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 ENTPD5O75356 428 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 SLC43A1O75387 559 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 NDUFB2O95178 105 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 F13BP05160 661 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 GSTM3P21266 225 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 CCKARP32238 428 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 ARHGDIAP52565 204 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 FXYD6P3P58550 94 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 KRTAP10-9P60411 292 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 LAPTM4AQ15012 233 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 ACKR1Q16570 336 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 ARMC4Q5T2S8 1044 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 TSPO2Q5TGU0 170 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 FAM205BPQ63HN1 556 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 SMARCD3Q6STE5 483 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 STAC2Q6ZMT1 411 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 ZNF620Q6ZNG0 422 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 ABHD12BQ7Z5M8 362 aaPredicted RBP13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 TMEM179BQ7Z7N9 219 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 CLDN22Q8N7P3 220 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 FANK1Q8TC84 345 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 GIPC3Q8TF64 312 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 ASB10Q8WXI3 467 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 LURAP1Q96LR2 239 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 ENKD1Q9H0I2 346 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 TXNIPQ9H3M7 391 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 SLC7A10Q9NS82 523 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 ASB6Q9NWX5 421 aa13.18□□□□□ -0.3
CDC42SE1-203ENST00000470278 ERICH4A6NGS2 130 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 MCIDASD6RGH6 385 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 SERPINI2O75830 405 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 BCL10O95999 233 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 GASTP01350 101 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 IGHV3-9P01782 118 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 CD14P08571 375 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 APEHP13798 732 aaKnown RBP13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 UGT2B10P36537 528 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 BIDP55957 195 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 COX10Q12887 443 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 ITGADQ13349 1161 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 RASSF6Q6ZTQ3 369 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 FAM122BQ7Z309 247 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 C20orf196Q8IYI0 205 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 DNAJC9Q8WXX5 260 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 CENPNQ96H22 339 aaPredicted RBP13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 SLC25A44Q96H78 314 aaPredicted RBP13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 TXNDC15Q96J42 360 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 FEVQ99581 238 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 SPOCK3Q9BQ16 436 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 USB1Q9BQ65 265 aaKnown RBP13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 HDHD5Q9BXW7 423 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 OR52D1Q9H346 318 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 SLC24A3Q9HC58 644 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 NRIP3Q9NQ35 241 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 TAS2R16Q9NYV7 291 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 PDP1Q9P0J1 537 aaPredicted RBP13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 GPR52Q9Y2T5 361 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 CDH10Q9Y6N8 788 aa13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 NIPBLQ6KC79 2804 aaeCLIP13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 ZNF469Q96JG9 3925 aaPredicted RBP13.17□□□□□ -0.3
CDC42SE1-203ENST00000470278 ACANP16112 2415 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 ZNF726A6NNF4 738 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 ZNF587BE7ETH6 402 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 C16orf97H3BN30 126 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 RPL36A-HNRNPH2H7BZ11 118 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 IGHG1P01857 330 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 PGA4P0DJD7 388 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 PGA3P0DJD8 388 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 ANXA8P13928 327 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 IGHV1-2P23083 117 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 CTXN1P60606 82 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 RPL27P61353 136 aaKnown RBP13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 FAM27E3Q08E93 113 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 MELKQ14680 651 aa13.16□□□□□ -0.3
CDC42SE1-203ENST00000470278 TESK1Q15569 626 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms