RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 USP43Q70EL4 1123 aa7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 CBLL1Q75N03 491 aa7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 PEG10Q86TG7 708 aaKnown RBP7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 SERPINA11Q86U17 422 aa7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 ZBTB46Q86UZ6 589 aa7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 CENPSQ8N2Z9 138 aa7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 TEX29Q8N6K0 151 aa7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 TMCO5AQ8N6Q1 288 aa7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 LRRC17Q8N6Y2 441 aa7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 TOR1AIP2Q8NFQ8 470 aa7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 CNIH3Q8TBE1 160 aa7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 FBLIM1Q8WUP2 373 aa7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 RORBQ92753 470 aa7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 FBXO17Q96EF6 278 aa7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 PANX1Q96RD7 426 aa7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 BBS4Q96RK4 519 aa7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 VRK1Q99986 396 aaPredicted RBP7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 BCL7BQ9BQE9 202 aa7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 FUNDC2Q9BWH2 189 aa7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 SPATA9Q9BWV2 254 aa7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 RTN4RQ9BZR6 473 aa7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 TMEM185BQ9H7F4 350 aa7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 METTL17Q9H7H0 456 aaPredicted RBP7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 BCO1Q9HAY6 547 aa7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 MED17Q9NVC6 651 aa7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 PDP1Q9P0J1 537 aaPredicted RBP7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 NTMQ9P121 344 aa7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 SAMHD1Q9Y3Z3 626 aaKnown RBP7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 U3KQV3 271 aa7.81□□□□□ -1.16
SYNGAP1-205ENST00000470232 A0A087WV62 115 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 NPIPA5A0A0B4J1W7 369 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 NPIPA7E9PJI5 369 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 SCAMP2O15127 329 aaKnown RBP7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 RGS10O43665 173 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 XPNPEP2O43895 674 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 BCAS1O75363 584 aaPredicted RBP7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 NME6O75414 186 aaPredicted RBP7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 INMTO95050 263 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 DIRAS1O95057 198 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 SEMG1P04279 462 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 ERCC1P07992 297 aaPredicted RBP7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 NPIPA8P0DM63 369 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 HSD3B1P14060 373 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 HPGDP15428 266 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 NR4A1P22736 598 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 IGHV1-2P23083 117 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 HSD3B2P26439 372 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 APEX1P27695 318 aaKnown RBP7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 PCGF2P35227 344 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 DVL1P1P54792 670 aaPredicted RBP7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 CHRNEQ04844 493 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 RASGEF1BQ0VAM2 473 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 AQP6Q13520 282 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 MLC1Q15049 377 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 SWI5Q1ZZU3 235 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 PLPPR5Q32ZL2 321 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 C1QTNF12Q5T7M4 302 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 SLC16A12Q6ZSM3 486 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 ZNF551Q7Z340 670 aaPredicted RBP7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 ADCK1Q86TW2 530 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 PTOV1Q86YD1 416 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 MISPQ8IVT2 679 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 CLECL1Q8IZS7 167 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 UBE2J2Q8N2K1 259 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 ZNF433Q8N7K0 673 aaPredicted RBP7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 ATG16L2Q8NAA4 619 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 OR7G2Q8NG99 324 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 OR52N5Q8NH56 324 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 RNF217Q8TC41 542 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 SLC9A6Q92581 669 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 EXOSC8Q96B26 276 aaKnown RBP7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 EGLN2Q96KS0 407 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 DUSP26Q9BV47 211 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 ZNF747Q9BV97 191 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 WDR12Q9GZL7 423 aaKnown RBP7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 BPESC1Q9GZL8 116 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 SAP130Q9H0E3 1048 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 RAB1BQ9H0U4 201 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 REEP1Q9H902 201 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 BRF2Q9HAW0 419 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 CCNB1IP1Q9NPC3 277 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 IL1RAPQ9NPH3 570 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 KRT84Q9NSB2 600 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 PAK1IP1Q9NWT1 392 aaPredicted RBP7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 ADPRHL2Q9NX46 363 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 FLRT3Q9NZU0 649 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 VPS29Q9UBQ0 182 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 PRSS50Q9UI38 385 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 CORO2BQ9UQ03 480 aa7.8□□□□□ -1.16
SYNGAP1-205ENST00000470232 ZNF724A8MTY0 619 aa7.79□□□□□ -1.16
SYNGAP1-205ENST00000470232 B4DSR2 109 aa7.79□□□□□ -1.16
SYNGAP1-205ENST00000470232 ALG1L2C9J202 215 aa7.79□□□□□ -1.16
SYNGAP1-205ENST00000470232 M0R3G1 203 aa7.79□□□□□ -1.16
SYNGAP1-205ENST00000470232 KPNA4O00629 521 aaPredicted RBP7.79□□□□□ -1.16
SYNGAP1-205ENST00000470232 SLC22A1O15245 554 aa7.79□□□□□ -1.16
SYNGAP1-205ENST00000470232 TMPRSS2O15393 492 aa7.79□□□□□ -1.16
SYNGAP1-205ENST00000470232 MRPS14O60783 128 aaKnown RBP7.79□□□□□ -1.16
SYNGAP1-205ENST00000470232 GABARAPO95166 117 aa7.79□□□□□ -1.16
SYNGAP1-205ENST00000470232 ANXA4P09525 319 aaPredicted RBP7.79□□□□□ -1.16
SYNGAP1-205ENST00000470232 TACSTD2P09758 323 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms