RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 NR2C1P13056 603 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 ETS2P15036 469 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 PVRP15151 417 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 NCK1P16333 377 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 TSPAN8P19075 237 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 HNRNPH3P31942 346 aaKnown RBP3.31□□□□□ -1.88
COL11A1-208ENST00000470170 P2RY2P41231 377 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 ACADSBP45954 432 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 CBX5P45973 191 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 NPBWR2P48146 333 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 RFX3P48380 749 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 PSMD7P51665 324 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 PLA2G16P53816 162 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 EMP2P54851 167 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 CLDN18P56856 261 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 PLP1P60201 277 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 RAD51Q06609 339 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 ITIH4Q14624 930 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 CYTH1Q15438 398 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 ZNF528Q3MIS6 628 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 LINC01620Q4KN68 170 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 XKR4Q5GH76 650 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 MS4A13Q5J8X5 152 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 CDKL4Q5MAI5 379 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 MFSD14CQ5VZR4 134 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 RTL6Q6ICC9 239 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 NCCRP1Q6ZVX7 275 aaPredicted RBP3.31□□□□□ -1.88
COL11A1-208ENST00000470170 ARCQ7LC44 396 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 PRSS48Q7RTY5 328 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 PID1Q7Z2X4 250 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 ABHD12BQ7Z5M8 362 aaPredicted RBP3.31□□□□□ -1.88
COL11A1-208ENST00000470170 ACOT1Q86TX2 421 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 PARGQ86W56 976 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 GPBP1Q86WP2 473 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 TGIF2LYQ8IUE0 185 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 MFSD6LQ8IWD5 586 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 ARHGAP18Q8N392 663 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 SNX31Q8N9S9 440 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 FBXO36Q8NEA4 188 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 NFAM1Q8NET5 270 aaPredicted RBP3.31□□□□□ -1.88
COL11A1-208ENST00000470170 OR4D5Q8NGN0 318 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 PIH1D2Q8WWB5 315 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 HTR3CQ8WXA8 447 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 GTF2H4Q92759 462 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 C10orf35Q96D05 121 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 IL4I1Q96RQ9 567 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 CTRCQ99895 268 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 TSGA10Q9BZW7 698 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 DERL2Q9GZP9 239 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 LRRN3Q9H3W5 708 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 POLE4Q9NR33 117 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 C1orf123Q9NWV4 160 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 GNG12Q9UBI6 72 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 PHF11Q9UIL8 331 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 NAGKQ9UJ70 344 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 ZNF229Q9UJW7 825 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 GSTK1Q9Y2Q3 226 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 STARD10Q9Y365 291 aa3.31□□□□□ -1.88
COL11A1-208ENST00000470170 SAMHD1Q9Y3Z3 626 aaKnown RBP3.31□□□□□ -1.88
COL11A1-208ENST00000470170 NEURL4Q96JN8 1562 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 MEGF6O75095 1541 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 ARID1AO14497 2285 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 MAP3K15Q6ZN16 1313 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 KBTBD11-OT1A0A1B0GTJ5 212 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 A0A1W2PNV4 684 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 LRRC30A6NM36 301 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 GPR171O14626 319 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 LATO43561 262 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 NSA2O95478 260 aaKnown RBP3.3□□□□□ -1.88
COL11A1-208ENST00000470170 SERPINA6P08185 405 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 GSTT2P0CG29 244 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 GSTT2BP0CG30 244 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 UBCP0CG48 685 aaKnown RBP3.3□□□□□ -1.88
COL11A1-208ENST00000470170 MLNP12872 115 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 ATP1B2P14415 290 aaPredicted RBP3.3□□□□□ -1.88
COL11A1-208ENST00000470170 CD82P27701 267 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 CDKN2CP42773 168 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 XCR1P46094 333 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 NPY2RP49146 381 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 CASP4P49662 377 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 ATP1B3P54709 279 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 RIPPLY3P57055 190 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 MAGOHP61326 146 aaKnown RBP3.3□□□□□ -1.88
COL11A1-208ENST00000470170 SERTAD2Q14140 314 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 ACSF3Q4G176 576 aaPredicted RBP3.3□□□□□ -1.88
COL11A1-208ENST00000470170 SFT2D3Q587I9 215 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 OR52W1Q6IF63 320 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 Q6P435 159 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 MRPL21Q7Z2W9 205 aaKnown RBP3.3□□□□□ -1.88
COL11A1-208ENST00000470170 PAGE2Q7Z2X7 111 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 ERI1Q8IV48 349 aaKnown RBP3.3□□□□□ -1.88
COL11A1-208ENST00000470170 MMAAQ8IVH4 418 aaKnown RBP3.3□□□□□ -1.88
COL11A1-208ENST00000470170 SLC38A6Q8IZM9 456 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 MFSD9Q8NBP5 474 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 NECAP1Q8NC96 275 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 TTLQ8NG68 377 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 OR4L1Q8NH43 312 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 FAM3CQ92520 227 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 SLC25A36Q96CQ1 311 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 OTUB2Q96DC9 234 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms