RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 LRRN3E7EW58 273 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 VAMP5O95183 116 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 ADAP00813 363 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 GASTP01350 101 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 FCGR2AP12318 317 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 MAKP20794 623 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 FPR3P25089 353 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 GRPRP30550 384 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 GPR4P46093 362 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 COX10Q12887 443 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 TSPAN31Q12999 210 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 ITGADQ13349 1161 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 H1FNTQ75WM6 255 aaPredicted RBP13.18□□□□□ -0.3
DDX56-208ENST00000467318 OAFQ86UD1 273 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 DOLPP1Q86YN1 238 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 CCDC71Q8IV32 467 aaPredicted RBP13.18□□□□□ -0.3
DDX56-208ENST00000467318 CENPSQ8N2Z9 138 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 AQP11Q8NBQ7 271 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 ADPRHL1Q8NDY3 354 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 DYNC2LI1Q8TCX1 351 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 PRRG4Q9BZD6 226 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 AKIP1Q9NQ31 210 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 CNOT2Q9NZN8 540 aaKnown RBP13.18□□□□□ -0.3
DDX56-208ENST00000467318 NBASA2RRP1 2371 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 FAM208BQ5VWN6 2430 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 SLC22A20A6NK97 555 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 M0R082 166 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 KLF4O43474 513 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 AKR7A3O95154 331 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 HNRNPCP07910 306 aaKnown RBP eCLIP13.18□□□□□ -0.3
DDX56-208ENST00000467318 GSTM3P21266 225 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 CBLP22681 906 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 EPHA2P29317 976 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 OPRL1P41146 370 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 GSSP48637 474 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 SMN1Q16637 294 aaKnown RBP13.18□□□□□ -0.3
DDX56-208ENST00000467318 ACSF3Q4G176 576 aaPredicted RBP13.18□□□□□ -0.3
DDX56-208ENST00000467318 NSUN5P2Q63ZY6 315 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 TMEM225Q6GV28 225 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 IGFN1Q86VF2 1251 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 ATCAYQ86WG3 371 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 STX19Q8N4C7 294 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 LRRC17Q8N6Y2 441 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 OR6Q1Q8NGQ2 317 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 ZNF417Q8TAU3 575 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 GGHQ92820 318 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 WNT2BQ93097 391 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 Q96MT0 163 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 ZNF587Q96SQ5 575 aaPredicted RBP13.18□□□□□ -0.3
DDX56-208ENST00000467318 RACGAP1Q9H0H5 632 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 MMP27Q9H306 513 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 CHST11Q9NPF2 352 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 CLN6Q9NWW5 311 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 RHBDL2Q9NX52 303 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 CLCF1Q9UBD9 225 aa13.18□□□□□ -0.3
DDX56-208ENST00000467318 AQP7P3A6NL99 342 aa13.17□□□□□ -0.3
DDX56-208ENST00000467318 CDC42EP2O14613 210 aa13.17□□□□□ -0.3
DDX56-208ENST00000467318 OR6A2O95222 327 aa13.17□□□□□ -0.3
DDX56-208ENST00000467318 TSPAN19P0C672 248 aa13.17□□□□□ -0.3
DDX56-208ENST00000467318 PRPS1P60891 318 aa13.17□□□□□ -0.3
DDX56-208ENST00000467318 RNPS1Q15287 305 aaKnown RBP13.17□□□□□ -0.3
DDX56-208ENST00000467318 C1orf185Q5T7R7 199 aa13.17□□□□□ -0.3
DDX56-208ENST00000467318 CD300LDQ6UXZ3 194 aa13.17□□□□□ -0.3
DDX56-208ENST00000467318 USP43Q70EL4 1123 aa13.17□□□□□ -0.3
DDX56-208ENST00000467318 FCRLAQ7L513 359 aa13.17□□□□□ -0.3
DDX56-208ENST00000467318 NANOGNBQ7Z5D8 188 aa13.17□□□□□ -0.3
DDX56-208ENST00000467318 TMEM99Q8N816 258 aa13.17□□□□□ -0.3
DDX56-208ENST00000467318 FNDC9Q8TBE3 224 aa13.17□□□□□ -0.3
DDX56-208ENST00000467318 TRIB1Q96RU8 372 aa13.17□□□□□ -0.3
DDX56-208ENST00000467318 TM9SF2Q99805 663 aa13.17□□□□□ -0.3
DDX56-208ENST00000467318 SF3B5Q9BWJ5 86 aaKnown RBP13.17□□□□□ -0.3
DDX56-208ENST00000467318 FANCFQ9NPI8 374 aa13.17□□□□□ -0.3
DDX56-208ENST00000467318 RASD1Q9Y272 281 aa13.17□□□□□ -0.3
DDX56-208ENST00000467318 HIF3AQ9Y2N7 669 aa13.17□□□□□ -0.3
DDX56-208ENST00000467318 RELNP78509 3460 aa13.17□□□□□ -0.3
DDX56-208ENST00000467318 POLEQ07864 2286 aa13.17□□□□□ -0.3
DDX56-208ENST00000467318 RP1L1Q8IWN7 2480 aaPredicted RBP13.16□□□□□ -0.3
DDX56-208ENST00000467318 LOC102725191A0A1B0GVB3 256 aa13.16□□□□□ -0.3
DDX56-208ENST00000467318 BLOC1S5-TXNDC5H3BN57 136 aa13.16□□□□□ -0.3
DDX56-208ENST00000467318 PLPP3O14495 311 aa13.16□□□□□ -0.3
DDX56-208ENST00000467318 SMAD9O15198 467 aaKnown RBP13.16□□□□□ -0.3
DDX56-208ENST00000467318 CYTIPO60759 359 aa13.16□□□□□ -0.3
DDX56-208ENST00000467318 STSP08842 583 aa13.16□□□□□ -0.3
DDX56-208ENST00000467318 POU2F1P14859 743 aa13.16□□□□□ -0.3
DDX56-208ENST00000467318 GABRB1P18505 474 aa13.16□□□□□ -0.3
DDX56-208ENST00000467318 NR4A1P22736 598 aa13.16□□□□□ -0.3
DDX56-208ENST00000467318 CRISP1P54107 249 aa13.16□□□□□ -0.3
DDX56-208ENST00000467318 RPS4XP62701 263 aaKnown RBP13.16□□□□□ -0.3
DDX56-208ENST00000467318 PUDPQ08623 228 aa13.16□□□□□ -0.3
DDX56-208ENST00000467318 ZP4Q12836 540 aa13.16□□□□□ -0.3
DDX56-208ENST00000467318 TIGD6Q17RP2 521 aa13.16□□□□□ -0.3
DDX56-208ENST00000467318 P4HA3Q7Z4N8 544 aa13.16□□□□□ -0.3
DDX56-208ENST00000467318 KBTBD8Q8NFY9 601 aa13.16□□□□□ -0.3
DDX56-208ENST00000467318 RNF128Q8TEB7 428 aa13.16□□□□□ -0.3
DDX56-208ENST00000467318 ROBO4Q8WZ75 1007 aa13.16□□□□□ -0.3
DDX56-208ENST00000467318 GPA33Q99795 319 aa13.16□□□□□ -0.3
DDX56-208ENST00000467318 GP6Q9HCN6 339 aa13.16□□□□□ -0.3
DDX56-208ENST00000467318 GLRX2Q9NS18 164 aa13.16□□□□□ -0.3
DDX56-208ENST00000467318 KLHL9Q9P2J3 617 aa13.16□□□□□ -0.3
DDX56-208ENST00000467318 AASSQ9UDR5 926 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms