RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 LIMS1P48059 325 aa13.8□□□□□ -0.2
TSSC4-208ENST00000467308 DGCR6Q14129 220 aa13.8□□□□□ -0.2
TSSC4-208ENST00000467308 OGFRL1Q5TC84 451 aaPredicted RBP13.8□□□□□ -0.2
TSSC4-208ENST00000467308 ZNF544Q6NX49 715 aa13.8□□□□□ -0.2
TSSC4-208ENST00000467308 C3orf33Q6P1S2 294 aa13.8□□□□□ -0.2
TSSC4-208ENST00000467308 ZNF613Q6PF04 617 aa13.8□□□□□ -0.2
TSSC4-208ENST00000467308 AMIGO2Q86SJ2 522 aa13.8□□□□□ -0.2
TSSC4-208ENST00000467308 ZNF100Q8IYN0 542 aa13.8□□□□□ -0.2
TSSC4-208ENST00000467308 OR5W2Q8NH69 310 aa13.8□□□□□ -0.2
TSSC4-208ENST00000467308 C10orf105Q8TEF2 133 aa13.8□□□□□ -0.2
TSSC4-208ENST00000467308 NMNAT1Q9HAN9 279 aaPredicted RBP13.8□□□□□ -0.2
TSSC4-208ENST00000467308 ACER3Q9NUN7 267 aa13.8□□□□□ -0.2
TSSC4-208ENST00000467308 IGKV3D-15A0A087WSY6 115 aa13.79□□□□□ -0.2
TSSC4-208ENST00000467308 GNGT2O14610 69 aa13.79□□□□□ -0.2
TSSC4-208ENST00000467308 FRS3O43559 492 aa13.79□□□□□ -0.2
TSSC4-208ENST00000467308 LMX1BO60663 402 aa13.79□□□□□ -0.2
TSSC4-208ENST00000467308 UBTFL6P0CB48 400 aaPredicted RBP13.79□□□□□ -0.2
TSSC4-208ENST00000467308 BMP4P12644 408 aa13.79□□□□□ -0.2
TSSC4-208ENST00000467308 PRG2P13727 222 aa13.79□□□□□ -0.2
TSSC4-208ENST00000467308 UQCRBP14927 111 aa13.79□□□□□ -0.2
TSSC4-208ENST00000467308 SRD5A1P18405 259 aa13.79□□□□□ -0.2
TSSC4-208ENST00000467308 USF1P22415 310 aaPredicted RBP13.79□□□□□ -0.2
TSSC4-208ENST00000467308 CBFBQ13951 182 aa13.79□□□□□ -0.2
TSSC4-208ENST00000467308 PDK3Q15120 406 aa13.79□□□□□ -0.2
TSSC4-208ENST00000467308 QPRTQ15274 297 aa13.79□□□□□ -0.2
TSSC4-208ENST00000467308 SWT1Q5T5J6 900 aaKnown RBP13.79□□□□□ -0.2
TSSC4-208ENST00000467308 FBXW9Q5XUX1 488 aa13.79□□□□□ -0.2
TSSC4-208ENST00000467308 SHQ1Q6PI26 577 aaKnown RBP13.79□□□□□ -0.2
TSSC4-208ENST00000467308 DEF8Q6ZN54 512 aa13.79□□□□□ -0.2
TSSC4-208ENST00000467308 DEPDC4Q8N2C3 294 aa13.79□□□□□ -0.2
TSSC4-208ENST00000467308 OR4C15Q8NGM1 316 aa13.79□□□□□ -0.2
TSSC4-208ENST00000467308 ZNF775Q96BV0 537 aaPredicted RBP13.79□□□□□ -0.2
TSSC4-208ENST00000467308 ZNF524Q96C55 264 aa13.79□□□□□ -0.2
TSSC4-208ENST00000467308 MCHR1Q99705 422 aa13.79□□□□□ -0.2
TSSC4-208ENST00000467308 FUZQ9BT04 418 aa13.79□□□□□ -0.2
TSSC4-208ENST00000467308 REEP1Q9H902 201 aa13.79□□□□□ -0.2
TSSC4-208ENST00000467308 EMC3Q9P0I2 261 aa13.79□□□□□ -0.2
TSSC4-208ENST00000467308 LYVE1Q9Y5Y7 322 aa13.79□□□□□ -0.2
TSSC4-208ENST00000467308 SLC25A15Q9Y619 301 aa13.79□□□□□ -0.2
TSSC4-208ENST00000467308 ARFGEF3Q5TH69 2177 aa13.79□□□□□ -0.2
TSSC4-208ENST00000467308 TRAPPC13A5PLN9 417 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 ARRDC5A6NEK1 342 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 J3KTA2 159 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 HAX1O00165 279 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 RAD51DO75771 328 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 H1F0P07305 194 aaKnown RBP13.78□□□□□ -0.2
TSSC4-208ENST00000467308 GKN3PP0CG01 181 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 ZNF16P17020 682 aaPredicted RBP13.78□□□□□ -0.2
TSSC4-208ENST00000467308 HTR2AP28223 471 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 RRM2P31350 389 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 GZMKP49863 264 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 DIO1P49895 249 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 FABP6P51161 128 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 EFNA4P52798 201 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 CSNK2A1P68400 391 aaPredicted RBP13.78□□□□□ -0.2
TSSC4-208ENST00000467308 LSM11P83369 360 aaKnown RBP eCLIP13.78□□□□□ -0.2
TSSC4-208ENST00000467308 SPOCK1Q08629 439 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 ST3GAL3Q11203 375 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 TRIP10Q15642 601 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 NDUFAF6Q330K2 333 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 ENTPD8Q5MY95 495 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 ABLIM2Q6H8Q1 611 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 B3GLCTQ6Y288 498 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 TSPYL5Q86VY4 417 aaPredicted RBP13.78□□□□□ -0.2
TSSC4-208ENST00000467308 ZDHHC13Q8IUH4 622 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 PACRGLQ8N7B6 248 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 OR52N5Q8NH56 324 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 OR5K1Q8NHB7 308 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 ADAMTS16Q8TE57 1224 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 HTRA1Q92743 480 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 OR5B2Q96R09 309 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 C9orf16Q9BUW7 83 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 FNDC11Q9BVV2 318 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 VCX3BQ9H321 246 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 TMEM27Q9HBJ8 222 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 VNN3Q9NY84 501 aa13.78□□□□□ -0.2
TSSC4-208ENST00000467308 SAMHD1Q9Y3Z3 626 aaKnown RBP13.78□□□□□ -0.2
TSSC4-208ENST00000467308 CIB4A0PJX0 185 aa13.77□□□□□ -0.21
TSSC4-208ENST00000467308 TNFRSF11BO00300 401 aa13.77□□□□□ -0.21
TSSC4-208ENST00000467308 DIRAS1O95057 198 aa13.77□□□□□ -0.21
TSSC4-208ENST00000467308 GADD45GO95257 159 aa13.77□□□□□ -0.21
TSSC4-208ENST00000467308 LYPD3O95274 346 aa13.77□□□□□ -0.21
TSSC4-208ENST00000467308 PGCP20142 388 aa13.77□□□□□ -0.21
TSSC4-208ENST00000467308 PTDSS1P48651 473 aaKnown RBP13.77□□□□□ -0.21
TSSC4-208ENST00000467308 RNF144AP50876 292 aaPredicted RBP13.77□□□□□ -0.21
TSSC4-208ENST00000467308 ZNF83P51522 516 aa13.77□□□□□ -0.21
TSSC4-208ENST00000467308 ARHGDIAP52565 204 aa13.77□□□□□ -0.21
TSSC4-208ENST00000467308 TAS2R41P59536 307 aa13.77□□□□□ -0.21
TSSC4-208ENST00000467308 SPIBQ01892 262 aa13.77□□□□□ -0.21
TSSC4-208ENST00000467308 PIN1Q13526 163 aaPredicted RBP13.77□□□□□ -0.21
TSSC4-208ENST00000467308 OR1Q1Q15612 314 aa13.77□□□□□ -0.21
TSSC4-208ENST00000467308 WBP2NLQ6ICG8 309 aa13.77□□□□□ -0.21
TSSC4-208ENST00000467308 OR7E24Q6IFN5 339 aa13.77□□□□□ -0.21
TSSC4-208ENST00000467308 TMPPEQ6ZT21 453 aa13.77□□□□□ -0.21
TSSC4-208ENST00000467308 UBE2J2Q8N2K1 259 aa13.77□□□□□ -0.21
TSSC4-208ENST00000467308 LINC00471Q8N535 108 aa13.77□□□□□ -0.21
TSSC4-208ENST00000467308 TMCO5AQ8N6Q1 288 aa13.77□□□□□ -0.21
TSSC4-208ENST00000467308 SLC25A43Q8WUT9 341 aaPredicted RBP13.77□□□□□ -0.21
TSSC4-208ENST00000467308 DNAJA4Q8WW22 397 aaPredicted RBP13.77□□□□□ -0.21
TSSC4-208ENST00000467308 NRG4Q8WWG1 115 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms