RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 FUZQ9BT04 418 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 INPP5KQ9BT40 448 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 NAT9Q9BTE0 207 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 DSN1Q9H410 356 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 RIBC2Q9H4K1 309 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 FKRPQ9H9S5 495 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 MYNNQ9NPC7 610 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 TIGARQ9NQ88 270 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.72□□□□□ -1.65
PTCD3-207ENST00000467273 CENPMQ9NSP4 180 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 SERTAD4Q9NUC0 356 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 EMC3Q9P0I2 261 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 KLHL13Q9P2N7 655 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 BAIAP2L1Q9UHR4 511 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 ATPIF1Q9UII2 106 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 IKZF3Q9UKT9 509 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 PTGDR2Q9Y5Y4 395 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 KMT2CQ8NEZ4 4911 aaKnown RBP4.72□□□□□ -1.65
PTCD3-207ENST00000467273 SERTM2A0A1B0GWG4 89 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 GLOD5A6NK44 160 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 LINC00473A8K010 186 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 B4DXG7 233 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 H0YIZ8 118 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 FOXE1O00358 373 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-207ENST00000467273 TMPRSS11DO60235 418 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 GUCY1B2O75343 617 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 REM1O75628 298 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 STK16O75716 305 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 PTBP3O95758 552 aaKnown RBP4.71□□□□□ -1.66
PTCD3-207ENST00000467273 ADAP00813 363 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 MBPP02686 304 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-207ENST00000467273 YES1P07947 543 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 CT62P0C5K7 136 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 CT45A8P0DMV1 189 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 CT45A9P0DMV2 189 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 NDUFB7P17568 137 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 GGT1P19440 569 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 COX5AP20674 150 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 ME2P23368 584 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 EVI2BP34910 448 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 PGM1P36871 562 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 EMDP50402 254 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 XKP51811 444 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 ARHGDIBP52566 201 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 ARPC4P59998 168 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 SNRPD2P62316 118 aaKnown RBP4.71□□□□□ -1.66
PTCD3-207ENST00000467273 RAE1P78406 368 aaKnown RBP4.71□□□□□ -1.66
PTCD3-207ENST00000467273 TXNL4AP83876 142 aaKnown RBP4.71□□□□□ -1.66
PTCD3-207ENST00000467273 IRF3Q14653 427 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 NNATQ16517 81 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 CT45A2Q5DJT8 189 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 ARL13AQ5H913 290 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-207ENST00000467273 PLAC9Q5JTB6 97 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 SPATA46Q5T0L3 261 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 OR5M10Q6IEU7 315 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 SULT1C3Q6IMI6 304 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 MFSD12Q6NUT3 480 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 ERICH5Q6P6B1 374 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 GSTA5Q7RTV2 222 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 LRRC70Q7Z2Q7 622 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 GALNT10Q86SR1 603 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 PRUNE1Q86TP1 453 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 NUDT13Q86X67 352 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 VSTM4Q8IW00 320 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 SLC43A2Q8N370 569 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 OR2V1Q8NHB1 315 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 FAM110BQ8TC76 370 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 DOK4Q8TEW6 326 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 MAIP1Q8WWC4 291 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 C1orf54Q8WWF1 131 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 CORO2AQ92828 525 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 CPNE4Q96A23 557 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-207ENST00000467273 EFHD2Q96C19 240 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-207ENST00000467273 COQ7Q99807 217 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 ZNF717Q9BY31 904 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-207ENST00000467273 BPESC1Q9GZL8 116 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 NTN4Q9HB63 628 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 FOLH1BQ9HBA9 442 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 POPDC3Q9HBV1 291 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 GIMAP4Q9NUV9 329 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 FAM120CQ9NX05 1096 aaKnown RBP4.71□□□□□ -1.66
PTCD3-207ENST00000467273 CTNNAL1Q9UBT7 734 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 BCAP29Q9UHQ4 241 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 GRIP1Q9Y3R0 1128 aa4.71□□□□□ -1.66
PTCD3-207ENST00000467273 ARFGEF3Q5TH69 2177 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 TCRBV7S3A2A0A539 114 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 C1orf226A1L170 272 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 SAP18O00422 153 aaKnown RBP4.7□□□□□ -1.66
PTCD3-207ENST00000467273 CXCL13O43927 109 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 FADS1O60427 444 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 UGDHO60701 494 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 PRKRAO75569 313 aaKnown RBP4.7□□□□□ -1.66
PTCD3-207ENST00000467273 PDE5AO76074 875 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 SEMA3DO95025 777 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 AKR7A3O95154 331 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 ERCC1P07992 297 aaPredicted RBP4.7□□□□□ -1.66
PTCD3-207ENST00000467273 F7P08709 466 aaPredicted RBP4.7□□□□□ -1.66
PTCD3-207ENST00000467273 DDX5P17844 614 aaKnown RBP4.7□□□□□ -1.66
PTCD3-207ENST00000467273 PGAM1P18669 254 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 EPORP19235 508 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms