RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 TCF7L2Q9NQB0 619 aa17.72■□□□□ 0.43
COL6A1-203ENST00000466285 NKIRAS1Q9NYS0 192 aa17.72■□□□□ 0.43
COL6A1-203ENST00000466285 TESQ9UGI8 421 aaKnown RBP17.72■□□□□ 0.43
COL6A1-203ENST00000466285 PRDM4Q9UKN5 801 aa17.72■□□□□ 0.43
COL6A1-203ENST00000466285 OR2T1O43869 369 aa17.71■□□□□ 0.43
COL6A1-203ENST00000466285 IFNGR1P15260 489 aa17.71■□□□□ 0.43
COL6A1-203ENST00000466285 GIPRP48546 466 aa17.71■□□□□ 0.43
COL6A1-203ENST00000466285 PTDSS1P48651 473 aaKnown RBP17.71■□□□□ 0.43
COL6A1-203ENST00000466285 CHN2P52757 468 aa17.71■□□□□ 0.43
COL6A1-203ENST00000466285 GSG1Q2KHT4 349 aa17.71■□□□□ 0.43
COL6A1-203ENST00000466285 REEP3Q6NUK4 255 aa17.71■□□□□ 0.43
COL6A1-203ENST00000466285 ULK3Q6PHR2 472 aa17.71■□□□□ 0.43
COL6A1-203ENST00000466285 PTOV1Q86YD1 416 aa17.71■□□□□ 0.43
COL6A1-203ENST00000466285 RBM45Q8IUH3 476 aaKnown RBP17.71■□□□□ 0.43
COL6A1-203ENST00000466285 SMYD1Q8NB12 490 aa17.71■□□□□ 0.43
COL6A1-203ENST00000466285 GPR32P1Q8NGA4 272 aa17.71■□□□□ 0.43
COL6A1-203ENST00000466285 DNAJA4Q8WW22 397 aaPredicted RBP17.71■□□□□ 0.43
COL6A1-203ENST00000466285 NEU4Q8WWR8 484 aaPredicted RBP17.71■□□□□ 0.43
COL6A1-203ENST00000466285 YIPF5Q969M3 257 aa17.71■□□□□ 0.43
COL6A1-203ENST00000466285 ANKRD27Q96NW4 1050 aa17.71■□□□□ 0.43
COL6A1-203ENST00000466285 RAD21L1Q9H4I0 556 aa17.71■□□□□ 0.43
COL6A1-203ENST00000466285 FAM157AC9JC47 383 aa17.7■□□□□ 0.42
COL6A1-203ENST00000466285 PLPP3O14495 311 aa17.7■□□□□ 0.42
COL6A1-203ENST00000466285 HNF1AP20823 631 aa17.7■□□□□ 0.42
COL6A1-203ENST00000466285 PUDPQ08623 228 aa17.7■□□□□ 0.42
COL6A1-203ENST00000466285 PMS2P3Q13401 168 aa17.7■□□□□ 0.42
COL6A1-203ENST00000466285 FAM91A1Q658Y4 838 aa17.7■□□□□ 0.42
COL6A1-203ENST00000466285 ZNF627Q7L945 461 aa17.7■□□□□ 0.42
COL6A1-203ENST00000466285 PAQR4Q8N4S7 273 aaPredicted RBP17.7■□□□□ 0.42
COL6A1-203ENST00000466285 SLC47A1Q96FL8 570 aa17.7■□□□□ 0.42
COL6A1-203ENST00000466285 ULBP2Q9BZM5 246 aa17.7■□□□□ 0.42
COL6A1-203ENST00000466285 MRPL39Q9NYK5 338 aaKnown RBP17.7■□□□□ 0.42
COL6A1-203ENST00000466285 C11orf98E9PRG8 122 aa17.69■□□□□ 0.42
COL6A1-203ENST00000466285 PAX7P23759 505 aa17.69■□□□□ 0.42
COL6A1-203ENST00000466285 COL8A2P25067 703 aa17.69■□□□□ 0.42
COL6A1-203ENST00000466285 NCALDP61601 193 aa17.69■□□□□ 0.42
COL6A1-203ENST00000466285 MELKQ14680 651 aa17.69■□□□□ 0.42
COL6A1-203ENST00000466285 RAB39AQ14964 217 aa17.69■□□□□ 0.42
COL6A1-203ENST00000466285 FXNQ16595 210 aa17.69■□□□□ 0.42
COL6A1-203ENST00000466285 ALKBH6Q3KRA9 238 aa17.69■□□□□ 0.42
COL6A1-203ENST00000466285 C5orf46Q6UWT4 87 aa17.69■□□□□ 0.42
COL6A1-203ENST00000466285 DLEU7Q6UYE1 221 aa17.69■□□□□ 0.42
COL6A1-203ENST00000466285 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.69■□□□□ 0.42
COL6A1-203ENST00000466285 SCAIQ8N9R8 606 aa17.69■□□□□ 0.42
COL6A1-203ENST00000466285 LINC01356Q8N9X3 169 aa17.69■□□□□ 0.42
COL6A1-203ENST00000466285 CLDND2Q8NHS1 167 aa17.69■□□□□ 0.42
COL6A1-203ENST00000466285 TSPAN32Q96QS1 320 aa17.69■□□□□ 0.42
COL6A1-203ENST00000466285 ARHGDIGQ99819 225 aa17.69■□□□□ 0.42
COL6A1-203ENST00000466285 FOXB1Q99853 325 aa17.69■□□□□ 0.42
COL6A1-203ENST00000466285 LPAR2Q9HBW0 351 aa17.69■□□□□ 0.42
COL6A1-203ENST00000466285 TMEFF2Q9UIK5 374 aaPredicted RBP17.69■□□□□ 0.42
COL6A1-203ENST00000466285 CMAHPQ9Y471 501 aa17.69■□□□□ 0.42
COL6A1-203ENST00000466285 POLR3GO15318 223 aaPredicted RBP17.68■□□□□ 0.42
COL6A1-203ENST00000466285 AKAP8O43823 692 aaKnown RBP17.68■□□□□ 0.42
COL6A1-203ENST00000466285 MFN2O95140 757 aa17.68■□□□□ 0.42
COL6A1-203ENST00000466285 GPX2P18283 190 aa17.68■□□□□ 0.42
COL6A1-203ENST00000466285 BIDP55957 195 aa17.68■□□□□ 0.42
COL6A1-203ENST00000466285 PCBP3P57721 371 aaKnown RBP17.68■□□□□ 0.42
COL6A1-203ENST00000466285 STX1BP61266 288 aa17.68■□□□□ 0.42
COL6A1-203ENST00000466285 ERVS71-1P61550 626 aa17.68■□□□□ 0.42
COL6A1-203ENST00000466285 HNRNPA0Q13151 305 aaKnown RBP17.68■□□□□ 0.42
COL6A1-203ENST00000466285 NET1Q7Z628 596 aaPredicted RBP17.68■□□□□ 0.42
COL6A1-203ENST00000466285 CROCCP2Q86T23 111 aa17.68■□□□□ 0.42
COL6A1-203ENST00000466285 SKA3Q8IX90 412 aa17.68■□□□□ 0.42
COL6A1-203ENST00000466285 C10orf53Q8N6V4 93 aa17.68■□□□□ 0.42
COL6A1-203ENST00000466285 LRRC17Q8N6Y2 441 aa17.68■□□□□ 0.42
COL6A1-203ENST00000466285 ZNF540Q8NDQ6 660 aa17.68■□□□□ 0.42
COL6A1-203ENST00000466285 OR6N1Q8NGY5 312 aa17.68■□□□□ 0.42
COL6A1-203ENST00000466285 OR6S1Q8NH40 331 aa17.68■□□□□ 0.42
COL6A1-203ENST00000466285 GTF3AQ92664 365 aaKnown RBP17.68■□□□□ 0.42
COL6A1-203ENST00000466285 C7orf26Q96N11 449 aa17.68■□□□□ 0.42
COL6A1-203ENST00000466285 ASPNQ9BXN1 380 aa17.68■□□□□ 0.42
COL6A1-203ENST00000466285 TMEM38AQ9H6F2 299 aa17.68■□□□□ 0.42
COL6A1-203ENST00000466285 MOV10Q9HCE1 1003 aaKnown RBP17.68■□□□□ 0.42
COL6A1-203ENST00000466285 REV1Q9UBZ9 1251 aa17.68■□□□□ 0.42
COL6A1-203ENST00000466285 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.68■□□□□ 0.42
COL6A1-203ENST00000466285 GMEB1Q9Y692 573 aa17.68■□□□□ 0.42
COL6A1-203ENST00000466285 M0R233 179 aa17.67■□□□□ 0.42
COL6A1-203ENST00000466285 HAX1O00165 279 aa17.67■□□□□ 0.42
COL6A1-203ENST00000466285 SYNGR3O43761 229 aa17.67■□□□□ 0.42
COL6A1-203ENST00000466285 NAT2P11245 290 aa17.67■□□□□ 0.42
COL6A1-203ENST00000466285 CCL2P13500 99 aa17.67■□□□□ 0.42
COL6A1-203ENST00000466285 AHCYP23526 432 aa17.67■□□□□ 0.42
COL6A1-203ENST00000466285 CSNK1A1P48729 337 aa17.67■□□□□ 0.42
COL6A1-203ENST00000466285 DUSP7Q16829 419 aa17.67■□□□□ 0.42
COL6A1-203ENST00000466285 AGKQ53H12 422 aa17.67■□□□□ 0.42
COL6A1-203ENST00000466285 ARMC8Q8IUR7 673 aa17.67■□□□□ 0.42
COL6A1-203ENST00000466285 OR6T1Q8NGN1 323 aa17.67■□□□□ 0.42
COL6A1-203ENST00000466285 HPS1Q92902 700 aa17.67■□□□□ 0.42
COL6A1-203ENST00000466285 TMEM54Q969K7 222 aa17.67■□□□□ 0.42
COL6A1-203ENST00000466285 LRR1Q96L50 414 aa17.67■□□□□ 0.42
COL6A1-203ENST00000466285 TMEM43Q9BTV4 400 aa17.67■□□□□ 0.42
COL6A1-203ENST00000466285 OR51B6Q9H340 312 aa17.67■□□□□ 0.42
COL6A1-203ENST00000466285 POFUT2Q9Y2G5 429 aa17.67■□□□□ 0.42
COL6A1-203ENST00000466285 CORINQ9Y5Q5 1042 aa17.67■□□□□ 0.42
COL6A1-203ENST00000466285 NOX1Q9Y5S8 564 aa17.67■□□□□ 0.42
COL6A1-203ENST00000466285 CPSF4LA6NMK7 179 aaKnown RBP17.66■□□□□ 0.42
COL6A1-203ENST00000466285 KPNA4O00629 521 aaPredicted RBP17.66■□□□□ 0.42
COL6A1-203ENST00000466285 RGS9O75916 674 aaPredicted RBP17.66■□□□□ 0.42
COL6A1-203ENST00000466285 CLPTM1O96005 669 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms