RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 ARF1P84077 181 aaKnown RBP15.49■□□□□ 0.07
VPS52-214ENST00000463486 TGFBR3Q03167 851 aa15.49■□□□□ 0.07
VPS52-214ENST00000463486 HIST3H3Q16695 136 aa15.49■□□□□ 0.07
VPS52-214ENST00000463486 ARMC4Q5T2S8 1044 aa15.49■□□□□ 0.07
VPS52-214ENST00000463486 CARD17Q5XLA6 110 aa15.49■□□□□ 0.07
VPS52-214ENST00000463486 LRFN4Q6PJG9 635 aa15.49■□□□□ 0.07
VPS52-214ENST00000463486 ABHD12BQ7Z5M8 362 aaPredicted RBP15.49■□□□□ 0.07
VPS52-214ENST00000463486 CDH24Q86UP0 819 aa15.49■□□□□ 0.07
VPS52-214ENST00000463486 OR52N5Q8NH56 324 aa15.49■□□□□ 0.07
VPS52-214ENST00000463486 LILRB1Q8NHL6 650 aaPredicted RBP15.49■□□□□ 0.07
VPS52-214ENST00000463486 ADAD1Q96M93 576 aaKnown RBP15.49■□□□□ 0.07
VPS52-214ENST00000463486 TNFRSF13CQ96RJ3 184 aa15.49■□□□□ 0.07
VPS52-214ENST00000463486 GPA33Q99795 319 aa15.49■□□□□ 0.07
VPS52-214ENST00000463486 MRPL13Q9BYD1 178 aaKnown RBP15.49■□□□□ 0.07
VPS52-214ENST00000463486 CRLF2Q9HC73 371 aa15.49■□□□□ 0.07
VPS52-214ENST00000463486 PLCE1Q9P212 2302 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 SH3PXD2BA1X283 911 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 NPIPB13A6NJU9 1138 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 ZNF726A6NNF4 738 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 NPIPB4C9JG80 1138 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 M0R3G1 203 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 GSC2O15499 205 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 AKAP8O43823 692 aaKnown RBP15.48■□□□□ 0.07
VPS52-214ENST00000463486 PTP4A3O75365 173 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 FABP3P05413 133 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 PGA4P0DJD7 388 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 PGA3P0DJD8 388 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 CDH2P19022 906 aaPredicted RBP15.48■□□□□ 0.07
VPS52-214ENST00000463486 GPR4P46093 362 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 HMGA2P52926 109 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 TRAP1Q12931 704 aaKnown RBP15.48■□□□□ 0.07
VPS52-214ENST00000463486 MELKQ14680 651 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 ACKR1Q16570 336 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 CEACAM16Q2WEN9 425 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 DNAL1Q4LDG9 190 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 C1QTNF12Q5T7M4 302 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 ALKBH2Q6NS38 261 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 ZNF627Q7L945 461 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 SSX8Q7RTT4 187 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 ZDHHC21Q8IVQ6 265 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 OR4K5Q8NGD3 323 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 OR52J3Q8NH60 311 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 MAGEE2Q8TD90 523 aaPredicted RBP15.48■□□□□ 0.07
VPS52-214ENST00000463486 CCDC124Q96CT7 223 aaKnown RBP15.48■□□□□ 0.07
VPS52-214ENST00000463486 NMD3Q96D46 503 aaKnown RBP15.48■□□□□ 0.07
VPS52-214ENST00000463486 MUCL1Q96DR8 90 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 SLC25A44Q96H78 314 aaPredicted RBP15.48■□□□□ 0.07
VPS52-214ENST00000463486 CADM1Q9BY67 442 aaKnown RBP15.48■□□□□ 0.07
VPS52-214ENST00000463486 INIPQ9NRY2 104 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 ST6GALNAC2Q9UJ37 374 aa15.48■□□□□ 0.07
VPS52-214ENST00000463486 RAI1Q7Z5J4 1906 aaPredicted RBP15.48■□□□□ 0.07
VPS52-214ENST00000463486 TRAV27A0A087WT01 109 aa15.47■□□□□ 0.07
VPS52-214ENST00000463486 EFCAB9A8MZ26 197 aa15.47■□□□□ 0.07
VPS52-214ENST00000463486 CLOCKO15516 846 aa15.47■□□□□ 0.07
VPS52-214ENST00000463486 KRT33AO76009 404 aa15.47■□□□□ 0.07
VPS52-214ENST00000463486 SLC9A3P48764 834 aa15.47■□□□□ 0.07
VPS52-214ENST00000463486 NR1H2P55055 460 aa15.47■□□□□ 0.07
VPS52-214ENST00000463486 FXYD6P3P58550 94 aa15.47■□□□□ 0.07
VPS52-214ENST00000463486 BSPH1Q075Z2 132 aa15.47■□□□□ 0.07
VPS52-214ENST00000463486 TBRG1Q3YBR2 411 aa15.47■□□□□ 0.07
VPS52-214ENST00000463486 FGD3Q5JSP0 725 aa15.47■□□□□ 0.07
VPS52-214ENST00000463486 HMBOX1Q6NT76 420 aa15.47■□□□□ 0.07
VPS52-214ENST00000463486 ANKRD16Q6P6B7 361 aa15.47■□□□□ 0.07
VPS52-214ENST00000463486 ZER1Q7Z7L7 766 aa15.47■□□□□ 0.07
VPS52-214ENST00000463486 GPR137CQ8N3F9 429 aa15.47■□□□□ 0.07
VPS52-214ENST00000463486 OR13C2Q8NGS9 318 aa15.47■□□□□ 0.07
VPS52-214ENST00000463486 OR51A7Q8NH64 312 aa15.47■□□□□ 0.07
VPS52-214ENST00000463486 IGFBPL1Q8WX77 278 aa15.47■□□□□ 0.07
VPS52-214ENST00000463486 ASB10Q8WXI3 467 aa15.47■□□□□ 0.07
VPS52-214ENST00000463486 FAM46AQ96IP4 442 aaKnown RBP15.47■□□□□ 0.07
VPS52-214ENST00000463486 ZNF347Q96SE7 839 aa15.47■□□□□ 0.07
VPS52-214ENST00000463486 MAGIXQ9H6Y5 334 aa15.47■□□□□ 0.07
VPS52-214ENST00000463486 GLTPQ9NZD2 209 aa15.47■□□□□ 0.07
VPS52-214ENST00000463486 HIVEP1P15822 2718 aa15.46■□□□□ 0.07
VPS52-214ENST00000463486 ITPR3Q14573 2671 aa15.46■□□□□ 0.07
VPS52-214ENST00000463486 ARPC4-TTLL3A0A0A6YYG9 625 aa15.46■□□□□ 0.07
VPS52-214ENST00000463486 ZNF503-AS2A6NEH8 195 aa15.46■□□□□ 0.07
VPS52-214ENST00000463486 DNAJC8O75937 253 aaPredicted RBP15.46■□□□□ 0.07
VPS52-214ENST00000463486 ATE1O95260 518 aa15.46■□□□□ 0.07
VPS52-214ENST00000463486 BCL10O95999 233 aa15.46■□□□□ 0.07
VPS52-214ENST00000463486 IGHMP01871 453 aa15.46■□□□□ 0.07
VPS52-214ENST00000463486 SAGP10523 405 aaPredicted RBP15.46■□□□□ 0.07
VPS52-214ENST00000463486 CSNK1A1P48729 337 aa15.46■□□□□ 0.07
VPS52-214ENST00000463486 ZNF133P52736 654 aaPredicted RBP15.46■□□□□ 0.07
VPS52-214ENST00000463486 SH3BGRP55822 239 aaPredicted RBP15.46■□□□□ 0.07
VPS52-214ENST00000463486 ANKDD1AQ495B1 522 aa15.46■□□□□ 0.07
VPS52-214ENST00000463486 ALG10Q5BKT4 473 aa15.46■□□□□ 0.07
VPS52-214ENST00000463486 FBXW10Q5XX13 1052 aa15.46■□□□□ 0.07
VPS52-214ENST00000463486 ADAM5Q6NVV9 412 aa15.46■□□□□ 0.07
VPS52-214ENST00000463486 PAMR1Q6UXH9 720 aa15.46■□□□□ 0.07
VPS52-214ENST00000463486 ZNF704Q6ZNC4 412 aaPredicted RBP15.46■□□□□ 0.07
VPS52-214ENST00000463486 OAFQ86UD1 273 aa15.46■□□□□ 0.07
VPS52-214ENST00000463486 ADGRG5Q8IZF4 528 aa15.46■□□□□ 0.07
VPS52-214ENST00000463486 OR4C15Q8NGM1 316 aa15.46■□□□□ 0.07
VPS52-214ENST00000463486 MCUR1Q96AQ8 359 aa15.46■□□□□ 0.07
VPS52-214ENST00000463486 TXNIPQ9H3M7 391 aa15.46■□□□□ 0.07
VPS52-214ENST00000463486 NGBQ9NPG2 151 aa15.46■□□□□ 0.07
VPS52-214ENST00000463486 SIGLEC7Q9Y286 467 aa15.46■□□□□ 0.07
VPS52-214ENST00000463486 AMDHD2Q9Y303 409 aa15.46■□□□□ 0.07
VPS52-214ENST00000463486 A0A096LPE4 126 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms