RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 UBTFL1P0CB47 393 aaPredicted RBP2.11□□□□□ -2.07
HDAC6-212ENST00000461608 CHTF8P0CG12 524 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 PNMA6AP0CW24 399 aaPredicted RBP2.11□□□□□ -2.07
HDAC6-212ENST00000461608 RBMY1A1P0DJD3 496 aaKnown RBP2.11□□□□□ -2.07
HDAC6-212ENST00000461608 TOP1P11387 765 aaKnown RBP2.11□□□□□ -2.07
HDAC6-212ENST00000461608 SFTPCP11686 197 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 TDGF1P13385 188 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 CRISP2P16562 243 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 ZNF24P17028 368 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 ELK1P19419 428 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 GALP22466 123 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 AK4P27144 223 aaPredicted RBP2.11□□□□□ -2.07
HDAC6-212ENST00000461608 GSSP48637 474 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 CAV2P51636 162 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 TDGF1P3P51864 188 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 CDH6P55285 790 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 RGS8P57771 180 aaPredicted RBP2.11□□□□□ -2.07
HDAC6-212ENST00000461608 PRPS1P60891 318 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 RAB10P61026 200 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 PSG7Q13046 419 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 KIAA0087Q14695 138 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 HERPUD1Q15011 391 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 LRRC10Q5BKY1 277 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 LRRC66Q68CR7 880 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 CTRB2Q6GPI1 263 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 ZNF620Q6ZNG0 422 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 RFLNAQ6ZTI6 216 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 C20orf203Q8NBC4 194 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 SUMF2Q8NBJ7 301 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 FAM151AQ8WW52 585 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 ARPC1AQ92747 370 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 ELSPBP1Q96BH3 223 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 CYYR1Q96J86 154 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 PLEKHF1Q96S99 279 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 NRTNQ99748 197 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 TMEM59Q9BXS4 323 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 HES7Q9BYE0 225 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 NCOR1P1Q9H4R4 102 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 RNF167Q9H6Y7 350 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 ZNF160Q9HCG1 818 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 CCL28Q9NRJ3 127 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 ZNF225Q9UK10 706 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 CAB39Q9Y376 341 aaPredicted RBP2.11□□□□□ -2.07
HDAC6-212ENST00000461608 CSDC2Q9Y534 153 aaKnown RBP2.11□□□□□ -2.07
HDAC6-212ENST00000461608 NSD2O96028 1365 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 USP47Q96K76 1375 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 THSD7BQ9C0I4 1608 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 A0A0G2JN53 185 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 GJE1A6NN92 205 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 LRRIQ3A6PVS8 624 aaPredicted RBP2.1□□□□□ -2.07
HDAC6-212ENST00000461608 SIRPB1O00241 398 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 PEX7O00628 323 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 XKRYO14609 159 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 EIF3GO75821 320 aaKnown RBP eCLIP2.1□□□□□ -2.07
HDAC6-212ENST00000461608 H6PDO95479 791 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 FGFR1OPO95684 399 aaKnown RBP2.1□□□□□ -2.07
HDAC6-212ENST00000461608 ALDOBP05062 364 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 CSF3P09919 207 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 GKN3PP0CG01 181 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 SMIM10L1P0DMW3 83 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 NAA10P41227 235 aaPredicted RBP2.1□□□□□ -2.07
HDAC6-212ENST00000461608 SYKP43405 635 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 PRRX1P54821 245 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 YWHAGP61981 247 aaKnown RBP eCLIP2.1□□□□□ -2.07
HDAC6-212ENST00000461608 RPS15P62841 145 aaKnown RBP2.1□□□□□ -2.07
HDAC6-212ENST00000461608 GNB2P62879 340 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 ADARB1P78563 741 aaKnown RBP2.1□□□□□ -2.07
HDAC6-212ENST00000461608 ZNF92Q03936 586 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 DAZ2Q13117 558 aaKnown RBP2.1□□□□□ -2.07
HDAC6-212ENST00000461608 TMEM255AQ5JRV8 349 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 VAX1Q5SQQ9 334 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 C9orf135Q5VTT2 229 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 SLC8B1Q6J4K2 584 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 IL34Q6ZMJ4 242 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 COX15Q7KZN9 410 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 BZW1Q7L1Q6 419 aaKnown RBP2.1□□□□□ -2.07
HDAC6-212ENST00000461608 BIVMQ86UB2 503 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 LIX1Q8N485 282 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 OR2G3Q8NGZ4 309 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 PLPPR1Q8TBJ4 325 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 MCOLN3Q8TDD5 553 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 CXorf40AQ8TE69 158 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 CCDC126Q96EE4 140 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 PIK3IP1Q96FE7 263 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 SMIM10Q96HG1 83 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 ZIM3Q96PE6 472 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 MS4A4EQ96PG1 132 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 RASL11BQ9BPW5 248 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 MTG1Q9BT17 334 aaPredicted RBP2.1□□□□□ -2.07
HDAC6-212ENST00000461608 RACGAP1Q9H0H5 632 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 EML4Q9HC35 981 aaKnown RBP2.1□□□□□ -2.07
HDAC6-212ENST00000461608 DAZ3Q9NR90 486 aaKnown RBP2.1□□□□□ -2.07
HDAC6-212ENST00000461608 HOXC10Q9NYD6 342 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 IL17CQ9P0M4 197 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 CLCF1Q9UBD9 225 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 PACSIN2Q9UNF0 486 aaPredicted RBP2.1□□□□□ -2.07
HDAC6-212ENST00000461608 RLFQ13129 1914 aa2.1□□□□□ -2.07
HDAC6-212ENST00000461608 PINLYPA6NC86 204 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 NKX2-6A6NCS4 301 aa2.09□□□□□ -2.07
HDAC6-212ENST00000461608 NDUFAB1O14561 156 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms