RNA–Protein interactions for RNA: ENST00000460957.1

GGA1-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 790 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-216	ENST00000460957	DAP3	P51398	398 aa	Known RBP	13.92	□□□□□ -0.18
GGA1-216	ENST00000460957	RPS4X	P62701	263 aa	Known RBP	13.92	□□□□□ -0.18
GGA1-216	ENST00000460957	RPL18	Q07020	188 aa	Known RBP	13.92	□□□□□ -0.18
GGA1-216	ENST00000460957	TAF11	Q15544	211 aa		13.92	□□□□□ -0.18
GGA1-216	ENST00000460957	FGD3	Q5JSP0	725 aa		13.92	□□□□□ -0.18
GGA1-216	ENST00000460957	SHE	Q5VZ18	495 aa		13.92	□□□□□ -0.18
GGA1-216	ENST00000460957	LINGO2	Q7L985	606 aa		13.92	□□□□□ -0.18
GGA1-216	ENST00000460957	SLC46A3	Q7Z3Q1	461 aa		13.92	□□□□□ -0.18
GGA1-216	ENST00000460957	TMEM123	Q8N131	208 aa		13.92	□□□□□ -0.18
GGA1-216	ENST00000460957	FITM2	Q8N6M3	262 aa		13.92	□□□□□ -0.18
GGA1-216	ENST00000460957	OR6X1	Q8NH79	312 aa		13.92	□□□□□ -0.18
GGA1-216	ENST00000460957	SMAP2	Q8WU79	429 aa	Predicted RBP	13.92	□□□□□ -0.18
GGA1-216	ENST00000460957	NANOS1	Q8WY41	292 aa	Known RBP	13.92	□□□□□ -0.18
GGA1-216	ENST00000460957	BCL2L2	Q92843	193 aa	Predicted RBP	13.92	□□□□□ -0.18
GGA1-216	ENST00000460957	NEUROG1	Q92886	237 aa		13.92	□□□□□ -0.18
GGA1-216	ENST00000460957	CXXC4	Q9H2H0	198 aa		13.92	□□□□□ -0.18
GGA1-216	ENST00000460957	C20orf141	Q9NUB4	165 aa		13.92	□□□□□ -0.18
GGA1-216	ENST00000460957	DCAF13	Q9NV06	445 aa	Known RBP	13.92	□□□□□ -0.18
GGA1-216	ENST00000460957	STX18	Q9P2W9	335 aa	Known RBP	13.92	□□□□□ -0.18
GGA1-216	ENST00000460957	ADAM21	Q9UKJ8	722 aa		13.92	□□□□□ -0.18
GGA1-216	ENST00000460957	SNX13	Q9Y5W8	968 aa		13.92	□□□□□ -0.18
GGA1-216	ENST00000460957	ENPP4	Q9Y6X5	453 aa		13.92	□□□□□ -0.18
GGA1-216	ENST00000460957	TACC2	O95359	2948 aa		13.92	□□□□□ -0.18
GGA1-216	ENST00000460957	PRR14L	Q5THK1	2151 aa		13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	EFCAB9	A8MZ26	197 aa		13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	hCG_2039718	K7EN88	272 aa		13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	TMCC2	O75069	709 aa		13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	ENTPD5	O75356	428 aa		13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	SEC14L2	O76054	403 aa		13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	STAMBP	O95630	424 aa		13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	IGF2	P01344	180 aa		13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	IGHG1	P01857	330 aa		13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	H1F0	P07305	194 aa	Known RBP	13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	CALB2	P22676	271 aa		13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	AQP2	P41181	271 aa		13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	TUBA1B	P68363	451 aa		13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	TUBA4A	P68366	448 aa		13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	SEZ6L2	Q6UXD5	910 aa		13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	ZNF813	Q6ZN06	617 aa		13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	TUBA1A	Q71U36	451 aa		13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	NRM	Q8IXM6	262 aa		13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	CCDC36	Q8IYA8	594 aa		13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	RNF113B	Q8IZP6	322 aa	Known RBP	13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	FBXL14	Q8N1E6	418 aa		13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	LRRC75A-AS1	Q8N1F1	130 aa		13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	RBM15B	Q8NDT2	890 aa	Known RBP	13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	MAGEE2	Q8TD90	523 aa	Predicted RBP	13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	ACOT11	Q8WXI4	607 aa	Predicted RBP	13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	TRMT61A	Q96FX7	289 aa	Known RBP	13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	SLC25A44	Q96H78	314 aa	Predicted RBP	13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	SLC38A2	Q96QD8	506 aa		13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	GORASP2	Q9H8Y8	452 aa		13.91	□□□□□ -0.18
GGA1-216	ENST00000460957	CCDC168	Q8NDH2	2452 aa		13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	RAI1	Q7Z5J4	1906 aa	Predicted RBP	13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	HEATR1	Q9H583	2144 aa	Known RBP	13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	SHISA9	B4DS77	424 aa		13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	CRYAA	P02489	173 aa		13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	CD79A	P11912	226 aa		13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	CD99	P14209	185 aa		13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	RHCE	P18577	417 aa		13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	MSX2	P35548	267 aa	Predicted RBP	13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	FABP6	P51161	128 aa		13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	SPOCK1	Q08629	439 aa		13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	NPRL3	Q12980	569 aa		13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	TOP3A	Q13472	1001 aa	Predicted RBP	13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	SPATS1	Q496A3	300 aa		13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	ALG10	Q5BKT4	473 aa		13.9	□□□□□ -0.18
GGA1-216	ENST00000460957		Q5PR19	223 aa		13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	PHYHD1	Q5SRE7	291 aa		13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	AGAP6	Q5VW22	663 aa		13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	OAF	Q86UD1	273 aa		13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	TGIF2LY	Q8IUE0	185 aa		13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	BCAS4	Q8TDM0	211 aa		13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	PYURF	Q96I23	114 aa		13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	FOXB1	Q99853	325 aa		13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	GLTP	Q9NZD2	209 aa		13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	TMEM5	Q9Y2B1	443 aa		13.9	□□□□□ -0.18
GGA1-216	ENST00000460957	ARPC2	O15144	300 aa		13.89	□□□□□ -0.19
GGA1-216	ENST00000460957	FARS2	O95363	451 aa	Known RBP	13.89	□□□□□ -0.19
GGA1-216	ENST00000460957	NR2C1	P13056	603 aa		13.89	□□□□□ -0.19
GGA1-216	ENST00000460957	B4GALT1	P15291	398 aa		13.89	□□□□□ -0.19
GGA1-216	ENST00000460957	RPL4	P36578	427 aa	Known RBP	13.89	□□□□□ -0.19
GGA1-216	ENST00000460957	PTH2R	P49190	550 aa		13.89	□□□□□ -0.19
GGA1-216	ENST00000460957	ZNF84	P51523	738 aa		13.89	□□□□□ -0.19
GGA1-216	ENST00000460957	ATP5J2	P56134	94 aa		13.89	□□□□□ -0.19
GGA1-216	ENST00000460957	SMIM11A	P58511	58 aa		13.89	□□□□□ -0.19
GGA1-216	ENST00000460957	PRKCD	Q05655	676 aa		13.89	□□□□□ -0.19
GGA1-216	ENST00000460957	MBOAT2	Q6ZWT7	520 aa		13.89	□□□□□ -0.19
GGA1-216	ENST00000460957	LILRB1	Q8NHL6	650 aa	Predicted RBP	13.89	□□□□□ -0.19
GGA1-216	ENST00000460957	ZNF837	Q96EG3	531 aa	Predicted RBP	13.89	□□□□□ -0.19
GGA1-216	ENST00000460957	BOD1	Q96IK1	185 aa		13.89	□□□□□ -0.19
GGA1-216	ENST00000460957	DHRS9	Q9BPW9	319 aa		13.89	□□□□□ -0.19
GGA1-216	ENST00000460957	ANKRD19P	Q9H560	264 aa		13.89	□□□□□ -0.19
GGA1-216	ENST00000460957	NMNAT1	Q9HAN9	279 aa	Predicted RBP	13.89	□□□□□ -0.19
GGA1-216	ENST00000460957	MOK	Q9UQ07	419 aa		13.89	□□□□□ -0.19
GGA1-216	ENST00000460957	AURKC	Q9UQB9	309 aa		13.89	□□□□□ -0.19
GGA1-216	ENST00000460957	HRNR	Q86YZ3	2850 aa	Predicted RBP	13.89	□□□□□ -0.19
GGA1-216	ENST00000460957	CSMD2	Q7Z408	3487 aa		13.88	□□□□□ -0.19
GGA1-216	ENST00000460957	FFAR1	O14842	300 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms