RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 CDNFQ49AH0 187 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 ZNF584Q8IVC4 421 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 OR51D1Q8NGF3 324 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 COQ8AQ8NI60 647 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.64□□□□□ -0.71
NPHP4-204ENST00000460696 ELMOD3Q96FG2 381 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 METTL17Q9H7H0 456 aaPredicted RBP10.64□□□□□ -0.71
NPHP4-204ENST00000460696 ZMAT3Q9HA38 289 aaKnown RBP10.64□□□□□ -0.71
NPHP4-204ENST00000460696 NOX1Q9Y5S8 564 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 THSD7BQ9C0I4 1608 aa10.64□□□□□ -0.71
NPHP4-204ENST00000460696 CENPBD1B2RD01 187 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 PHYHO14832 338 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 ZNF749O43361 778 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 RFPL3O75679 317 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 TRAPPC6AO75865 159 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 PGAM2P15259 253 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 CAPZBP47756 277 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 LSSP48449 732 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 EEF1A1P68104 462 aaKnown RBP10.63□□□□□ -0.71
NPHP4-204ENST00000460696 GPR50Q13585 617 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 CDK5R1Q15078 307 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 FNDC1Q4ZHG4 1894 aaPredicted RBP10.63□□□□□ -0.71
NPHP4-204ENST00000460696 FAM180AQ6UWF9 173 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 FOXRED2Q8IWF2 684 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 ELMOD2Q8IZ81 293 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 SLC2A12Q8TD20 617 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 PRRG4Q9BZD6 226 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 MIXL1Q9H2W2 232 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 PRDM9Q9NQV7 894 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 TRAPPC4Q9Y296 219 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 SPTBN1Q01082 2364 aaKnown RBP10.63□□□□□ -0.71
NPHP4-204ENST00000460696 ARPC5O15511 151 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 ALDOBP05062 364 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 CRABP1P29762 137 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 NUDT1P36639 197 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 VEGFCP49767 419 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 RASGEF1BQ0VAM2 473 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 ALKBH1Q13686 389 aaKnown RBP10.63□□□□□ -0.71
NPHP4-204ENST00000460696 FZD2Q14332 565 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 GAB4Q2WGN9 574 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 EEF1A1P5Q5VTE0 462 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 PLCZ1Q86YW0 608 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 LINC00346Q8IVM7 164 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 OR5L2Q8NGL0 311 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 OR5H6Q8NGV6 325 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 NEK7Q8TDX7 302 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 PTP4A1Q93096 173 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 OR5B2Q96R09 309 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 SLC6A7Q99884 636 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 WDR77Q9BQA1 342 aaPredicted RBP10.63□□□□□ -0.71
NPHP4-204ENST00000460696 OR11A1Q9GZK7 315 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 PISDQ9UG56 409 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 TMED7-TICAM2A0A0A6YYA0 188 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 IDSB3KWA1 339 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 RGS19P49795 217 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 RPL18Q07020 188 aaKnown RBP10.63□□□□□ -0.71
NPHP4-204ENST00000460696 KCTD20Q7Z5Y7 419 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 DEFB124Q8NES8 71 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 SMIM19Q96E16 107 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 MSANTD3Q96H12 275 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 EVA1AQ9H8M9 152 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 ERVMER34-1Q9H9K5 563 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 TMED7Q9Y3B3 224 aa10.63□□□□□ -0.71
NPHP4-204ENST00000460696 FAM208BQ5VWN6 2430 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 DSPPQ9NZW4 1301 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 TMEM269A0A1B0GVZ9 245 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 TMEM229AB2RXF0 380 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 PSMB1P20618 241 aaKnown RBP10.62□□□□□ -0.71
NPHP4-204ENST00000460696 HLA-DMAP28067 261 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 ZNF79Q15937 498 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 C14orf28Q4W4Y0 310 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 YOD1Q5VVQ6 348 aaPredicted RBP10.62□□□□□ -0.71
NPHP4-204ENST00000460696 METTL11BQ5VVY1 283 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 NDUFAF7Q7L592 441 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 CMIPQ8IY22 773 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 PNLDC1Q8NA58 520 aaKnown RBP10.62□□□□□ -0.71
NPHP4-204ENST00000460696 OR56B4Q8NH76 319 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 WDFY2Q96P53 400 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 ALKBH4Q9NXW9 302 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 MOKQ9UQ07 419 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 V9GYH0 126 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 TSPAN4O14817 238 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 ICOSLGO75144 302 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 PLATP00750 562 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 NPR2P20594 1047 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 PSG6Q00889 435 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 GLYR1Q49A26 553 aaPredicted RBP10.62□□□□□ -0.71
NPHP4-204ENST00000460696 RAET1LQ5VY80 246 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 CBLN3Q6UW01 205 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 OR6F1Q8NGZ6 308 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 NPRL2Q8WTW4 380 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 PMM1Q92871 262 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 FAM71F1Q96KD3 344 aaPredicted RBP10.62□□□□□ -0.71
NPHP4-204ENST00000460696 WDR76Q9H967 626 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 COQ3Q9NZJ6 369 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 CAMK2AQ9UQM7 478 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 SDK2Q58EX2 2172 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 IGF2RP11717 2491 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 TRBV11-1A0A0K0K1C0 115 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 BLACEA4D250 179 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms