RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 CRNNQ9UBG3 495 aaPredicted RBP20.06■□□□□ 0.8
PTPN4-208ENST00000460289 IGHV1-18A0A0C4DH31 117 aa20.05■□□□□ 0.8
PTPN4-208ENST00000460289 HTR3EA5X5Y0 456 aa20.05■□□□□ 0.8
PTPN4-208ENST00000460289 CRYAAP02489 173 aa20.05■□□□□ 0.8
PTPN4-208ENST00000460289 IFNW1P05000 195 aa20.05■□□□□ 0.8
PTPN4-208ENST00000460289 FUT1P19526 365 aa20.05■□□□□ 0.8
PTPN4-208ENST00000460289 PSME3P61289 254 aa20.05■□□□□ 0.8
PTPN4-208ENST00000460289 GNGT1P63211 74 aa20.05■□□□□ 0.8
PTPN4-208ENST00000460289 SGTBQ96EQ0 304 aa20.05■□□□□ 0.8
PTPN4-208ENST00000460289 KCTD14Q9BQ13 255 aaPredicted RBP20.05■□□□□ 0.8
PTPN4-208ENST00000460289 KATNB1Q9BVA0 655 aa20.05■□□□□ 0.8
PTPN4-208ENST00000460289 ULBP2Q9BZM5 246 aa20.05■□□□□ 0.8
PTPN4-208ENST00000460289 GMPR2Q9P2T1 348 aaKnown RBP20.05■□□□□ 0.8
PTPN4-208ENST00000460289 MOKQ9UQ07 419 aa20.05■□□□□ 0.8
PTPN4-208ENST00000460289 POFUT2Q9Y2G5 429 aa20.05■□□□□ 0.8
PTPN4-208ENST00000460289 MED31Q9Y3C7 131 aa20.05■□□□□ 0.8
PTPN4-208ENST00000460289 FAM171A2A8MVW0 826 aa20.04■□□□□ 0.8
PTPN4-208ENST00000460289 BLOC1S5-TXNDC5H3BN57 136 aa20.04■□□□□ 0.8
PTPN4-208ENST00000460289 ZNF682O95780 498 aa20.04■□□□□ 0.8
PTPN4-208ENST00000460289 CBR1P16152 277 aa20.04■□□□□ 0.8
PTPN4-208ENST00000460289 APOBEC3AP31941 199 aaPredicted RBP20.04■□□□□ 0.8
PTPN4-208ENST00000460289 CSNK1A1P48729 337 aa20.04■□□□□ 0.8
PTPN4-208ENST00000460289 UGT2B15P54855 530 aa20.04■□□□□ 0.8
PTPN4-208ENST00000460289 B3GLCTQ6Y288 498 aa20.04■□□□□ 0.8
PTPN4-208ENST00000460289 CBLL1Q75N03 491 aa20.04■□□□□ 0.8
PTPN4-208ENST00000460289 SLC46A3Q7Z3Q1 461 aa20.04■□□□□ 0.8
PTPN4-208ENST00000460289 PFN4Q8NHR9 129 aa20.04■□□□□ 0.8
PTPN4-208ENST00000460289 PRRC1Q96M27 445 aa20.04■□□□□ 0.8
PTPN4-208ENST00000460289 HEATR1Q9H583 2144 aaKnown RBP20.04■□□□□ 0.8
PTPN4-208ENST00000460289 SPAG4Q9NPE6 437 aa20.04■□□□□ 0.8
PTPN4-208ENST00000460289 ABCD2Q9UBJ2 740 aa20.04■□□□□ 0.8
PTPN4-208ENST00000460289 A4GNTQ9UNA3 340 aa20.04■□□□□ 0.8
PTPN4-208ENST00000460289 ATP6V1G2-DDX39BF2Z307 99 aa20.03■□□□□ 0.8
PTPN4-208ENST00000460289 H7C1Q1 480 aa20.03■□□□□ 0.8
PTPN4-208ENST00000460289 OR7A10O76100 309 aa20.03■□□□□ 0.8
PTPN4-208ENST00000460289 IGKV3-15P01624 115 aa20.03■□□□□ 0.8
PTPN4-208ENST00000460289 BMP4P12644 408 aa20.03■□□□□ 0.8
PTPN4-208ENST00000460289 ARR3P36575 388 aa20.03■□□□□ 0.8
PTPN4-208ENST00000460289 GYS2P54840 703 aa20.03■□□□□ 0.8
PTPN4-208ENST00000460289 TUBA1BP68363 451 aa20.03■□□□□ 0.8
PTPN4-208ENST00000460289 TUBA4AP68366 448 aa20.03■□□□□ 0.8
PTPN4-208ENST00000460289 IFI44LQ53G44 452 aa20.03■□□□□ 0.8
PTPN4-208ENST00000460289 TUBA1AQ71U36 451 aa20.03■□□□□ 0.8
PTPN4-208ENST00000460289 FKBP9P1Q75LS8 142 aa20.03■□□□□ 0.8
PTPN4-208ENST00000460289 ZNF627Q7L945 461 aa20.03■□□□□ 0.8
PTPN4-208ENST00000460289 VTCN1Q7Z7D3 282 aa20.03■□□□□ 0.8
PTPN4-208ENST00000460289 LIPHQ8WWY8 451 aa20.03■□□□□ 0.8
PTPN4-208ENST00000460289 GEMIN6Q8WXD5 167 aaKnown RBP20.03■□□□□ 0.8
PTPN4-208ENST00000460289 ZNF566Q969W8 418 aa20.03■□□□□ 0.8
PTPN4-208ENST00000460289 SLC25A44Q96H78 314 aaPredicted RBP20.03■□□□□ 0.8
PTPN4-208ENST00000460289 COX4I2Q96KJ9 171 aa20.03■□□□□ 0.8
PTPN4-208ENST00000460289 GSX1Q9H4S2 264 aaPredicted RBP20.03■□□□□ 0.8
PTPN4-208ENST00000460289 BARX1Q9HBU1 254 aaPredicted RBP20.03■□□□□ 0.8
PTPN4-208ENST00000460289 ALPK2Q86TB3 2170 aa20.02■□□□□ 0.8
PTPN4-208ENST00000460289 TRIM64A6NGJ6 449 aa20.02■□□□□ 0.8
PTPN4-208ENST00000460289 TRIM64BA6NI03 449 aa20.02■□□□□ 0.8
PTPN4-208ENST00000460289 BCL10O95999 233 aa20.02■□□□□ 0.8
PTPN4-208ENST00000460289 SERPINA1P01009 418 aa20.02■□□□□ 0.8
PTPN4-208ENST00000460289 IGLV1-44P01699 117 aa20.02■□□□□ 0.8
PTPN4-208ENST00000460289 CAPZA2P47755 286 aa20.02■□□□□ 0.8
PTPN4-208ENST00000460289 TMEM54Q969K7 222 aa20.02■□□□□ 0.8
PTPN4-208ENST00000460289 FAM162AQ96A26 154 aa20.02■□□□□ 0.8
PTPN4-208ENST00000460289 FNDC11Q9BVV2 318 aa20.02■□□□□ 0.8
PTPN4-208ENST00000460289 C20orf141Q9NUB4 165 aa20.02■□□□□ 0.8
PTPN4-208ENST00000460289 GLTPQ9NZD2 209 aa20.02■□□□□ 0.8
PTPN4-208ENST00000460289 ARL2BPQ9Y2Y0 163 aa20.02■□□□□ 0.8
PTPN4-208ENST00000460289 A0A1W2PRG6 482 aa20.01■□□□□ 0.79
PTPN4-208ENST00000460289 CECR9P0C854 216 aa20.01■□□□□ 0.79
PTPN4-208ENST00000460289 NAAAQ02083 359 aa20.01■□□□□ 0.79
PTPN4-208ENST00000460289 CHRNB3Q05901 458 aa20.01■□□□□ 0.79
PTPN4-208ENST00000460289 CLEC12BQ2HXU8 276 aa20.01■□□□□ 0.79
PTPN4-208ENST00000460289 C11orf71Q6IPW1 123 aa20.01■□□□□ 0.79
PTPN4-208ENST00000460289 ZNF813Q6ZN06 617 aa20.01■□□□□ 0.79
PTPN4-208ENST00000460289 PIGWQ7Z7B1 504 aa20.01■□□□□ 0.79
PTPN4-208ENST00000460289 WDFY1Q8IWB7 410 aa20.01■□□□□ 0.79
PTPN4-208ENST00000460289 IL17RDQ8NFM7 739 aa20.01■□□□□ 0.79
PTPN4-208ENST00000460289 FOXB1Q99853 325 aa20.01■□□□□ 0.79
PTPN4-208ENST00000460289 CACNG6Q9BXT2 260 aa20.01■□□□□ 0.79
PTPN4-208ENST00000460289 SETD2Q9BYW2 2564 aaPredicted RBP20.01■□□□□ 0.79
PTPN4-208ENST00000460289 PLCE1Q9P212 2302 aa20.01■□□□□ 0.79
PTPN4-208ENST00000460289 GMNNO75496 209 aa20■□□□□ 0.79
PTPN4-208ENST00000460289 SEC14L2O76054 403 aa20■□□□□ 0.79
PTPN4-208ENST00000460289 IGHV4-39P01824 125 aa20■□□□□ 0.79
PTPN4-208ENST00000460289 YAP1P46937 504 aaKnown RBP20■□□□□ 0.79
PTPN4-208ENST00000460289 RPL18Q07020 188 aaKnown RBP20■□□□□ 0.79
PTPN4-208ENST00000460289 TRAM2Q15035 370 aa20■□□□□ 0.79
PTPN4-208ENST00000460289 PIWIL3Q7Z3Z3 882 aaKnown RBP20■□□□□ 0.79
PTPN4-208ENST00000460289 HDDC2Q7Z4H3 204 aa20■□□□□ 0.79
PTPN4-208ENST00000460289 OFCC1Q8IZS5 231 aa20■□□□□ 0.79
PTPN4-208ENST00000460289 CIARTQ8N365 385 aaPredicted RBP20■□□□□ 0.79
PTPN4-208ENST00000460289 OR4F15Q8NGB8 312 aa20■□□□□ 0.79
PTPN4-208ENST00000460289 NANOS1Q8WY41 292 aaKnown RBP20■□□□□ 0.79
PTPN4-208ENST00000460289 HSH2DQ96JZ2 352 aa20■□□□□ 0.79
PTPN4-208ENST00000460289 LRRC37BQ96QE4 947 aa20■□□□□ 0.79
PTPN4-208ENST00000460289 INIPQ9NRY2 104 aa20■□□□□ 0.79
PTPN4-208ENST00000460289 ADA2Q9NZK5 511 aa20■□□□□ 0.79
PTPN4-208ENST00000460289 RPS6KA6Q9UK32 745 aa20■□□□□ 0.79
PTPN4-208ENST00000460289 SNX13Q9Y5W8 968 aa20■□□□□ 0.79
PTPN4-208ENST00000460289 PMF1-BGLAPU3KQ54 211 aa20■□□□□ 0.79
PTPN4-208ENST00000460289 ENTPD5O75356 428 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms