RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 CSNK1A1P48729 337 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 GBX2P52951 348 aaPredicted RBP5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 SLC25A1P53007 311 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 CLDN17P56750 224 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 ADAM8P78325 824 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 SLC35A2P78381 396 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 TGFBR3Q03167 851 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 CRMP1Q14194 572 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 SPHARQ15513 63 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 TRAM1Q15629 374 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 INPP5JQ15735 1006 aaPredicted RBP5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 EIF2S3LQ2VIR3 472 aaKnown RBP5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 CTU2Q2VPK5 515 aaKnown RBP5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 OR2A2Q6IF42 318 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 RPUSD3Q6P087 351 aaKnown RBP5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 KLHL24Q6TFL4 600 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 IGFL2Q6UWQ7 119 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 ZNF367Q7RTV3 350 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 SLC46A3Q7Z3Q1 461 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 EGFL6Q8IUX8 553 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 GHDCQ8N2G8 530 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 UBE2J2Q8N2K1 259 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 TMEM251Q8N6I4 163 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 CYB561A3Q8NBI2 242 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 OR6X1Q8NH79 312 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 OR10D3Q8NH80 312 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 FBLIM1Q8WUP2 373 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 THEM6Q8WUY1 208 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 ASB17Q8WXJ9 295 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 ZCCHC14Q8WYQ9 949 aaKnown RBP5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 THRSPQ92748 146 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 GGHQ92820 318 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 RELTQ969Z4 430 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 Q96M85 177 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 INTS14Q96SY0 518 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 GPA33Q99795 319 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 TM9SF2Q99805 663 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 ALG12Q9BV10 488 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 CDCA4Q9BXL8 241 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 RSPO3Q9BXY4 272 aaPredicted RBP5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 MROQ9BYG7 248 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 ENKD1Q9H0I2 346 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 TRIM36Q9NQ86 728 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 DEPPQ9NTK1 212 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 TAS2R5Q9NYW4 299 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 ERVK-18Q9QC07 812 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 SEC14L4Q9UDX3 406 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 TUBD1Q9UJT1 453 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 DIMT1Q9UNQ2 313 aaKnown RBP5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 CAB39Q9Y376 341 aaPredicted RBP5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 EMC9Q9Y3B6 208 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 ADAM18Q9Y3Q7 739 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 NCKAP5O14513 1909 aa5.24□□□□□ -1.57
RNU1-88P-201ENST00000459274 URB1O60287 2271 aaKnown RBP5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 A0A1W2PPL8 197 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 SLC35F4A4IF30 521 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 SLC22A20A6NK97 555 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 SHISA8B8ZZ34 492 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 MS4A18H0YCH9 400 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 PRRG2O14669 202 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 WBP4O75554 376 aaKnown RBP5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 SERPINA3P01011 423 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 IGHMP01871 453 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 IGFBP1P08833 259 aaPredicted RBP5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 RFPL3SP0C7P2 107 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 CPN1P15169 458 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 SPI1P17947 270 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 NPR2P20594 1047 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 PTGER4P35408 488 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 SOX6P35712 828 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 CD97P48960 835 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 STARP49675 285 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 AGFG1P52594 562 aaKnown RBP5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 CDH15P55291 814 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 WNT4P56705 351 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 PCBD1P61457 104 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 LSM11P83369 360 aaKnown RBP eCLIP5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 PLAURQ03405 335 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 EMX1Q04741 257 aaPredicted RBP5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 ZNF91Q05481 1191 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 CAMK2DQ13557 499 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 POU4F3Q15319 338 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 TBCEQ15813 527 aaPredicted RBP5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 SMN1Q16637 294 aaKnown RBP5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 TBR1Q16650 682 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 TIGD6Q17RP2 521 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 MS4A18Q3C1V0 323 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 C1QL3Q5VWW1 255 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 CARD17Q5XLA6 110 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 VASNQ6EMK4 673 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 SLC18B1Q6NT16 456 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 NIPAL3Q6P499 406 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 UNQ6494/PRO21346Q6UXR6 183 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 THSD4Q6ZMP0 1018 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 SLC16A9Q7RTY1 509 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 KRT77Q7Z794 578 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 LUZP2Q86TE4 346 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 ERI1Q8IV48 349 aaKnown RBP5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 GLB1L2Q8IW92 636 aa5.23□□□□□ -1.57
RNU1-88P-201ENST00000459274 SLC35F2Q8IXU6 374 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms