RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 C17orf51A8MQB3 221 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 RAD1O60671 282 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 ZFPL1O95159 310 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 NSA2O95478 260 aaKnown RBP11.3□□□□□ -0.6
LINC00959-201ENST00000456581 ACSM4P0C7M7 580 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 SRMP19623 302 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 CSF2RBP32927 897 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 CSRP2Q16527 193 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 LINC00303Q3SY05 128 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 YOD1Q5VVQ6 348 aaPredicted RBP11.3□□□□□ -0.6
LINC00959-201ENST00000456581 SPEM1Q8N4L4 309 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 SFXN2Q96NB2 322 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 DGAT2Q96PD7 388 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 KLHDC3Q9BQ90 382 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 MESP1Q9BRJ9 268 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 ULBP3Q9BZM4 244 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 CLEC4MQ9H2X3 399 aaPredicted RBP11.3□□□□□ -0.6
LINC00959-201ENST00000456581 NCDNQ9UBB6 729 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 MGAT4CQ9UBM8 478 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 SATB2Q9UPW6 733 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 KLHDC2Q9Y2U9 406 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 AUP1Q9Y679 476 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 A0A1W2PPL8 197 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 K7ESF4 209 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 BCAT2O15382 392 aaPredicted RBP11.29□□□□□ -0.6
LINC00959-201ENST00000456581 KHDRBS3O75525 346 aaKnown RBP11.29□□□□□ -0.6
LINC00959-201ENST00000456581 ICAM2P13598 275 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 ACAA2P42765 397 aaKnown RBP11.29□□□□□ -0.6
LINC00959-201ENST00000456581 GPR3P46089 330 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 ZNHIT3Q15649 155 aaPredicted RBP11.29□□□□□ -0.6
LINC00959-201ENST00000456581 C1orf189Q5VU69 101 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 OR4D10Q8NGI6 311 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 OR10AC1Q8NH08 325 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 COQ8AQ8NI60 647 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 STK35Q8TDR2 534 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 ELMOD3Q96FG2 381 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 CNN2Q99439 309 aaKnown RBP11.29□□□□□ -0.6
LINC00959-201ENST00000456581 GAL3ST1Q99999 423 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 CHRDQ9H2X0 955 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 TMEM27Q9HBJ8 222 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 PNO1Q9NRX1 252 aaKnown RBP11.29□□□□□ -0.6
LINC00959-201ENST00000456581 WNT16Q9UBV4 365 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 CHRNA9Q9UGM1 479 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 H3BUI4 141 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 M0R233 179 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 FMO6PO60774 539 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 PEX14O75381 377 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 PDGFBP01127 241 aaPredicted RBP11.29□□□□□ -0.6
LINC00959-201ENST00000456581 OR8G3PP0DMU2 310 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 FOLR1P15328 257 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 FOSL2P15408 326 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 LCN1P31025 176 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 HSF2Q03933 536 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 ZCCHC12Q6PEW1 402 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 ATRAIDQ6UW56 229 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 OR56B4Q8NH76 319 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 Q96M85 177 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 NRSN2Q9GZP1 204 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 CAMK2AQ9UQM7 478 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 NPFFR2Q9Y5X5 522 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 KCNMB2Q9Y691 235 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 MED12Q93074 2177 aa11.29□□□□□ -0.6
LINC00959-201ENST00000456581 IGHV1OR21-1A0A087WYE8 117 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 CDC14CA4D256 554 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 CLDN4O14493 209 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 GIMD1P0DJR0 217 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 PTGS2P35354 604 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 GBX2P52951 348 aaPredicted RBP11.28□□□□□ -0.6
LINC00959-201ENST00000456581 VWA2Q5GFL6 755 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 TMEM81Q6P7N7 255 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 OGFOD3Q6PK18 319 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 SHISA6Q6ZSJ9 500 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 GRAMD2AQ8IUY3 354 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 OR51A4Q8NGJ6 313 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 MOSPD2Q8NHP6 518 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 SYNPRQ8TBG9 265 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.28□□□□□ -0.6
LINC00959-201ENST00000456581 REG4Q9BYZ8 158 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 OR10A5Q9H207 317 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 NRIP3Q9NQ35 241 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 UBQLN2Q9UHD9 624 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 MOKQ9UQ07 419 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 OR10H1Q9Y4A9 318 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 TTC28Q96AY4 2481 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 TVP23AA6NH52 213 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 BLOC1S5-TXNDC5H3BN57 136 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 HOXD4P09016 255 aaPredicted RBP11.28□□□□□ -0.6
LINC00959-201ENST00000456581 FBXO45P0C2W1 286 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 RRASP10301 218 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 CXCL12P48061 93 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 COL28A1Q2UY09 1125 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 TMPRSS9Q7Z410 1059 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.28□□□□□ -0.6
LINC00959-201ENST00000456581 PRR22Q8IZ63 422 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 RNF113BQ8IZP6 322 aaKnown RBP11.28□□□□□ -0.6
LINC00959-201ENST00000456581 OR1L3Q8NH93 324 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 HGDQ93099 445 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 RNF166Q96A37 237 aaPredicted RBP11.28□□□□□ -0.6
LINC00959-201ENST00000456581 ZNF524Q96C55 264 aa11.28□□□□□ -0.6
LINC00959-201ENST00000456581 ZNF285Q96NJ3 590 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms